Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g009970.3.1
CDS Infomation

Rho GTPase-activating protein gacA (AHRD V3.3 *** A0A151TVS8_CAJCA)
Sequence

ATGACTGAAATTATACAACCCCAACATGAGTTACCTTCAGCTTCAAGCTCCATTAGTATA
CTACCATGTTTAGTTGCTAGGGATAATGATGGGTCTCACCAAGAGAGTGTAATTAGTGGA
CCCAATGTGTATTCTGTTGTAGATGTATACAGAGGGGGAGATAATAGTGAGGTAGAAGTA
AGAGGAGTTAGTATTTCTGGTAGAAAAAGAGAGAGAAAAAGGAGAGAAAGAGAAGAAGGG
GGAGATCAGCTGTCTTTGTTAACACTTTGTTTAACTGGTTTTAGGAAATCTTTGGTTGCT
TGTAAGAGCAACTTTGATATTATTAGTGGTGTTGGTGTTGAAGAGCTGCTTTCTTCATCT
TGTTCTGGTTTTAGTTCTAGTTCTGCTAATTCATCAATGGAGATTAGTTGGCCTAGTAAT
GTCAGACATGTTGCTCATGTCACTTTTGATAGGTTTAATGGATTTCTTGGTCTTCCTGTT
GAGTTTGAACCTGAAGTACCTAGAAGACCCCCAAGTGCCAGTACAAGAGTCTTTGGAGTT
TCGACAGATTGCATGCAGCTTTCATTTGACTCTCGAGGAAATAGTGTCCCCACAATCCTT
CTGATGATGCAAGGGCGCTTATACGTTCAAGGTGGCTTGCAGGCTGAAGGGATCTTCAGG
ATCAATGCCGAAAATGGCCAAGAAGAATTTGTCAGGGAGCAGCTAAATAGGGGGATTATT
CCAGATAACATTGACGTCCATTGCTTAGCAGGTCTTATAAAGGCTTGGTTCAGAGAGTTG
CCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTGCTCAATCGGAAGAA
GAGTGTGTGCGGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTATTAGATTGGGCT
ATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAAATGAATGCACGTAAT
ATCGCTATGGTGTTTGCTCCAAATATGACACAGATGGCAGATCCGTTGACTGCTTTGATG
TATGCAGTTCAAGTTATGAACTTTCTCAAAACTCTTATTCTCCGGACTTTGAAAGACCGA
GAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAACTGGAGCCTTTCGATGAAAATGGA
CATCATAGTGCTTCACAACCAATAGTTCAGAAGTCTAACGAGATCGAGGAGGATATCCTT
ATATCCAAAGAACGACCCTCAAGTGGCGCTGCTAATTCTGCCCTCAGAGAGATAATAGTT
GAGAATAAATCCCATGGATTACCATGTACCATAGAGAACGTTCTTCAGAAAGATGCGTTC
GTTGATTGTCTCAGTGAAATCTCAAACCTACCAGACAGCACAAAGGATGATGAGCTTGGA
TCTGGTAACATCAATTCTACAAGTGGAAGAAGTCAACCAAAAATCCGAAGGACTAAAAGC
GTGCATTCGAGCAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGCCAATAGGT
CACATATCTGGTAGTTTAGAGAAGGGCAAAGGAGTCAGAATCATCGATAGGTTGAATTCG
ACAACAGAAAGGGTGGAAGCATGGCGATGA

Peptide Sequence

PEP ID

Solyc09g009970.3.1
PEP Infomation

Rho GTPase-activating protein gacA (AHRD V3.3 *** A0A151TVS8_CAJCA)
Sequence

MTEIIQPQHELPSASSSISILPCLVARDNDGSHQESVISGPNVYSVVDVYRGGDNSEVEV
RGVSISGRKRERKRREREEGGDQLSLLTLCLTGFRKSLVACKSNFDIISGVGVEELLSSS
CSGFSSSSANSSMEISWPSNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRPPSASTRVFGV
STDCMQLSFDSRGNSVPTILLMMQGRLYVQGGLQAEGIFRINAENGQEEFVREQLNRGII
PDNIDVHCLAGLIKAWFRELPTGVLDSLSPEEIMRAQSEEECVRLVRLLPPTEAALLDWA
INLMADVAQLESFNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLILRTLKDR
EETVVEAGPAPELEPFDENGHHSASQPIVQKSNEIEEDILISKERPSSGAANSALREIIV
ENKSHGLPCTIENVLQKDAFVDCLSEISNLPDSTKDDELGSGNINSTSGRSQPKIRRTKS
VHSSSSSLKGSKKMIEWPIGHISGSLEKGKGVRIIDRLNSTTERVEAWR*

