Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g010280.3.1
CDS Infomation	LETM1-like protein (AHRD V3.3 *** AT3G11560.4)
Sequence	ATGTCGTTGAAGCTCCACCATCAGAATCTTCCTTCATCTAGTTCTTCTATTTCACGTCCT TCAGTTAAAGCAGTGAGAAACTATTATTTCAGCAGAAAAGTAGTAGGTTTGGATCACCTG ATATACAATCAATGCAATACAAGGAGGAGATGCCACACAAAACTTTATTTGTTACAGGGT GGAAATCGTGATCTTAATCCTCGAACATCGAGGATATTACACCTTTTGCCTTTTGCTTCT GCTGAGGATGGGGTGTCGGTCAATGGTAGTTCCAGACCAACTACAAGCAGTGATATGGAG GAAATGAGACTAAAACTAGATATATCTCTGCAAGGTGAAGATAATGGTTCTGGACTTGTC CAATCGCTGCATGATGCTGCAAGAGTAATTGAGCTAGGACTTAGACAACAAGGCTCATTA TCCAGGGTATCCTGGTTTTCAACTGCCTGGTTGGGCGGTGATAGAACTATTTGGATCAAG GAGCTATCTTATCAGGCATCTGTATACTCTCTACTTCAAGCAGCAATTGAGATTTTATCT CGAGGAGATGAAAGAGATAATGATATCAACATTTTCACGCAGAGGAGTTTATCAAGGCAA TCTGCTCCTTTGGAGAGCTTGATTAGAGATAGTTTATTAGCCAAGCAACCTGAAGCTTAT GATTGGTTTTGGTCTGAGCAAATTCCAGTAGTGGTTACCACCTTTGTGAATTACTTTGAG AAGGATCTGCGATTTGCTGCTGCTACTGCAGAGACCAGAAAGCAAACATCTCTATCTCCT CGAAATGCAAGTGATGTATCACTCCTTATGCTTGCACTCAGTTGCATTGCAGCGATTATG AAACTTGGTGCTGCAAAACTGTCGTGTACACAATTTTCGTCTCTTGTTCCAGACACACTT GGAAGATTGATGGACATGCTTGTCGAATTTATTCCTCTCCGACAGGCTTATCATTCCGTG AAGCCTATTGGTCTGCGTAGAGAATTTCTTGTCCATTTTGGTCCCAGAGCTGCAGCATGT AGAGTACAAAATGAATCAGGAACTGAAGAGGTTATATTCTGGGTGAGTCTTGTCCAAAAG CAGCTTCAACGAGCTATAGATCGAGAGAGAATATGGTCCAGACTCACCACAAGTGAGAGT ATCGAGGTTCTGGAAAAGGATCTGGCCATATTTGGTTTCTTTATTGCTTTGGGAAGAAGC ACAAAGGCTTTTCTTTCTGAAAATGGATTTGATACTCTTGACGAGCCAATTGAAGAATTA ATTAGGTATCTAATTGGGGGCAGTGTACTGTATTATCCTCAACTTGCATCAATAAGTTCT TATCAACTGTACGTGGAGGTTGTGTGTGAAGAGCTAGACTGGCTTCCTTTTTATCCAGGC ATTACTGCTAATTTTATCCGTAATACTGGGCACAAAAGTAAACAAGAAGTTCCTCCAAAT TTAGAAGCCATTCCACTAGTATTAGACGTGTGCTCTTACTGGATCCAGAGTTTCATTAAA TATAGTAAATGGCTGGAGAACCCTTCTCATGTCAAGGCAGCAAGATTCCTTTCAACTGGG CACAACAAGCTTAAGAAGTGCAGAGAGGATCTCGGAATTGAGAAGACTCGCGTGGGAGCT TATTCACAGATCAAGAAAGAAACAGATTCCTTTGATAAGGCACTGGAGAGTGTCGAAGAG GCTTTGGTAAGGCTAGAGGTATTGCTTCAAGAACTGCATATGTCAAGTGCTAGTTCACAG AAGGAGCACTTGAAAGCTGCATGTTCTGACCTTGAAAGGATTCGTAGAATTAAAAAAGAG GCTGAATTTCTTGAGGTTTCATTTAGAACGAAGGCAGCTTTCCTACAGCAGGAGGAAGAT