Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g010920.1.1
CDS Infomation	GRAS family transcription factor (AHRD V3.3 *** A0A072U0I2_MEDTR)
Sequence	ATGGATCCGAGGTTTAATGGACATCGGAGTTCTTTGAATAATTTTCGATTTGGGAACCAA CCATTACCTTTTTCTTCAGAGCAGAGGATGATTAATGTACCAAGATTTGGACTCATTTAT TCAGATCAGAATCTTCTCAATGGTCCTAGACTTGAAAATAACTTTGTCCAACACGATTTT GGTGCTGTTGGATTTATAAGTGGTGATCATTTACCTACTAGTGTAGAATCAAGAACTGAC CTTGGTGTTGAGAACGACTTCAATGAAGATATTGATTTCTCGGATGCAGTGTTGAGCTAT ATAAATCGGATGCTAATGGAAGAAGACATGGAGGACAAGACAGATATGCTTCAGGAGTCC TTGGAACTTCAAGCTAAAGAGAAGTCACTTTATGAGGCCCTCGGTAAGAAGTATCCACCA TCACTGGAGCAAAACGTGTTTACTGTTCGGAACAGTGAGAGTCCTGATGACTACGTTGCA GGAAGTATATACAATTCCACAAGTAATACTGGTGACAGTAGTGGTTACCTAGTCGATCCA AGGGGGGTTAACATTTCTACCGACTGCAATTCTTCTTACTTCGAAGGCCTTTCATTTCAT AATACTTCTTCACTATGCTCATCAAATAGTGGGAGTAATGTTGTCGATGGATTCTTAGAT TCTCCTGTTAGTTCTTTTCGTATTCCTGATATATACGATGAGAGTCGATCTATTTTGAAC TTTCAGAAAGGAGTTGAAGAAGCAAGTAAGTTCCTCCCGACTAGTAATAAGTTGTTGAAC AGTATAGATATAAATGGCTTGCCATCTCGGGAGCCCCATAGGCAAACTGCTTATGCAGCT GCTCAGGTGGAGGAAAAGGATGAGGGAGAGACTTCACCAACTGAGGGGAGAGGGAAGAAA AATCCTCTGAGGGGTGATAATAATATCGAAGAAGAAAGAAGTAGCAAACAGGCTGCAGTT TTTACTGAATCAACTCTACGATCCGAGGAGTTTGATATCGTCTTGCTGAATAGCATGGGG AAGGGAGGAGAAGCATTAGAAGCTTATCAACAAAACCTGAGGAATGCTAAAAGCAAAACT ACAGTGCAGATATCAAAAAAATCAAAAGGAGGAAAGGGCCGGGGGAAGAAACAGGGTGGA AAGAAGGAAGTCATAGATTTGAGAACTCTCATGATAAATTGTGCGCAAGCTGTTGCTGCT GACGATTCCAGGATTGCGAATGAACTTTTGAAACAAATCAGACAACATTCATCCCCATTT GGAGATGGAAACCAGAGATTAGCTCATTGCTTTGCAGATGGCCTCGAGGCGCGTTTGGCT GGTACTGGTAGCCAGATATATAAAGCTCTTGTCAATAAACGAACATCTGCAGCTGATCTT TTGAAGGCCTACCATTTGTATCTTGCATCTAGCCCATTCAGAAAGATCTCAAGTTTTGCT TCAAACAAGACAATCATGCTAAAGGCAGAGAATGCAACAAGGGTTCATGTTATTGACTTT GGCATCCTGTATGGCTTCCAATGGCCTACATTCATCCAACGTATTGCAGAAAGAGAAGGG GGGCCACCAAGGCTTCGTATTACTGGCATAGAGTTTCCGCAACCAGGCTTCAGGCCAGCG GAACGGATTGAAGAAACAGGTCGCCGTTTAGCTGATTATGCTCGATCCTTTAATGTTCCA TTTGAATACCATGCAATTGCAAAGAAATGGGAGAGCATTACAGTTGAGGATCTAAAACTC GACAAAGATGAATTTCTTGCTGTCAACTGCTTGTATCGTTTTAAGAACCTGCATGATGAG