Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g010450.1.1
CDS Infomation	Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT3G53700.1)
Sequence	ATGGCTTTCTCTTTCTCTTCTTTCCTCAAATGTCATCCATGGATTCAATCTCAAAATCCA CCAAACCCCTTTTCATTTCCTCCTCCATTTCATCCTCCTAAACCCATATCTCTCCCATTT TCATCTCGCCATGAACATGTTTCTTCAACTGTTTTACCTTCTAAAGCAAAAGAACTCTTG CAAGATTTCACACCTAAGCAATTTCTCGACACCCTTCGTCAAGAAAATGATGAAACTTCA GCTTTTCATCTCTTTGAATGGGCTTCTAAGCAACCCCATTTCACAACCACTTTGTCTATA TACGAGGAGATTCTAAGGAAGCTTGGAAATGTGGGATTTTTTGATTTAATGAAGGGGGTA TTGGATGATATGAAGAGATTGAAGGTTGAATTAGTTGAAGGTACTTTCTTTATCTTTATT GAAAGTTATGCTAAATTTGAGTTGTATAATGAAGCTATTAAGGTTCTTGATATGATGTGG AATGAGTTTGGTGTAAAGCCTGGTACTTTTAGTTATAATTTGTTGTTGAATGTTCTTGTT GATGGGAATAAGTTGAAATTTGTTGAAAATGTGCATAGTAGAATGTTGGATGAAGGTGTA AAGGCGGATGTATCGACTTTTAATATATTGATAAAAGCTTTGTGTAAGACGCATCAGATT AGGCCTGCTATTTTGATGATGGAGGAAATGCCTATGCACGGTTTGGTACCGGATGAAAGG ACTTTTACGACGATAATGCAAGGTTATATTGAGGAAGGGAATTTAGATGGTGCATTGAGA ATTAGGGATCAAATGGTGTCAGCTAAATGTCTTGCAAGTAATATTACTGTTAATCTTTTG ATTCATGGGTACTGTAAAGAAGGAAGGATTGATGAAGCTCTGAACTTTGTGCAAGATATG TGTAGTCGAGGGTTTTCTCCGGACCAATTTACATTCAACACTTTGATAAACGGTTTGTGC AAAGCAGGACACGCTGTCCAAGCCTTGGATATTTTGGATTTAATGTTGCAGGACGCGTTT GATCCTGATGTATATACTTATAATATTTTGATTTCTGGGCTTTGTGAAGTTGGTGAAGTC CAAGAGGCTATGGAACTTCTCAATCAGATGCTTGTAAGGGACTGTACACCAAATACAGTC ACTTATAACACCATCATTAGTGCTTTGTGTAAGGTGAACCAAGTCCAAGAAGCTACCGAG TTTGCTCGCGTTCTTACGAGCAAAGGGTTCTTACCTGATGTTTGCACTTTCAATTCTCTC ATACAAGGTCTCTGCTTTACCGGCAATTTCAATATTGCAATGGAAATGTTTGAAGAAATG AAGGACAAAGGTTGCCAGCCAGACGAATTCACCTATAATATCCTAATTGATTGTCTCTGT GCCAAAAGGAGAATAGGTGAAGCTTTGAACCTACTCAAAGATATGGAATCGAGTGGCTGT GCAAGAAGTGTGATAACATACAATACTCTGATAGATGGCTTCTGCAAAGACAAGAAAATT GAAGAAGCAGAAGAGATTTTCGACCAGATGGAACTACAAGGGGTTTCTAGAAACCTGGTC ACATATAACACTCTGATTGATGGTCTTTGTAAGAGTAAGAGAGTAGAAGATGCTGCTCAG CTTATGGATCAGATGATACTGGAAGGACTAAAGCCTGACAAATTCACGTACAATTCCATT CTTGCTCATTTCTGCAGAGCAGGGGATATAAAAAAGGCTGCAGACATTGTGCAAACCATG ACATCAAATGGCTGTGAACCAGACATTGTTACGTATGGGACCTTAATACAGGGACTATGT