Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g013080.3.1
CDS Infomation

Alpha-carboxyltransferase subunit (AHRD V3.3 *** C9EI97_JATCU)
Sequence

ATGGCTTCAACTTCACATCCTCCCGTGGCATTCAGTGGAAGTTTGGCTTCTAAAACTTCA
GCTTCAGACCTTCTTCGTAGCTCAAGAAATGGTGTTTGTGGTGTGCCATTGAAAACCTTA
GGGAGAGCACAATTGGGTTCTAAGAAGAGAGATTTTACAATCTCTGCCAAGGTTAGAAAG
GTAAAGAAGCACGAGTACCCCTGGCCAGAGGATCCTGACCTTAATGTCAAGGGTGGAGTC
CTCAGTCACTTATCACCTTTCAAGCCATTGAAAGAAAAGCCAAAACCGGTGACTTTGGAT
TTTGAGAAACCTCTCATGGATCTGCAGAAAAAAATCATTGATGTTCAAAAGATGGCAAAT
GAAACTGGGTTGGATTTCAGTGATCAAATTATCTCACTTGAGAACAAATACCAACAGGCT
CTAAAAGATCTATACACACATCTGACTCCTATACAACGAGTGAATATTGCAAGGCATCCT
AACAGGCCAACTTTCCTTGATCATATCTTTAATATTACTGAGAAGTTTGTGGAGCTTCAT
GGTGACCGAGCTGGGTATGACGATCCTGCCATTGTCACTGGACTTGGCACAATAAATGGT
AGAAGCTATATGTTTATGGGTCATCAAAAAGGACGAAACACAAAGGAGAACATACAACGT
AACTTTGGGATGCCTACTCCCCATGGTTATAGGAAGGCTCTGCGGATGATGTACTATGCT
GATCATCACGGATTCCCGATCATCACTTTCATTGACACACCAGGGGCATATGCTGATCTC
AAATCAGAGGAACTAGGTCAAGGAGAAGCCATAGCTCATAACTTGAGGAGTATGTTTGGT
TTGAAAGTACCAATTATTTCTATTGTTATGGGAGAAGGGGGTTCTGGTGGAGCTCTGGCT
ATTGGTTGTGCTAATAAATTGTTGATGCTTGAAAATGCTGTCTTCTATGTTGCCAGCCCA
GAAGCATGTGCAGCAATTTTGTGGAAGACTGCAAAAGCTTCTCCTAAGGCAGCTGAGAAA
CTCAAGATAACAGCTCAAGAGCTGTGCAGGCTTCAAATTGCTGATGGTTCCATCCCTGAG
CCTCTTGGTGGTGCACATGCTGATCCGTATTGGACTTCACAGCAGATAAAAATTGCTATT
GAAGAATCAATGGATGAACTTACAAAAATGGACACCCAAGAGTTGTTAAGGCACAGGATG
CTAAAGTTCCGAAAACTTGGTGGCTTCCAGGAGGGAGTTCCCATTGATCCAAAAAGGAAG
GTCAACATGAAAAAGAAAGAAGAACCTCTTCTTCCACCTGGAATTCCGGATGTGGAATTA
ATGGATGAGGTTGAGAAATTGAAGCAGGAGATCCTGAAAGCAACGGAATCAACTGGGAAG
ATTCCAGACACAGGCCTGAATGAGATGATAGAAAAATTAAGAAGAGAAATTGATTATGAA
TTTTCTGAGGCTGTTAAAGCTTTGGGTTTGGAGGAAAAACTTGTCATGGCGCGAGAAGAA
TTTGCAAAAACAAGGAACTCAAATGACCAGTCAATGCATCCTGTTCTGAAGGAAAAACTT
GACCAGCTTAAGGATGAATTCAACAGAAACATTTCTGCTGCTCCAAATTATGCTAGCCTA
ACGAATAAGCTTGAGATGTTGCAAGAAATGTCTAAAGCCCAGAAACTCTCAGAGAAATAT
AGCAAGGTAAACAACTTGAAGGAGGAGATCAATAAGAGGTTAAAAGAAGTCATGAACCGC
CCAGATTTGAAGGAGAAGATGGACGCATTGAAGGCTGAGATCAAGAGTACTGGTGTATCG
AGAGTCATGGATCTAGACCAGGGGATAAAGGATAAACTTGTGCAACTGAAGGATGAAATA
TGTATGGAATTTTCTGGTGTTTTCGAATCCCTAGGCTTAAACGTCAACCCAGCATCACTT
CCTACTGATGCCAAGAGAAGAATCAATGAATTTAACAATGAAATTACAACGGTTATGGAA
GACCTCGTGAACTCCACGGATTTGAAAAACAAGATTGAGTTGTTAAAGATGGAGGTAACA
AAGGCTGGAAAGACAGCAGATGCTGAGTCAAAGGCAAAAATTCAGGCCTTAGAACAGCAA
ATAAAGCAAAGTCTTGCACAGGCTATGAGTTTTCCAGAGTTAAAGGAGAAACACGAGAAG
CTGAAGGAAGAGATTGTGGAAACCATTGAATCCCTTCAAGGATCCAATGGAAGTTTGCTA
GCAGATAACGGTGGTGCCAATTCAGGAGTAGGAGTAAATGTAGATGCAAACCGTAGCTTT
GCCTGA

