Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g011320.3.1
CDS Infomation

Serine/threonine-protein kinase (AHRD V3.3 *** A0A0K0XR56_TOBAC)
Sequence

ATGGCTCAATCGATGAGCAGAGGAGGGAGGTCTGTAGTTGGGGACTATGTTGTTGGGAAG
CAAATCGGTGCCGGCTCTTTCTCGACGGTTTGGCATGCTCGGCACCGAGCTCATGGAACA
GAAGTGGCTATAAAAGAGATCGTTACGGCTCGGCTTAACAATAAGCTTCAGGAGAGTCTA
AAGTCGGAAATTGTAATTTTGCAGAAGATCAATCATCCTAATATTATTCGCCTGCACGAC
ATGATCGAGGAGGTGGGCAAAATATATATTGTTCTGGAGTACTGCAGAGGAGGAGATCTT
TCTATGTACATTCAACAAAGCCAAGGGAGAATTCCAGAAGCAACTGCGAAACATTTTATG
CAGCAACTTGCATCTGGTCTAAAAATCCTTCGTGACAACAATCTAATCCATAGGGATCTA
AAGCCTCAGAATCTCCTCTTATCCTCAAGCAATGACCGCTCCACCTTGAAGATTGCTGAT
TTTGGATTTGCTAGGTCTTTGCAACCTAGGGGTCTTGCTGAAACACTTTGTGGTTCACCA
TTGTACATGGCTCCAGAAATAATGCAACTTCAGAAGTATGATGCAAAGGCAGATCTCTGG
AGCGTCGGTGCCATCCTATTTCAGCTAGTAACTGGCAAAACCCCTTTTACCGGAAACAAT
CAAATCCAGTTGCTCCAGAACATATTGAAGTCGACTGAATTGCTGTTTCCTCCAAGTGCA
AAAAATTTAAGTCCTAGCTGCATAGATTTGTGTAAAAGATTGTTGCGCCGTTATCCAGTG
GAGCGGTTGACATTTGAAGAGTTCTTTAACCACCCATTTCTTGCACAGAAGCAGCCAGAT
GAGCTGTCTTGGGATACGAGACCTCAAAGGGTAATAGGTGGTTTTCCTATATCAGAAGGC
TATCCTGCGAGGGGCTCAGAGGAAACTTTTCAAGAAGATGGTTTACCCTTTAGTCTAGAT
GATTATTCCAGCGGTCCTTCATTTACTGGGAGATCACCACAGAGGTTGTCATATGGTTTT
TCTTGTGATGCAAAAGCTGAAAGGAAAGAAGTTACTAGTAGTACCCAACAGAAAACAGAT
GGTATTGGCTCTAGCCACCGACATTCAGAAGGAAACCTGAAGGAATCTATTAATTTGAAG
GACCACAGACAAACAACTACTCGTTCAAAAGTGGTGGATTCATTCGAGTTGATTGATCAG
GACTATGTTATTGTTTCCGGCCCTCCAGTGGATTCATATTCTTCAATAGGTGCTTCTAGG
CTTTGCAATATGCCTTTCAGATCAAGCTGTTCCCTGCAAGCGTCTGCGAGAGTAGATCCT
AGACCAAGTGACCCGGTGCCTATTAGTGGTCCTCCTCTTAGTAGAATAGGTCATTTAGGA
AGTTCGGAAAGTCCCTCATCTGCACCTGGAGCTTCACAAGTATGCACTGATGTCATAAAT
TGCTTGGAGCAGTCACCACCTGATGGCATGGCCAGAATAGAGTCCCTGCAGCGTTCTGCC
TCTGCTATCATGGAATTAGTAAATGAGAAGGTTGAAGCAGGCAGGCATCTGGAAGCATTT
TCAATTCAGCTAGTCATTCTTGCTATATGGAAGCAAGCTCTGGATATTTGTCATACTCAA
GCGGCATCGGCAATTGAAGGAAGTCCGAGCCAAGAGACAATCAGATTAAAGGAAATGATG
AAGAAAGGTCAAGTTAGTCTTAGCATAAAAGAGCGTCTTGATGCTAGTAACAGTTTGGGG
CCAGAGAATGTGTGTTCTCATATTGAAAAAACATTTCTTGGTGAAGTTGGTAATGCAGAG
GAACTTGCCAAACATATAGAGCCTGGAAATACAGAGGTTCCAGATGCAATGGAGATGATA
TTTCAATCTGCCCTGGCTTTGGGTAGAAAGGGAGCTGTTGATGAGTACATGAGTCGGACT
GAAAATGCAGTCATATTTTATTCAAAAGCTGTGCGGTTGTTAGCATTCCTTCAAGTGGAA
GCACCATCTCTGATTTTAAACCCTCCACTTTCTCTAACAAACTCGGATCGTTATAGGCTT
CAAAATTACATTGATGTCCTTAATAACAGGCAAAGCATTTCAAAGTCTCAAATGATGGCT
CTGCTCAAGTGTGAAGATCAACACTGCTCTCCATAA

