Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g009190.3.1
CDS Infomation

Starch branching enzyme (AHRD V3.3 *** Q9XIS5_PHAVU)
Sequence

ATGGTGTATACACTCTCTGGAGTTCGTTTTCCTACTGTTCCATCAGTGTACAAATCTAAT
GGATTCACCAGCAGTAATGGTGATCGGAGGAATGCTAATGTTTCTGTATTCTTGAAAAAG
CACTCTCTTTCACGGAAGATCTTGGCTGAAAAGTCTTCTTACGATTCCGAATCCCGACCT
TCTACAGTTGCAGCATCGGGGAAAGTCCTTGTGCCTGGAACCCAGAGTGATAGCTCCTCA
TCTTCAACAGACCAATTTGAGTTCACTGAGACAGCTCCAGAAAATTCCCCGGCATCAACT
GATGTAGATAGTTCAACAATGGAACAAGCTAGCCAGATTAAAACTGAGAATGGTGACGTT
GAGCCGTCAAGAAGTACTGAAGAGCTGGAATTTGCTTCATCACTACAACTACAAGAAGGT
GGTAAAGTGGAGGAGTCTAAAACATTAGATACTTCTGAAGAGACAATTAGTGATGAATCT
AATAGGATCAGAGAGAAGGGCATACCTCCACCTGGACTTGGTCAGAAGATTTATGAAATA
GACCCTCTTTTGACAAACTATCGTCAACACCTTGATTACAGGTATTCACAGTACAAGAAA
ATGAGGGAGGCAATTGACAAGTATGAGGGTGGTTTGGAAGCTTTTTCTCGTGGTTACGAA
AAAATGGGTTTCACTCGTAGTGATACAGGTATCACTTACCGTGAGTGGGCTCCTGGTGCC
CAGTCAGCTGCCCTCATTGGAGATTTCAACAATTGGGACGCAAATGCTGACATTATGACT
CGGAATGAATTTGGTGTCTGGGAGATTTTTCTGCCAAATAATGTGGATGGTTCTCCTGCA
ATTCCTCATGGGTCCAGAGTGAAGATACGTATGGACACTCCATCAGGTGTTAAGGATTCC
ATTCCCGCTTGGATCAACTACTCTTTACAGCTTCCTGATGAAATCCCATATAATGGAATA
TATTATGATCCACCCGAAGAGGAGAGGTATATCTTCCAACACCCACGGCCAAAGAAACCA
AAGTCGCTGAGAATATATGAATCTCATATTGGAATGAGTAGTCCGGAGCCTAAAATTAAC
ACATACGTGAATTTTAGAGATGAAGTTCTTCCTCGCATAAAAAAGCTTGGGTACAATGCG
GTGCAAATTATGGCTATTCAAGAGCATTCTTATTATGCTAGTTTTGGTTATCATGTCACA
AATTTTTTTGCACCAAGCAGCCGTTTTGGAACACCAGATGACCTTAAGTCTTTGATTGAT
AAAGCTCATGAGCTAGGAATTGTTGTTCTCATGGACATTGTTCACAGCCATGCATCAAAT
AATACTTTAGATGGACTCAACATGTTTGACGGCACAGATAGTTGTTACTTTCACTCTGGA
GCTCGTGGTTATCATTGGATGTGGGATTCCCGCCTCTTTAACTATGGAAACTGGGAGGTA
CTTAGGTATCTTCTCTCAAATGCGAGATGGTGGTTGGATGAGTTCAAATTTGATGGATTT
AGATTTGATGGTGTGACATCAATGATGTATACTCACCACGGATTATCGGTGGGATTCACT
GGGAACTACGAGGAATACTTTGGACTCGCAACTGATGTGGATGCTGTTGTGTATCTGATG
TTGGTCAACGATCTTATTCACGGGCTTTTCCCAGATGCAATTACTATTGGTGAAGATGTT
AGCGGAATGCCGGCGTTTTGTATTCCCGTTCAAGATGGGGGTGTTGGCTTTGACTATCGG
CTGCACATGGCAATTGCTGATAAATGGATTGAATTGCTTAAGAAACGGGATGAGGATTGG
AGAGTTGGTGATATTGTTCATACACTGACAAATAGAAGATGGCTGGAAAAGTGTGTTTCA
TACGCTGAAAGTCATGATCAAGCTCTAGTCGGTGATAAAACTATAGCATTCTGGCTGATG
GACAAGGATATGTATGATTTTATGGCTCTGGATAGACCGTCAACACCATTAATAGATCGT
GGAATAGCATTGCACAAGATGATTAGGCTTGTAACTATGGGATTAGGAGGAGAAGGGTAC
CTAAATTTCATGGGAAATGAATTCGGCCACCCTGAGTGGATTGATTTCCCTAGGGCTGAG
CAACACCTCCCTGATGGCTCAGTAATTCCCGGAAACCAATTCAGTTATGATAAATGCAGA
CGGAGATTTGACCTGGGAGATGCGGATTATTTAAGATACCACGGGTTGCAAGAATTTGAC
CGGGCTATGCAGTATCTTGAAGATAAATATGAGTTTATGACTTCAGAACATCAGTTCATA
TCACGAAAGGATGAAGGAGATAGGATGATTGTATTTGAAAGAGGAAACCTAGTTTTTGTC
TTTAATTTTCACTGGACAAATAGCTATTCAGACTATCGCATAGGCTGCCTAAAACCTGGA
AAATACAAGGTTGTCTTGGACTCAGATGATCCACCTTTTGGTGGCTTCGGGAGAATTGAT
CATAATGCCGAATATTTCACCTTTGTAAGTTAA