Peptide Sequence

PEP ID

Solyc09g013080.3.1
PEP Infomation

Alpha-carboxyltransferase subunit (AHRD V3.3 *** C9EI97_JATCU)
Sequence

MASTSHPPVAFSGSLASKTSASDLLRSSRNGVCGVPLKTLGRAQLGSKKRDFTISAKVRK
VKKHEYPWPEDPDLNVKGGVLSHLSPFKPLKEKPKPVTLDFEKPLMDLQKKIIDVQKMAN
ETGLDFSDQIISLENKYQQALKDLYTHLTPIQRVNIARHPNRPTFLDHIFNITEKFVELH
GDRAGYDDPAIVTGLGTINGRSYMFMGHQKGRNTKENIQRNFGMPTPHGYRKALRMMYYA
DHHGFPIITFIDTPGAYADLKSEELGQGEAIAHNLRSMFGLKVPIISIVMGEGGSGGALA
IGCANKLLMLENAVFYVASPEACAAILWKTAKASPKAAEKLKITAQELCRLQIADGSIPE
PLGGAHADPYWTSQQIKIAIEESMDELTKMDTQELLRHRMLKFRKLGGFQEGVPIDPKRK
VNMKKKEEPLLPPGIPDVELMDEVEKLKQEILKATESTGKIPDTGLNEMIEKLRREIDYE
FSEAVKALGLEEKLVMAREEFAKTRNSNDQSMHPVLKEKLDQLKDEFNRNISAAPNYASL
TNKLEMLQEMSKAQKLSEKYSKVNNLKEEINKRLKEVMNRPDLKEKMDALKAEIKSTGVS
RVMDLDQGIKDKLVQLKDEICMEFSGVFESLGLNVNPASLPTDAKRRINEFNNEITTVME
DLVNSTDLKNKIELLKMEVTKAGKTADAESKAKIQALEQQIKQSLAQAMSFPELKEKHEK
LKEEIVETIESLQGSNGSLLADNGGANSGVGVNVDANRSFA*