Peptide Sequence

PEP ID

Solyc09g011320.3.1
PEP Infomation

Serine/threonine-protein kinase (AHRD V3.3 *** A0A0K0XR56_TOBAC)
Sequence

MAQSMSRGGRSVVGDYVVGKQIGAGSFSTVWHARHRAHGTEVAIKEIVTARLNNKLQESL
KSEIVILQKINHPNIIRLHDMIEEVGKIYIVLEYCRGGDLSMYIQQSQGRIPEATAKHFM
QQLASGLKILRDNNLIHRDLKPQNLLLSSSNDRSTLKIADFGFARSLQPRGLAETLCGSP
LYMAPEIMQLQKYDAKADLWSVGAILFQLVTGKTPFTGNNQIQLLQNILKSTELLFPPSA
KNLSPSCIDLCKRLLRRYPVERLTFEEFFNHPFLAQKQPDELSWDTRPQRVIGGFPISEG
YPARGSEETFQEDGLPFSLDDYSSGPSFTGRSPQRLSYGFSCDAKAERKEVTSSTQQKTD
GIGSSHRHSEGNLKESINLKDHRQTTTRSKVVDSFELIDQDYVIVSGPPVDSYSSIGASR
LCNMPFRSSCSLQASARVDPRPSDPVPISGPPLSRIGHLGSSESPSSAPGASQVCTDVIN
CLEQSPPDGMARIESLQRSASAIMELVNEKVEAGRHLEAFSIQLVILAIWKQALDICHTQ
AASAIEGSPSQETIRLKEMMKKGQVSLSIKERLDASNSLGPENVCSHIEKTFLGEVGNAE
ELAKHIEPGNTEVPDAMEMIFQSALALGRKGAVDEYMSRTENAVIFYSKAVRLLAFLQVE
APSLILNPPLSLTNSDRYRLQNYIDVLNNRQSISKSQMMALLKCEDQHCSP*