AAAGCAGGTAGGGTTGAGATTGCAAGCAAGCTCCTCAGGAGTATTCAAATGAAAGGAATG ATTTTGACCCCTCAAGCCTATAATCCTGTAATTCAAGCAATCTTCAGACGGAGGAAAACC AATGAAGCCGTAAGACTCTTCAGAGAAATGCAGGAAACAGCTAGTCCTCCTGATGCTTTA TCTTATAAGATTGTTTTTCGTGGTCTTTCTTCTGGTGGGGGACCGATTCAAGAAGCTGTT GATTTTTCTGTTGAGATGATGGAAAAAGGACACATACCTGAATTTTCCTCATTCTACAAT CTGGCTGAAGGACTGTATTCTTTGTCGAGGGAGGACACGCTAGTTAAGCTTGTTGGCATG ATCATGAAGAAAGCAAACTTCTCAGACAGTGAGGTTACTATGATTAAAGGTTTCTTGAAA ATCCGGAAATTCCAAGATGCACTGGCTACTCTTGGCAGTGTCCTAGATAGCAGATACCCA AAAAGGACATACTGGAGCTAA

Peptide Sequence

PEP ID	Solyc09g010450.1.1
PEP Infomation	Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT3G53700.1)
Sequence	MAFSFSSFLKCHPWIQSQNPPNPFSFPPPFHPPKPISLPFSSRHEHVSSTVLPSKAKELL QDFTPKQFLDTLRQENDETSAFHLFEWASKQPHFTTTLSIYEEILRKLGNVGFFDLMKGV LDDMKRLKVELVEGTFFIFIESYAKFELYNEAIKVLDMMWNEFGVKPGTFSYNLLLNVLV DGNKLKFVENVHSRMLDEGVKADVSTFNILIKALCKTHQIRPAILMMEEMPMHGLVPDER TFTTIMQGYIEEGNLDGALRIRDQMVSAKCLASNITVNLLIHGYCKEGRIDEALNFVQDM CSRGFSPDQFTFNTLINGLCKAGHAVQALDILDLMLQDAFDPDVYTYNILISGLCEVGEV QEAMELLNQMLVRDCTPNTVTYNTIISALCKVNQVQEATEFARVLTSKGFLPDVCTFNSL IQGLCFTGNFNIAMEMFEEMKDKGCQPDEFTYNILIDCLCAKRRIGEALNLLKDMESSGC ARSVITYNTLIDGFCKDKKIEEAEEIFDQMELQGVSRNLVTYNTLIDGLCKSKRVEDAAQ LMDQMILEGLKPDKFTYNSILAHFCRAGDIKKAADIVQTMTSNGCEPDIVTYGTLIQGLC KAGRVEIASKLLRSIQMKGMILTPQAYNPVIQAIFRRRKTNEAVRLFREMQETASPPDAL SYKIVFRGLSSGGGPIQEAVDFSVEMMEKGHIPEFSSFYNLAEGLYSLSREDTLVKLVGM IMKKANFSDSEVTMIKGFLKIRKFQDALATLGSVLDSRYPKRTYWS*

Transcript Sequence

Transcript ID	Solyc09g010450.1.1
Transcript Infomation	Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT3G53700.1)
Sequence	ATGGCTTTCTCTTTCTCTTCTTTCCTCAAATGTCATCCATGGATTCAATCTCAAAATCCA CCAAACCCCTTTTCATTTCCTCCTCCATTTCATCCTCCTAAACCCATATCTCTCCCATTT TCATCTCGCCATGAACATGTTTCTTCAACTGTTTTACCTTCTAAAGCAAAAGAACTCTTG CAAGATTTCACACCTAAGCAATTTCTCGACACCCTTCGTCAAGAAAATGATGAAACTTCA GCTTTTCATCTCTTTGAATGGGCTTCTAAGCAACCCCATTTCACAACCACTTTGTCTATA TACGAGGAGATTCTAAGGAAGCTTGGAAATGTGGGATTTTTTGATTTAATGAAGGGGGTA