Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g009940.3.1
CDS Infomation

Signal recognition particle 54 kDa protein (AHRD V3.3 *** W9R2A9_9ROSA)
Sequence

ATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCACCATTTCTTTCCACTTTCT
AAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAATTCTTCTTCTTCTTGGATT
GGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATTTACTAGGGATACATGGAGG
GTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGGAGTTATTAGAGCTGAGATG
TTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAAGCTCAAAGGAGAAGAGGTT
TTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAGGAGGGCTCTTTTAGAAGCT
GATGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGTTAGTGAAGAAGCCGTTGGC
ACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGTTAAGACTGTACGTGACGAG
CTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTTTGCTAAATCTAAGCCCACC
GTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAACTGTTAGTGCAAAGTTAGCT
TTATATCTAAAGAAGCAGGGTAAGAGTTGCATGCTGATTGCTGGAGACGTGTACAGACCT
GCTGCTATTGACCAACTTGTTATTTTGGGTAAACAGGTTGATGTACCTGTTTATGCAGCA
GGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATTACAAGAGGCCAAAAAGAAG
AATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCAGATAGATAAAACTATGATG
GATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGAGGTTTTACTTGTTGTGGAT
GCAATGACTGGCCAAGAAGCTGCAGCTTTGGTCACAACATTCAATCTCGAAATTGGAATT
ACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGGTGGAGCAGCTTTAAGTGTC
AAGGAGGTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGGTGAACGTATGGAGGACCTT
GAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGGAATGGGAGATGTTCTATCG
TTTGTTGAGAAAGCCCAAGAAGTTATGCGTCAAGAAGATGCTGAAGATTTGCAGAAGAAG
ATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCAAACTCGGGCAGTTGCTAGG
ATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCATGGGAAAGGTTACTCCTGCA
CAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTCAATGATAGATGTCATGACA
CCAGAGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCCTGCTAGAAGGAAACGTATC
GCTCAAGAATCTGGGAAAACTGAGCAACAGGTGAGTCAACTTGTTGCTCAACTTTTTCAA
ATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGGTGGTTCGATTCCTGCACTG
AGTAATCTAGAGGAGGCACTAAAATCTGAACAGCAGGCTCCTCCCGGTACTGCAAGGAGG
AAGCGAAGGTCAGAACCAAGGAAACAATTTGCAGACTCGGGATCAGCTAGGCCTAGCCCT
CGTGGTTTCGGGGCCAAGAACTGA

Peptide Sequence

PEP ID

Solyc09g009940.3.1
PEP Infomation

Signal recognition particle 54 kDa protein (AHRD V3.3 *** W9R2A9_9ROSA)
Sequence

MEATASFTSTMASHHFFPLSKATLSSSKLNPTCNSSSSWIGSTHSLSFSSRNSFTRDTWR
VINSKNVVRREMSGVIRAEMFGQLTSGLENAWNKLKGEEVLTKENIVEPMRDIRRALLEA
DVSLPVVRRFVQSVSEEAVGTGLIRGVKPDQQLVKTVRDELVKLMGGEVSELVFAKSKPT
VILLAGLQGVGKTTVSAKLALYLKKQGKSCMLIAGDVYRPAAIDQLVILGKQVDVPVYAA
GTDVKPAEIARQGLQEAKKKNVDVVIMDTAGRLQIDKTMMDELKDVKRVLNPTEVLLVVD
AMTGQEAAALVTTFNLEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDL
EPFYPDRMAGRILGMGDVLSFVEKAQEVMRQEDAEDLQKKIMSAKFDFNDFLKQTRAVAR
MGTMSRVIGMMPGMGKVTPAQIREAEKSLKIMESMIDVMTPEEREQPELLAESPARRKRI
AQESGKTEQQVSQLVAQLFQMRVRMKNLMGVMEGGSIPALSNLEEALKSEQQAPPGTARR
KRRSEPRKQFADSGSARPSPRGFGAKN*