Transcript Sequence

Transcript ID

Solyc09g011320.3.1
Transcript Infomation

Serine/threonine-protein kinase (AHRD V3.3 *** A0A0K0XR56_TOBAC)
Sequence

ATAGAGCTATAATTATGTGGTATTTATAATAATAGATCACGTCATATTTAAGTTCGTTTT
TATATAGGCTTTAAGTCAATATGTTCTCTTATTTATAGGATGTTGCAAGAAAAAGTTCAA
AATAAATTTAAAATAATAAATAATTAATAACTAATATTTTTTAAAAATTACAATAAATAA
ATTAGAAACATAAAATTATAATTATATGATCTTCACACAAATAGACCACGTCGCATTTAG
TCCGTTCCCCTATATGGCTCAAGTCAATATGTTCACAAAGTGTACGACACAATGACCATA
ACTTCAAGCAAACCTTCCAACACTATCCTTCTCCCCCACACAATTATTAATTAAACCCCT
AAAAAATTAATTAAGCTTTATAATCAAGATAAACTCTATTAATTTCTATTCTTATTAACT
CAAATCATATATTTTTTCAATTTTCAAAGCTCGATCACCATCACCAGCTCAAATAAATCT
CCCTTAATCTCAACTTTTAATTGAATTTGACCGCTGTGGACCTTCTTCTCTGGTAAGGCC
GTGTTTGGTGGTGGACCTCTCCGATAAGGCCGTGTTTGGTGGTGGAAAATTCCGTTAGGG
TTTTTGTGGAGATGGCTCAATCGATGAGCAGAGGAGGGAGGTCTGTAGTTGGGGACTATG
TTGTTGGGAAGCAAATCGGTGCCGGCTCTTTCTCGACGGTTTGGCATGCTCGGCACCGAG
CTCATGGAACAGAAGTGGCTATAAAAGAGATCGTTACGGCTCGGCTTAACAATAAGCTTC
AGGAGAGTCTAAAGTCGGAAATTGTAATTTTGCAGAAGATCAATCATCCTAATATTATTC
GCCTGCACGACATGATCGAGGAGGTGGGCAAAATATATATTGTTCTGGAGTACTGCAGAG
GAGGAGATCTTTCTATGTACATTCAACAAAGCCAAGGGAGAATTCCAGAAGCAACTGCGA
AACATTTTATGCAGCAACTTGCATCTGGTCTAAAAATCCTTCGTGACAACAATCTAATCC
ATAGGGATCTAAAGCCTCAGAATCTCCTCTTATCCTCAAGCAATGACCGCTCCACCTTGA
AGATTGCTGATTTTGGATTTGCTAGGTCTTTGCAACCTAGGGGTCTTGCTGAAACACTTT
GTGGTTCACCATTGTACATGGCTCCAGAAATAATGCAACTTCAGAAGTATGATGCAAAGG
CAGATCTCTGGAGCGTCGGTGCCATCCTATTTCAGCTAGTAACTGGCAAAACCCCTTTTA
CCGGAAACAATCAAATCCAGTTGCTCCAGAACATATTGAAGTCGACTGAATTGCTGTTTC
CTCCAAGTGCAAAAAATTTAAGTCCTAGCTGCATAGATTTGTGTAAAAGATTGTTGCGCC
GTTATCCAGTGGAGCGGTTGACATTTGAAGAGTTCTTTAACCACCCATTTCTTGCACAGA
AGCAGCCAGATGAGCTGTCTTGGGATACGAGACCTCAAAGGGTAATAGGTGGTTTTCCTA
TATCAGAAGGCTATCCTGCGAGGGGCTCAGAGGAAACTTTTCAAGAAGATGGTTTACCCT
TTAGTCTAGATGATTATTCCAGCGGTCCTTCATTTACTGGGAGATCACCACAGAGGTTGT
CATATGGTTTTTCTTGTGATGCAAAAGCTGAAAGGAAAGAAGTTACTAGTAGTACCCAAC
AGAAAACAGATGGTATTGGCTCTAGCCACCGACATTCAGAAGGAAACCTGAAGGAATCTA
TTAATTTGAAGGACCACAGACAAACAACTACTCGTTCAAAAGTGGTGGATTCATTCGAGT
TGATTGATCAGGACTATGTTATTGTTTCCGGCCCTCCAGTGGATTCATATTCTTCAATAG
GTGCTTCTAGGCTTTGCAATATGCCTTTCAGATCAAGCTGTTCCCTGCAAGCGTCTGCGA
GAGTAGATCCTAGACCAAGTGACCCGGTGCCTATTAGTGGTCCTCCTCTTAGTAGAATAG
GTCATTTAGGAAGTTCGGAAAGTCCCTCATCTGCACCTGGAGCTTCACAAGTATGCACTG
ATGTCATAAATTGCTTGGAGCAGTCACCACCTGATGGCATGGCCAGAATAGAGTCCCTGC
AGCGTTCTGCCTCTGCTATCATGGAATTAGTAAATGAGAAGGTTGAAGCAGGCAGGCATC
TGGAAGCATTTTCAATTCAGCTAGTCATTCTTGCTATATGGAAGCAAGCTCTGGATATTT
GTCATACTCAAGCGGCATCGGCAATTGAAGGAAGTCCGAGCCAAGAGACAATCAGATTAA
AGGAAATGATGAAGAAAGGTCAAGTTAGTCTTAGCATAAAAGAGCGTCTTGATGCTAGTA
ACAGTTTGGGGCCAGAGAATGTGTGTTCTCATATTGAAAAAACATTTCTTGGTGAAGTTG
GTAATGCAGAGGAACTTGCCAAACATATAGAGCCTGGAAATACAGAGGTTCCAGATGCAA
TGGAGATGATATTTCAATCTGCCCTGGCTTTGGGTAGAAAGGGAGCTGTTGATGAGTACA
TGAGTCGGACTGAAAATGCAGTCATATTTTATTCAAAAGCTGTGCGGTTGTTAGCATTCC
TTCAAGTGGAAGCACCATCTCTGATTTTAAACCCTCCACTTTCTCTAACAAACTCGGATC
GTTATAGGCTTCAAAATTACATTGATGTCCTTAATAACAGGCAAAGCATTTCAAAGTCTC
AAATGATGGCTCTGCTCAAGTGTGAAGATCAACACTGCTCTCCATAAGGAGGAGAGAGAG
CTGTTAACACAAAGTGATGATAGCATACATCAGTGTCTTACTCTGTAAAATTCTTTTGTC
TGTACAGTTATTCTTTTAGCAATATTTTAAAGTGAAAAGGAAAGAAAAAAAGAAAAATGG
CAAGTCATTTTCGTTAACGCTTGTAACATTGTGTTTCTCTTTCTTTAATTAAATTTTAAT
TCACCTGGACAATCTCCTTATATTCATCTGGAGACGGCCTCTTTCAGCACATTGAGCTCT
TTGTTAGCTAATATCTATCTTTTCTAAAGACTAGTGGTATGCATCCCGTTAAAAATTTAA
CTTCAGATGTCTATATCTTTACAATA