Peptide Sequence

PEP ID

Solyc09g009190.3.1
PEP Infomation

Starch branching enzyme (AHRD V3.3 *** Q9XIS5_PHAVU)
Sequence

MVYTLSGVRFPTVPSVYKSNGFTSSNGDRRNANVSVFLKKHSLSRKILAEKSSYDSESRP
STVAASGKVLVPGTQSDSSSSSTDQFEFTETAPENSPASTDVDSSTMEQASQIKTENGDV
EPSRSTEELEFASSLQLQEGGKVEESKTLDTSEETISDESNRIREKGIPPPGLGQKIYEI
DPLLTNYRQHLDYRYSQYKKMREAIDKYEGGLEAFSRGYEKMGFTRSDTGITYREWAPGA
QSAALIGDFNNWDANADIMTRNEFGVWEIFLPNNVDGSPAIPHGSRVKIRMDTPSGVKDS
IPAWINYSLQLPDEIPYNGIYYDPPEEERYIFQHPRPKKPKSLRIYESHIGMSSPEPKIN
TYVNFRDEVLPRIKKLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPDDLKSLID
KAHELGIVVLMDIVHSHASNNTLDGLNMFDGTDSCYFHSGARGYHWMWDSRLFNYGNWEV
LRYLLSNARWWLDEFKFDGFRFDGVTSMMYTHHGLSVGFTGNYEEYFGLATDVDAVVYLM
LVNDLIHGLFPDAITIGEDVSGMPAFCIPVQDGGVGFDYRLHMAIADKWIELLKKRDEDW
RVGDIVHTLTNRRWLEKCVSYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPSTPLIDR
GIALHKMIRLVTMGLGGEGYLNFMGNEFGHPEWIDFPRAEQHLPDGSVIPGNQFSYDKCR
RRFDLGDADYLRYHGLQEFDRAMQYLEDKYEFMTSEHQFISRKDEGDRMIVFERGNLVFV
FNFHWTNSYSDYRIGCLKPGKYKVVLDSDDPPFGGFGRIDHNAEYFTFVS*