Transcript Sequence

Transcript ID

Solyc09g009940.3.1
Transcript Infomation

Signal recognition particle 54 kDa protein (AHRD V3.3 *** W9R2A9_9ROSA)
Sequence

AATGGATAAAGCATAAAAGAAGAAGAAAAAAGCTTCAATTTTTGCTTCTTCTTTTGATTG
TTTGTTCTTTAATCCTACCATGGAAGCCACTGCTTCTTTCACTTCAACTATGGCTTCTCA
CCATTTCTTTCCACTTTCTAAAGCCACCCTTTCATCTTCTAAACTTAATCCCACTTGTAA
TTCTTCTTCTTCTTGGATTGGTTCTACTCATTCTCTTTCATTTTCTTCAAGAAATTCATT
TACTAGGGATACATGGAGGGTGATCAATTCCAAGAATGTGGTAAGAAGGGAAATGAGTGG
AGTTATTAGAGCTGAGATGTTTGGGCAGCTCACTAGCGGATTGGAAAATGCTTGGAACAA
GCTCAAAGGAGAAGAGGTTTTGACCAAGGAAAACATCGTGGAACCTATGAGGGACATCAG
GAGGGCTCTTTTAGAAGCTGATGTTAGTCTCCCAGTTGTCAGAAGGTTTGTTCAGTCTGT
TAGTGAAGAAGCCGTTGGCACTGGTTTGATTCGAGGTGTAAAACCAGATCAGCAACTAGT
TAAGACTGTACGTGACGAGCTTGTGAAACTGATGGGTGGAGAGGTTTCTGAACTGGTTTT
TGCTAAATCTAAGCCCACCGTAATACTATTGGCCGGTCTACAAGGTGTTGGGAAGACAAC
TGTTAGTGCAAAGTTAGCTTTATATCTAAAGAAGCAGGGTAAGAGTTGCATGCTGATTGC
TGGAGACGTGTACAGACCTGCTGCTATTGACCAACTTGTTATTTTGGGTAAACAGGTTGA
TGTACCTGTTTATGCAGCAGGAACAGATGTAAAACCTGCAGAAATAGCCCGACAAGGATT
ACAAGAGGCCAAAAAGAAGAATGTAGATGTAGTCATAATGGATACAGCTGGAAGACTTCA
GATAGATAAAACTATGATGGATGAATTAAAAGACGTGAAACGGGTACTGAACCCCACAGA
GGTTTTACTTGTTGTGGATGCAATGACTGGCCAAGAAGCTGCAGCTTTGGTCACAACATT
CAATCTCGAAATTGGAATTACTGGTGCCATCTTGACGAAGCTAGATGGAGATTCTAGGGG
TGGAGCAGCTTTAAGTGTCAAGGAGGTATCAGGAAAGCCAATCAAGCTCGTAGGAAGGGG
TGAACGTATGGAGGACCTTGAACCTTTCTATCCTGACCGCATGGCTGGACGTATTTTAGG
AATGGGAGATGTTCTATCGTTTGTTGAGAAAGCCCAAGAAGTTATGCGTCAAGAAGATGC
TGAAGATTTGCAGAAGAAGATCATGAGTGCAAAATTTGATTTCAATGACTTCCTGAAGCA
AACTCGGGCAGTTGCTAGGATGGGTACCATGTCGCGTGTTATTGGTATGATGCCTGGCAT
GGGAAAGGTTACTCCTGCACAAATTCGAGAGGCAGAGAAGAGCTTAAAGATAATGGAGTC
AATGATAGATGTCATGACACCAGAGGAGAGGGAGCAACCAGAATTGTTAGCAGAATCTCC
TGCTAGAAGGAAACGTATCGCTCAAGAATCTGGGAAAACTGAGCAACAGGTGAGTCAACT
TGTTGCTCAACTTTTTCAAATGCGTGTACGTATGAAGAATTTGATGGGCGTTATGGAAGG
TGGTTCGATTCCTGCACTGAGTAATCTAGAGGAGGCACTAAAATCTGAACAGCAGGCTCC
TCCCGGTACTGCAAGGAGGAAGCGAAGGTCAGAACCAAGGAAACAATTTGCAGACTCGGG
ATCAGCTAGGCCTAGCCCTCGTGGTTTCGGGGCCAAGAACTGAAGTATAAGACTAGTATG
TCAAACAAATTTTTGAATCTTTGACTAGCTATCTATGAGTATCAACTAGAAAAAGGAATT
GTGAGCAAAAAAGGAAATGATCAACTAGAAAAGGGAAGTTCTTGACAAGATATTTTGTCC
CTCTTCTTGTGTAACTATTGTCTTCTTGATATATCTTATTATCTTGTAATCTTGAAAATT
TCATTGTTTTTCCCACTCCTTTAAATTTTACATT