GCTACTATGTCTACATCATCAAGTGGGGACAAGCAACAGTTCTCTAAACGCAAGGACAAC AAGGATGGTCAAAATAGGAGTGGGAATAACAGGATACAGGGATTATGGAGCTTCGTTGGT CGTCGGCCTAGCAAATCAGCAGACCAGGCATCATCGACTCCTAATGAGATTAGTGATGAT GGCTCTAAAGAACTTTCAGAGAGTACAGGCGTTATGGATTCAAAGTCAACTGAAGTTCGA AGGTTTGAACTATTAAGGAGTGAGCTAATGGAACTGGAGAAGCGGGTTCAAAGAAGTGCT GATCAATATGAGTATGAGGAGGAGGAAAGTCAGAAGGTGGATCGCACTTCCACGCATCCT GCAGGAGCTGAAAGAACTCAATTGGTTCTTCAGAAGAAAAAGGAGAGTGTTATTGAGAAA TCCTTAGACAAACTGAAAGAAACTAGCACGGATGTTTGGCAAGGAACTCAGCTTCTCGCT ATCGATGTTGCTGCAGCTTTAGGGCTACTTCGGAGGTCCATAGTAGGGGATGAGTTGACA GAAAAAGAGAAACAAGCATTGCGGAGAACTTTAACTGACTTGGCATCAGTTGTACCTATT GGATTTCTTATGCTTCTCCCTGTTACAGCAGTTGGGCATGCTGCTATGTTGGCTGGAATT CGAAGATATATGCCATCTCTGATACCTTCTACATATGGACCAGACAGATTAGCCCTCCTA AGGCAGCTTGAGAAAGTCAAGGAAATGGGAACTGAGGTGAATCCAACTGAAAAGGCTGAT GAATAG

Peptide Sequence

PEP ID	Solyc09g010280.3.1
PEP Infomation	LETM1-like protein (AHRD V3.3 *** AT3G11560.4)
Sequence	MSLKLHHQNLPSSSSSISRPSVKAVRNYYFSRKVVGLDHLIYNQCNTRRRCHTKLYLLQG GNRDLNPRTSRILHLLPFASAEDGVSVNGSSRPTTSSDMEEMRLKLDISLQGEDNGSGLV QSLHDAARVIELGLRQQGSLSRVSWFSTAWLGGDRTIWIKELSYQASVYSLLQAAIEILS RGDERDNDINIFTQRSLSRQSAPLESLIRDSLLAKQPEAYDWFWSEQIPVVVTTFVNYFE KDLRFAAATAETRKQTSLSPRNASDVSLLMLALSCIAAIMKLGAAKLSCTQFSSLVPDTL GRLMDMLVEFIPLRQAYHSVKPIGLRREFLVHFGPRAAACRVQNESGTEEVIFWVSLVQK QLQRAIDRERIWSRLTTSESIEVLEKDLAIFGFFIALGRSTKAFLSENGFDTLDEPIEEL IRYLIGGSVLYYPQLASISSYQLYVEVVCEELDWLPFYPGITANFIRNTGHKSKQEVPPN LEAIPLVLDVCSYWIQSFIKYSKWLENPSHVKAARFLSTGHNKLKKCREDLGIEKTRVGA YSQIKKETDSFDKALESVEEALVRLEVLLQELHMSSASSQKEHLKAACSDLERIRRIKKE AEFLEVSFRTKAAFLQQEEDATMSTSSSGDKQQFSKRKDNKDGQNRSGNNRIQGLWSFVG RRPSKSADQASSTPNEISDDGSKELSESTGVMDSKSTEVRRFELLRSELMELEKRVQRSA DQYEYEEEESQKVDRTSTHPAGAERTQLVLQKKKESVIEKSLDKLKETSTDVWQGTQLLA IDVAAALGLLRRSIVGDELTEKEKQALRRTLTDLASVVPIGFLMLLPVTAVGHAAMLAGI RRYMPSLIPSTYGPDRLALLRQLEKVKEMGTEVNPTEKADE*

Transcript Sequence

Transcript ID	Solyc09g010280.3.1
Transcript Infomation	LETM1-like protein (AHRD V3.3 *** AT3G11560.4)