Transcript Sequence

Transcript ID

Solyc09g009970.3.1
Transcript Infomation

Rho GTPase-activating protein gacA (AHRD V3.3 *** A0A151TVS8_CAJCA)
Sequence

TTGCTACTTCACCCCTAACTCTTATTTATTACTATTATAATATCAATTAATATCCTAAAC
ACATTTTATAAAGAGGAAAACATCCAAAAAGTGCCATGGTAGAGGAGCCAAATCCAACTA
AGCTAGTCTTCTTCTATTCCCCATTTTAATTCCAAAACAACAAGCTCTATTATAAACTAA
TCCCCTTCTTTCTATAGTATAGTTTCTTTCTCTTTTTTCTCCTCGAACTATACCATATTC
TCCCTTACTCCCCTATTGAGTTTTTTTCATATAAAGAATTGAAGTGCTTCCATAAAATAA
GGAGAAGAAAATGAAAATGTATTGAAAGTGATGATGATATTAATGTCTCACCTTCCAAAA
ACCAAACTTTGCTTGAATCCAACTCTACTCAAACCCCATTTCTACTAATCTACCAAACTT
ATCATAAAGAAGGGTTTTACTCAAGTTGTTGTAAATTTTTCACCAAACTTTTCTTGCTTC
TTGTTATACAATTAAAACCCACCAAGAAAAATCCAATCTTTATATAAAAATCCAATCTTT
AAATAAAAAAAAGGATTTTTTTTTTGTGGGTTTCTTGAAAATGATTGATATTATAAGGTA
GGAGCTTTTCTTGATTTGTTCTACCATTAAATTTAGAACCCACCAAAAAAAAAAAACCCA
ATCTTTAAATAAAAAAAGGATTTTTTTTGTGGGTTTCTTGAAAATGACTGAAATTATAAG
GTAGGAGCTTTTTCTTGATTTGTTGTACCATTAAAAATCCAATCTTTTTTATTGTGGGTT
TCTTGAAAATGACTGAAATTATACAACCCCAACATGAGTTACCTTCAGCTTCAAGCTCCA
TTAGTATACTACCATGTTTAGTTGCTAGGGATAATGATGGGTCTCACCAAGAGAGTGTAA
TTAGTGGACCCAATGTGTATTCTGTTGTAGATGTATACAGAGGGGGAGATAATAGTGAGG
TAGAAGTAAGAGGAGTTAGTATTTCTGGTAGAAAAAGAGAGAGAAAAAGGAGAGAAAGAG
AAGAAGGGGGAGATCAGCTGTCTTTGTTAACACTTTGTTTAACTGGTTTTAGGAAATCTT
TGGTTGCTTGTAAGAGCAACTTTGATATTATTAGTGGTGTTGGTGTTGAAGAGCTGCTTT
CTTCATCTTGTTCTGGTTTTAGTTCTAGTTCTGCTAATTCATCAATGGAGATTAGTTGGC
CTAGTAATGTCAGACATGTTGCTCATGTCACTTTTGATAGGTTTAATGGATTTCTTGGTC
TTCCTGTTGAGTTTGAACCTGAAGTACCTAGAAGACCCCCAAGTGCCAGTACAAGAGTCT
TTGGAGTTTCGACAGATTGCATGCAGCTTTCATTTGACTCTCGAGGAAATAGTGTCCCCA
CAATCCTTCTGATGATGCAAGGGCGCTTATACGTTCAAGGTGGCTTGCAGGCTGAAGGGA
TCTTCAGGATCAATGCCGAAAATGGCCAAGAAGAATTTGTCAGGGAGCAGCTAAATAGGG
GGATTATTCCAGATAACATTGACGTCCATTGCTTAGCAGGTCTTATAAAGGCTTGGTTCA
GAGAGTTGCCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTGCTCAAT
CGGAAGAAGAGTGTGTGCGGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTATTAG
ATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAAATGAATG
CACGTAATATCGCTATGGTGTTTGCTCCAAATATGACACAGATGGCAGATCCGTTGACTG
CTTTGATGTATGCAGTTCAAGTTATGAACTTTCTCAAAACTCTTATTCTCCGGACTTTGA
AAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAACTGGAGCCTTTCGATG
AAAATGGACATCATAGTGCTTCACAACCAATAGTTCAGAAGTCTAACGAGATCGAGGAGG
ATATCCTTATATCCAAAGAACGACCCTCAAGTGGCGCTGCTAATTCTGCCCTCAGAGAGA
TAATAGTTGAGAATAAATCCCATGGATTACCATGTACCATAGAGAACGTTCTTCAGAAAG
ATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTACCAGACAGCACAAAGGATGATG
AGCTTGGATCTGGTAACATCAATTCTACAAGTGGAAGAAGTCAACCAAAAATCCGAAGGA
CTAAAAGCGTGCATTCGAGCAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGGC
CAATAGGTCACATATCTGGTAGTTTAGAGAAGGGCAAAGGAGTCAGAATCATCGATAGGT
TGAATTCGACAACAGAAAGGGTGGAAGCATGGCGATGAACAACGTCTCGCCTCAAGGGGC
TATTGTTGCTACCTCATCAAGAAGTTAAATGGTTGTGATTTATGTTTGGAAAAAAAAGAA
GAAGACAATGTATTATCCAGTTATGTTTGTGCTTGGATATTGGTTACTTTCTTAGTAGTT
CAACAGGAATTCTGTCACCTTTCTCTCTAGTCATGTTTGGCTGGGGAAACTAGCAGGATG
AATGTAATTTATGTTTTTTTTTTTTTAGAATGAATATTGTTTTGGTTTCCAATTTCAATA
TGATTTTCTTCAATTTGACATAAACAAGTGATTACTAGTGTTTTC