ACTATTGCAGTTGAAAGTTCAAGAACTATCGTACTCAACCTCGTAAGGAAGATCAATCCA GATATCTTCGTGCATGGTATTGTCAATGGGGCTTATAGTGCCCCATTTTTCGTCACACGG TTTCGTGAGGCCTTGTTCCACTTTTCTGCACTTTTTGATATTCTTGAAACTATTGTTCCC CGTGAGATTCCAGAAAGACGATTAATTGAGAGAGAGATATTTGGGAGGGAAGCCCTGAAT GTCATAGCTTGTGAGGGGTGGGAAAGAGTTGAACGTCCAGAGACCTACAAGCAGTGGCAA GCTCGTATTATGGGGGCAAGGTTTACACAGATACCTTTTGACCGGGAGGAATTTGTGAAT AAGGCAATAGAAAAAGTGAGGTTAGGATATCATAGAGACTTTGTAATAGATGAAGATAGC CAGTGGTTGTTGCTGGGGTGGAAAGGAAGAACAATTTACGCCTTATCTTGTTGGAAACCT GTGTAA

Peptide Sequence

PEP ID	Solyc09g010920.1.1
PEP Infomation	GRAS family transcription factor (AHRD V3.3 *** A0A072U0I2_MEDTR)
Sequence	MDPRFNGHRSSLNNFRFGNQPLPFSSEQRMINVPRFGLIYSDQNLLNGPRLENNFVQHDF GAVGFISGDHLPTSVESRTDLGVENDFNEDIDFSDAVLSYINRMLMEEDMEDKTDMLQES LELQAKEKSLYEALGKKYPPSLEQNVFTVRNSESPDDYVAGSIYNSTSNTGDSSGYLVDP RGVNISTDCNSSYFEGLSFHNTSSLCSSNSGSNVVDGFLDSPVSSFRIPDIYDESRSILN FQKGVEEASKFLPTSNKLLNSIDINGLPSREPHRQTAYAAAQVEEKDEGETSPTEGRGKK NPLRGDNNIEEERSSKQAAVFTESTLRSEEFDIVLLNSMGKGGEALEAYQQNLRNAKSKT TVQISKKSKGGKGRGKKQGGKKEVIDLRTLMINCAQAVAADDSRIANELLKQIRQHSSPF GDGNQRLAHCFADGLEARLAGTGSQIYKALVNKRTSAADLLKAYHLYLASSPFRKISSFA SNKTIMLKAENATRVHVIDFGILYGFQWPTFIQRIAEREGGPPRLRITGIEFPQPGFRPA ERIEETGRRLADYARSFNVPFEYHAIAKKWESITVEDLKLDKDEFLAVNCLYRFKNLHDE TIAVESSRTIVLNLVRKINPDIFVHGIVNGAYSAPFFVTRFREALFHFSALFDILETIVP REIPERRLIEREIFGREALNVIACEGWERVERPETYKQWQARIMGARFTQIPFDREEFVN KAIEKVRLGYHRDFVIDEDSQWLLLGWKGRTIYALSCWKPV*

Transcript Sequence

Transcript ID	Solyc09g010920.1.1
Transcript Infomation	GRAS family transcription factor (AHRD V3.3 *** A0A072U0I2_MEDTR)
Sequence	ATGGATCCGAGGTTTAATGGACATCGGAGTTCTTTGAATAATTTTCGATTTGGGAACCAA CCATTACCTTTTTCTTCAGAGCAGAGGATGATTAATGTACCAAGATTTGGACTCATTTAT TCAGATCAGAATCTTCTCAATGGTCCTAGACTTGAAAATAACTTTGTCCAACACGATTTT GGTGCTGTTGGATTTATAAGTGGTGATCATTTACCTACTAGTGTAGAATCAAGAACTGAC CTTGGTGTTGAGAACGACTTCAATGAAGATATTGATTTCTCGGATGCAGTGTTGAGCTAT ATAAATCGGATGCTAATGGAAGAAGACATGGAGGACAAGACAGATATGCTTCAGGAGTCC