Sequence	ATACGAAACAAAGAGATGAGTACCCAAAAGAACACTATAATAAAATGTGAAGTTATGGAG ACATATGAATTATGTGATGAATTTTCTCCCCACGTCTACGGATAAACCCTTTCTGTCACG TCTATTTACAAAAAAAAACTTGAAGCTTCCATTTCTCATTTCTCTGATAAAAAGTTAATC CCTTCTCGAACACTCAAAATCATCTTTTGAAGCTGATGTCGTTGAAGCTCCACCATCAGA ATCTTCCTTCATCTAGTTCTTCTATTTCACGTCCTTCAGTTAAAGCAGTGAGAAACTATT ATTTCAGCAGAAAAGTAGTAGGTTTGGATCACCTGATATACAATCAATGCAATACAAGGA GGAGATGCCACACAAAACTTTATTTGTTACAGGGTGGAAATCGTGATCTTAATCCTCGAA CATCGAGGATATTACACCTTTTGCCTTTTGCTTCTGCTGAGGATGGGGTGTCGGTCAATG GTAGTTCCAGACCAACTACAAGCAGTGATATGGAGGAAATGAGACTAAAACTAGATATAT CTCTGCAAGGTGAAGATAATGGTTCTGGACTTGTCCAATCGCTGCATGATGCTGCAAGAG TAATTGAGCTAGGACTTAGACAACAAGGCTCATTATCCAGGGTATCCTGGTTTTCAACTG CCTGGTTGGGCGGTGATAGAACTATTTGGATCAAGGAGCTATCTTATCAGGCATCTGTAT ACTCTCTACTTCAAGCAGCAATTGAGATTTTATCTCGAGGAGATGAAAGAGATAATGATA TCAACATTTTCACGCAGAGGAGTTTATCAAGGCAATCTGCTCCTTTGGAGAGCTTGATTA GAGATAGTTTATTAGCCAAGCAACCTGAAGCTTATGATTGGTTTTGGTCTGAGCAAATTC CAGTAGTGGTTACCACCTTTGTGAATTACTTTGAGAAGGATCTGCGATTTGCTGCTGCTA CTGCAGAGACCAGAAAGCAAACATCTCTATCTCCTCGAAATGCAAGTGATGTATCACTCC TTATGCTTGCACTCAGTTGCATTGCAGCGATTATGAAACTTGGTGCTGCAAAACTGTCGT GTACACAATTTTCGTCTCTTGTTCCAGACACACTTGGAAGATTGATGGACATGCTTGTCG AATTTATTCCTCTCCGACAGGCTTATCATTCCGTGAAGCCTATTGGTCTGCGTAGAGAAT TTCTTGTCCATTTTGGTCCCAGAGCTGCAGCATGTAGAGTACAAAATGAATCAGGAACTG AAGAGGTTATATTCTGGGTGAGTCTTGTCCAAAAGCAGCTTCAACGAGCTATAGATCGAG AGAGAATATGGTCCAGACTCACCACAAGTGAGAGTATCGAGGTTCTGGAAAAGGATCTGG CCATATTTGGTTTCTTTATTGCTTTGGGAAGAAGCACAAAGGCTTTTCTTTCTGAAAATG GATTTGATACTCTTGACGAGCCAATTGAAGAATTAATTAGGTATCTAATTGGGGGCAGTG TACTGTATTATCCTCAACTTGCATCAATAAGTTCTTATCAACTGTACGTGGAGGTTGTGT GTGAAGAGCTAGACTGGCTTCCTTTTTATCCAGGCATTACTGCTAATTTTATCCGTAATA CTGGGCACAAAAGTAAACAAGAAGTTCCTCCAAATTTAGAAGCCATTCCACTAGTATTAG ACGTGTGCTCTTACTGGATCCAGAGTTTCATTAAATATAGTAAATGGCTGGAGAACCCTT CTCATGTCAAGGCAGCAAGATTCCTTTCAACTGGGCACAACAAGCTTAAGAAGTGCAGAG AGGATCTCGGAATTGAGAAGACTCGCGTGGGAGCTTATTCACAGATCAAGAAAGAAACAG ATTCCTTTGATAAGGCACTGGAGAGTGTCGAAGAGGCTTTGGTAAGGCTAGAGGTATTGC TTCAAGAACTGCATATGTCAAGTGCTAGTTCACAGAAGGAGCACTTGAAAGCTGCATGTT CTGACCTTGAAAGGATTCGTAGAATTAAAAAAGAGGCTGAATTTCTTGAGGTTTCATTTA GAACGAAGGCAGCTTTCCTACAGCAGGAGGAAGATGCTACTATGTCTACATCATCAAGTG