Transcript Sequence

Transcript ID

Solyc09g013080.3.1
Transcript Infomation

Alpha-carboxyltransferase subunit (AHRD V3.3 *** C9EI97_JATCU)
Sequence

CAAATTAAAATAAACAATATTTTTATTTTTTTAATGAAAAATATGGATACGATTATACAA
GTTCAGAAAAATACAAAGCTTTATGACGCAACAGAGAGTTGAACACATTTAACGGCCAAA
CCGAGAAACACTGTCACACAAGCACACTGGTAGGTTTTAATTTATTTATTTATTTTCCAC
TCTTCCCATTTTACCCTTTCCCTTTTTTCTTTTTTCTCATTTTTAGTCCTCCGCATAAGA
AGTATCGAAAACTCAAAATCAAAAACCATCTCATAATAAACAGCTTCTTCTACATAGCTT
TTATCTATCTCATTTGTTGAAAAAACCCAAGCCCTCTTTTCGATCTTCTCGATGCTCTTT
TCTCCTTAGAACAATACTACTAAATCTTCTCTTCTCATCCATTCCTCAGATCTCTTCTGC
TTGAATCTGGAGCTCTCATTCTCGTAACTGGAGAATGGCTTCAACTTCACATCCTCCCGT
GGCATTCAGTGGAAGTTTGGCTTCTAAAACTTCAGCTTCAGACCTTCTTCGTAGCTCAAG
AAATGGTGTTTGTGGTGTGCCATTGAAAACCTTAGGGAGAGCACAATTGGGTTCTAAGAA
GAGAGATTTTACAATCTCTGCCAAGGTTAGAAAGGTAAAGAAGCACGAGTACCCCTGGCC
AGAGGATCCTGACCTTAATGTCAAGGGTGGAGTCCTCAGTCACTTATCACCTTTCAAGCC
ATTGAAAGAAAAGCCAAAACCGGTGACTTTGGATTTTGAGAAACCTCTCATGGATCTGCA
GAAAAAAATCATTGATGTTCAAAAGATGGCAAATGAAACTGGGTTGGATTTCAGTGATCA
AATTATCTCACTTGAGAACAAATACCAACAGGCTCTAAAAGATCTATACACACATCTGAC
TCCTATACAACGAGTGAATATTGCAAGGCATCCTAACAGGCCAACTTTCCTTGATCATAT
CTTTAATATTACTGAGAAGTTTGTGGAGCTTCATGGTGACCGAGCTGGGTATGACGATCC
TGCCATTGTCACTGGACTTGGCACAATAAATGGTAGAAGCTATATGTTTATGGGTCATCA
AAAAGGACGAAACACAAAGGAGAACATACAACGTAACTTTGGGATGCCTACTCCCCATGG
TTATAGGAAGGCTCTGCGGATGATGTACTATGCTGATCATCACGGATTCCCGATCATCAC
TTTCATTGACACACCAGGGGCATATGCTGATCTCAAATCAGAGGAACTAGGTCAAGGAGA
AGCCATAGCTCATAACTTGAGGAGTATGTTTGGTTTGAAAGTACCAATTATTTCTATTGT
TATGGGAGAAGGGGGTTCTGGTGGAGCTCTGGCTATTGGTTGTGCTAATAAATTGTTGAT
GCTTGAAAATGCTGTCTTCTATGTTGCCAGCCCAGAAGCATGTGCAGCAATTTTGTGGAA
GACTGCAAAAGCTTCTCCTAAGGCAGCTGAGAAACTCAAGATAACAGCTCAAGAGCTGTG
CAGGCTTCAAATTGCTGATGGTTCCATCCCTGAGCCTCTTGGTGGTGCACATGCTGATCC
GTATTGGACTTCACAGCAGATAAAAATTGCTATTGAAGAATCAATGGATGAACTTACAAA
AATGGACACCCAAGAGTTGTTAAGGCACAGGATGCTAAAGTTCCGAAAACTTGGTGGCTT
CCAGGAGGGAGTTCCCATTGATCCAAAAAGGAAGGTCAACATGAAAAAGAAAGAAGAACC
TCTTCTTCCACCTGGAATTCCGGATGTGGAATTAATGGATGAGGTTGAGAAATTGAAGCA
GGAGATCCTGAAAGCAACGGAATCAACTGGGAAGATTCCAGACACAGGCCTGAATGAGAT
GATAGAAAAATTAAGAAGAGAAATTGATTATGAATTTTCTGAGGCTGTTAAAGCTTTGGG
TTTGGAGGAAAAACTTGTCATGGCGCGAGAAGAATTTGCAAAAACAAGGAACTCAAATGA
CCAGTCAATGCATCCTGTTCTGAAGGAAAAACTTGACCAGCTTAAGGATGAATTCAACAG
AAACATTTCTGCTGCTCCAAATTATGCTAGCCTAACGAATAAGCTTGAGATGTTGCAAGA
AATGTCTAAAGCCCAGAAACTCTCAGAGAAATATAGCAAGGTAAACAACTTGAAGGAGGA
GATCAATAAGAGGTTAAAAGAAGTCATGAACCGCCCAGATTTGAAGGAGAAGATGGACGC
ATTGAAGGCTGAGATCAAGAGTACTGGTGTATCGAGAGTCATGGATCTAGACCAGGGGAT
AAAGGATAAACTTGTGCAACTGAAGGATGAAATATGTATGGAATTTTCTGGTGTTTTCGA
ATCCCTAGGCTTAAACGTCAACCCAGCATCACTTCCTACTGATGCCAAGAGAAGAATCAA
TGAATTTAACAATGAAATTACAACGGTTATGGAAGACCTCGTGAACTCCACGGATTTGAA
AAACAAGATTGAGTTGTTAAAGATGGAGGTAACAAAGGCTGGAAAGACAGCAGATGCTGA
GTCAAAGGCAAAAATTCAGGCCTTAGAACAGCAAATAAAGCAAAGTCTTGCACAGGCTAT
GAGTTTTCCAGAGTTAAAGGAGAAACACGAGAAGCTGAAGGAAGAGATTGTGGAAACCAT
TGAATCCCTTCAAGGATCCAATGGAAGTTTGCTAGCAGATAACGGTGGTGCCAATTCAGG
AGTAGGAGTAAATGTAGATGCAAACCGTAGCTTTGCCTGATTTCAACCATGATGCAGGTT
AGCAACTAGCTTTTGCAAAAGATAAATCTGTGAAACTACTCCAGTATGCAGACAATGGAG
CCTTTTTCTTTGCGGTGCACTCAATTTGCAATTCCTTTCTCAGACTAGGCTCTGCTACAA
TTTTTCTGGATTTTGTTTTGTGTTTCTTTAGAATAATTAACAGTTGTTTTAAGAGTTTTA
AGTTAGATTGAAATGTTACTTTAATGAACATTGTTTAGCAGCGAAATACTGTATAAATTA
TGTGTCTGGAGAGAAGAAGGTTAGATCATGCTGCAAAATACCAACTGGTTGAGTTCTCAT
AAATGTTATCTGATATGCTATGGAGTATTTTCTTTTCTCAATTATTGAAACATATGAAGA
TAGT