TTGGAACTTCAAGCTAAAGAGAAGTCACTTTATGAGGCCCTCGGTAAGAAGTATCCACCA TCACTGGAGCAAAACGTGTTTACTGTTCGGAACAGTGAGAGTCCTGATGACTACGTTGCA GGAAGTATATACAATTCCACAAGTAATACTGGTGACAGTAGTGGTTACCTAGTCGATCCA AGGGGGGTTAACATTTCTACCGACTGCAATTCTTCTTACTTCGAAGGCCTTTCATTTCAT AATACTTCTTCACTATGCTCATCAAATAGTGGGAGTAATGTTGTCGATGGATTCTTAGAT TCTCCTGTTAGTTCTTTTCGTATTCCTGATATATACGATGAGAGTCGATCTATTTTGAAC TTTCAGAAAGGAGTTGAAGAAGCAAGTAAGTTCCTCCCGACTAGTAATAAGTTGTTGAAC AGTATAGATATAAATGGCTTGCCATCTCGGGAGCCCCATAGGCAAACTGCTTATGCAGCT GCTCAGGTGGAGGAAAAGGATGAGGGAGAGACTTCACCAACTGAGGGGAGAGGGAAGAAA AATCCTCTGAGGGGTGATAATAATATCGAAGAAGAAAGAAGTAGCAAACAGGCTGCAGTT TTTACTGAATCAACTCTACGATCCGAGGAGTTTGATATCGTCTTGCTGAATAGCATGGGG AAGGGAGGAGAAGCATTAGAAGCTTATCAACAAAACCTGAGGAATGCTAAAAGCAAAACT ACAGTGCAGATATCAAAAAAATCAAAAGGAGGAAAGGGCCGGGGGAAGAAACAGGGTGGA AAGAAGGAAGTCATAGATTTGAGAACTCTCATGATAAATTGTGCGCAAGCTGTTGCTGCT GACGATTCCAGGATTGCGAATGAACTTTTGAAACAAATCAGACAACATTCATCCCCATTT GGAGATGGAAACCAGAGATTAGCTCATTGCTTTGCAGATGGCCTCGAGGCGCGTTTGGCT GGTACTGGTAGCCAGATATATAAAGCTCTTGTCAATAAACGAACATCTGCAGCTGATCTT TTGAAGGCCTACCATTTGTATCTTGCATCTAGCCCATTCAGAAAGATCTCAAGTTTTGCT TCAAACAAGACAATCATGCTAAAGGCAGAGAATGCAACAAGGGTTCATGTTATTGACTTT GGCATCCTGTATGGCTTCCAATGGCCTACATTCATCCAACGTATTGCAGAAAGAGAAGGG GGGCCACCAAGGCTTCGTATTACTGGCATAGAGTTTCCGCAACCAGGCTTCAGGCCAGCG GAACGGATTGAAGAAACAGGTCGCCGTTTAGCTGATTATGCTCGATCCTTTAATGTTCCA TTTGAATACCATGCAATTGCAAAGAAATGGGAGAGCATTACAGTTGAGGATCTAAAACTC GACAAAGATGAATTTCTTGCTGTCAACTGCTTGTATCGTTTTAAGAACCTGCATGATGAG ACTATTGCAGTTGAAAGTTCAAGAACTATCGTACTCAACCTCGTAAGGAAGATCAATCCA GATATCTTCGTGCATGGTATTGTCAATGGGGCTTATAGTGCCCCATTTTTCGTCACACGG TTTCGTGAGGCCTTGTTCCACTTTTCTGCACTTTTTGATATTCTTGAAACTATTGTTCCC CGTGAGATTCCAGAAAGACGATTAATTGAGAGAGAGATATTTGGGAGGGAAGCCCTGAAT GTCATAGCTTGTGAGGGGTGGGAAAGAGTTGAACGTCCAGAGACCTACAAGCAGTGGCAA GCTCGTATTATGGGGGCAAGGTTTACACAGATACCTTTTGACCGGGAGGAATTTGTGAAT AAGGCAATAGAAAAAGTGAGGTTAGGATATCATAGAGACTTTGTAATAGATGAAGATAGC CAGTGGTTGTTGCTGGGGTGGAAAGGAAGAACAATTTACGCCTTATCTTGTTGGAAACCT GTGTAA