GGGACAAGCAACAGTTCTCTAAACGCAAGGACAACAAGGATGGTCAAAATAGGAGTGGGA ATAACAGGATACAGGGATTATGGAGCTTCGTTGGTCGTCGGCCTAGCAAATCAGCAGACC AGGCATCATCGACTCCTAATGAGATTAGTGATGATGGCTCTAAAGAACTTTCAGAGAGTA CAGGCGTTATGGATTCAAAGTCAACTGAAGTTCGAAGGTTTGAACTATTAAGGAGTGAGC TAATGGAACTGGAGAAGCGGGTTCAAAGAAGTGCTGATCAATATGAGTATGAGGAGGAGG AAAGTCAGAAGGTGGATCGCACTTCCACGCATCCTGCAGGAGCTGAAAGAACTCAATTGG TTCTTCAGAAGAAAAAGGAGAGTGTTATTGAGAAATCCTTAGACAAACTGAAAGAAACTA GCACGGATGTTTGGCAAGGAACTCAGCTTCTCGCTATCGATGTTGCTGCAGCTTTAGGGC TACTTCGGAGGTCCATAGTAGGGGATGAGTTGACAGAAAAAGAGAAACAAGCATTGCGGA GAACTTTAACTGACTTGGCATCAGTTGTACCTATTGGATTTCTTATGCTTCTCCCTGTTA CAGCAGTTGGGCATGCTGCTATGTTGGCTGGAATTCGAAGATATATGCCATCTCTGATAC CTTCTACATATGGACCAGACAGATTAGCCCTCCTAAGGCAGCTTGAGAAAGTCAAGGAAA TGGGAACTGAGGTGAATCCAACTGAAAAGGCTGATGAATAGCCCAGGTTAAAGCATACGA AAACAGCTATTCATATAGTTCCACCGTCAAATTCATTTCAACTTGGTTTTATATCCATTC AACAGTAGATAGGCGTAAAGAAGTTCATTCCAAGAGTCTGGCACTCCCGGTAGGCACCAG TGGCTGCAGTCTTGTGGCGCACCAGCCGGGGTGCCAGGTTCACGATATTCTGAAGGGTGA CCATCTTTCCTGAACTCACTTAGATATGTGATGTTTAGGAAGGTCATGTTTCTTCTTGTA TTTTGCATTTTCTCAACTACCTCAGAAATGAATATGTTGTTGGTTGGCTCTTTCTCCAGC TTAGTATAGTCTGTTTCCGGTGCTGTATTTGTGTGGCAATGGCCACCTTCATTCCAAGCT CCATCCCTGCAAATCAATTTCACCAAATTCAGTCTTAGTATAGTGTATTTGTGTTGCAAC TGATTAGTTCCTACAAAGTACTTACCTGTAGTGTACTGGTGAAACGCTACGGAAGAAGAT GTGACTCTTTTCAGGCTTGGTATTTTGAATCACCCATGACGCCCAAGTACTCAATGATCT TTGAAAAGCTTCCACTACATTCATCGTCATGTTCACCGTTGTTCCTTCTTGGAAATGGAT GCCCCTGCAATACATTTTGTGTTATGTTAGTGATTGCTGAAGTTCTTATGGTCAAAAGAA TCCAGATATATGTGATTATTGCTAAAGCACTTGAGATTCATACATGTTAATAGTTTTATC TTCATTCCACCAATGTCCAGCATTGAATATAATTACATCTGCATTAACCCACTTTGTGAA ATACCAATGCAGCTTATCAAGCCTGATCACTCCCCTCACTTCTTTCGATGCATTCGCGGG AGGACGATCAACGACTACTAAGAAAGCAAACACTATTCGACCATTTCGACTACGTTCGAG GAAATCCTTTGCATTGAACCTGCAACATTGAAATGTTAGTCCTTGGGTCCATTTTCTACT ATACCGGATTATACCAGATGAGTTCAATTTAGTTAGGGTTCTTGAAGAATACTTTATATC AAATTCTAGTTTCACGTCTAAGAATAATATATTTGCTTGAATAGGTGTCTTAAATATCGC ACAAATTCTTGGGATGTTCATAAAGAGATCAAAGATATAAACAAACAAATATTTCAACCA TTAAATCACGAAGAAAATTCATAGATCAAGAGGAACATAAAGAAAATGT