TTGGATGATATGAAGAGATTGAAGGTTGAATTAGTTGAAGGTACTTTCTTTATCTTTATT GAAAGTTATGCTAAATTTGAGTTGTATAATGAAGCTATTAAGGTTCTTGATATGATGTGG AATGAGTTTGGTGTAAAGCCTGGTACTTTTAGTTATAATTTGTTGTTGAATGTTCTTGTT GATGGGAATAAGTTGAAATTTGTTGAAAATGTGCATAGTAGAATGTTGGATGAAGGTGTA AAGGCGGATGTATCGACTTTTAATATATTGATAAAAGCTTTGTGTAAGACGCATCAGATT AGGCCTGCTATTTTGATGATGGAGGAAATGCCTATGCACGGTTTGGTACCGGATGAAAGG ACTTTTACGACGATAATGCAAGGTTATATTGAGGAAGGGAATTTAGATGGTGCATTGAGA ATTAGGGATCAAATGGTGTCAGCTAAATGTCTTGCAAGTAATATTACTGTTAATCTTTTG ATTCATGGGTACTGTAAAGAAGGAAGGATTGATGAAGCTCTGAACTTTGTGCAAGATATG TGTAGTCGAGGGTTTTCTCCGGACCAATTTACATTCAACACTTTGATAAACGGTTTGTGC AAAGCAGGACACGCTGTCCAAGCCTTGGATATTTTGGATTTAATGTTGCAGGACGCGTTT GATCCTGATGTATATACTTATAATATTTTGATTTCTGGGCTTTGTGAAGTTGGTGAAGTC CAAGAGGCTATGGAACTTCTCAATCAGATGCTTGTAAGGGACTGTACACCAAATACAGTC ACTTATAACACCATCATTAGTGCTTTGTGTAAGGTGAACCAAGTCCAAGAAGCTACCGAG TTTGCTCGCGTTCTTACGAGCAAAGGGTTCTTACCTGATGTTTGCACTTTCAATTCTCTC ATACAAGGTCTCTGCTTTACCGGCAATTTCAATATTGCAATGGAAATGTTTGAAGAAATG AAGGACAAAGGTTGCCAGCCAGACGAATTCACCTATAATATCCTAATTGATTGTCTCTGT GCCAAAAGGAGAATAGGTGAAGCTTTGAACCTACTCAAAGATATGGAATCGAGTGGCTGT GCAAGAAGTGTGATAACATACAATACTCTGATAGATGGCTTCTGCAAAGACAAGAAAATT GAAGAAGCAGAAGAGATTTTCGACCAGATGGAACTACAAGGGGTTTCTAGAAACCTGGTC ACATATAACACTCTGATTGATGGTCTTTGTAAGAGTAAGAGAGTAGAAGATGCTGCTCAG CTTATGGATCAGATGATACTGGAAGGACTAAAGCCTGACAAATTCACGTACAATTCCATT CTTGCTCATTTCTGCAGAGCAGGGGATATAAAAAAGGCTGCAGACATTGTGCAAACCATG ACATCAAATGGCTGTGAACCAGACATTGTTACGTATGGGACCTTAATACAGGGACTATGT AAAGCAGGTAGGGTTGAGATTGCAAGCAAGCTCCTCAGGAGTATTCAAATGAAAGGAATG ATTTTGACCCCTCAAGCCTATAATCCTGTAATTCAAGCAATCTTCAGACGGAGGAAAACC AATGAAGCCGTAAGACTCTTCAGAGAAATGCAGGAAACAGCTAGTCCTCCTGATGCTTTA TCTTATAAGATTGTTTTTCGTGGTCTTTCTTCTGGTGGGGGACCGATTCAAGAAGCTGTT GATTTTTCTGTTGAGATGATGGAAAAAGGACACATACCTGAATTTTCCTCATTCTACAAT CTGGCTGAAGGACTGTATTCTTTGTCGAGGGAGGACACGCTAGTTAAGCTTGTTGGCATG ATCATGAAGAAAGCAAACTTCTCAGACAGTGAGGTTACTATGATTAAAGGTTTCTTGAAA ATCCGGAAATTCCAAGATGCACTGGCTACTCTTGGCAGTGTCCTAGATAGCAGATACCCA AAAAGGACATACTGGAGCTAA