Transcript Sequence

Transcript ID

Solyc09g009190.3.1
Transcript Infomation

Starch branching enzyme (AHRD V3.3 *** Q9XIS5_PHAVU)
Sequence

ACAAAGGTATAAATAAAATCTCTGTTTTTTTTTTCAGTAAATAAAAATCTCTTCCACTCA
GTCTTTGTTTCTCTCTCTCTCTTCACGCTTCTCTTGGCGCCTTGAACTCAGCAATTTGAC
ACTCAGTTAGTTACACTCCTATCACTTATCAGATCTCTATTTTTCCTCTTAATTCTAACC
AAGGAATGATTAAAAACATAGATTTGTAAAAACCCTAAGGAGAGAAGAAGAAGAAAGATG
GTGTATACACTCTCTGGAGTTCGTTTTCCTACTGTTCCATCAGTGTACAAATCTAATGGA
TTCACCAGCAGTAATGGTGATCGGAGGAATGCTAATGTTTCTGTATTCTTGAAAAAGCAC
TCTCTTTCACGGAAGATCTTGGCTGAAAAGTCTTCTTACGATTCCGAATCCCGACCTTCT
ACAGTTGCAGCATCGGGGAAAGTCCTTGTGCCTGGAACCCAGAGTGATAGCTCCTCATCT
TCAACAGACCAATTTGAGTTCACTGAGACAGCTCCAGAAAATTCCCCGGCATCAACTGAT
GTAGATAGTTCAACAATGGAACAAGCTAGCCAGATTAAAACTGAGAATGGTGACGTTGAG
CCGTCAAGAAGTACTGAAGAGCTGGAATTTGCTTCATCACTACAACTACAAGAAGGTGGT
AAAGTGGAGGAGTCTAAAACATTAGATACTTCTGAAGAGACAATTAGTGATGAATCTAAT
AGGATCAGAGAGAAGGGCATACCTCCACCTGGACTTGGTCAGAAGATTTATGAAATAGAC
CCTCTTTTGACAAACTATCGTCAACACCTTGATTACAGGTATTCACAGTACAAGAAAATG
AGGGAGGCAATTGACAAGTATGAGGGTGGTTTGGAAGCTTTTTCTCGTGGTTACGAAAAA
ATGGGTTTCACTCGTAGTGATACAGGTATCACTTACCGTGAGTGGGCTCCTGGTGCCCAG
TCAGCTGCCCTCATTGGAGATTTCAACAATTGGGACGCAAATGCTGACATTATGACTCGG
AATGAATTTGGTGTCTGGGAGATTTTTCTGCCAAATAATGTGGATGGTTCTCCTGCAATT
CCTCATGGGTCCAGAGTGAAGATACGTATGGACACTCCATCAGGTGTTAAGGATTCCATT
CCCGCTTGGATCAACTACTCTTTACAGCTTCCTGATGAAATCCCATATAATGGAATATAT
TATGATCCACCCGAAGAGGAGAGGTATATCTTCCAACACCCACGGCCAAAGAAACCAAAG
TCGCTGAGAATATATGAATCTCATATTGGAATGAGTAGTCCGGAGCCTAAAATTAACACA
TACGTGAATTTTAGAGATGAAGTTCTTCCTCGCATAAAAAAGCTTGGGTACAATGCGGTG
CAAATTATGGCTATTCAAGAGCATTCTTATTATGCTAGTTTTGGTTATCATGTCACAAAT
TTTTTTGCACCAAGCAGCCGTTTTGGAACACCAGATGACCTTAAGTCTTTGATTGATAAA
GCTCATGAGCTAGGAATTGTTGTTCTCATGGACATTGTTCACAGCCATGCATCAAATAAT
ACTTTAGATGGACTCAACATGTTTGACGGCACAGATAGTTGTTACTTTCACTCTGGAGCT
CGTGGTTATCATTGGATGTGGGATTCCCGCCTCTTTAACTATGGAAACTGGGAGGTACTT
AGGTATCTTCTCTCAAATGCGAGATGGTGGTTGGATGAGTTCAAATTTGATGGATTTAGA
TTTGATGGTGTGACATCAATGATGTATACTCACCACGGATTATCGGTGGGATTCACTGGG
AACTACGAGGAATACTTTGGACTCGCAACTGATGTGGATGCTGTTGTGTATCTGATGTTG
GTCAACGATCTTATTCACGGGCTTTTCCCAGATGCAATTACTATTGGTGAAGATGTTAGC
GGAATGCCGGCGTTTTGTATTCCCGTTCAAGATGGGGGTGTTGGCTTTGACTATCGGCTG
CACATGGCAATTGCTGATAAATGGATTGAATTGCTTAAGAAACGGGATGAGGATTGGAGA
GTTGGTGATATTGTTCATACACTGACAAATAGAAGATGGCTGGAAAAGTGTGTTTCATAC
GCTGAAAGTCATGATCAAGCTCTAGTCGGTGATAAAACTATAGCATTCTGGCTGATGGAC
AAGGATATGTATGATTTTATGGCTCTGGATAGACCGTCAACACCATTAATAGATCGTGGA
ATAGCATTGCACAAGATGATTAGGCTTGTAACTATGGGATTAGGAGGAGAAGGGTACCTA
AATTTCATGGGAAATGAATTCGGCCACCCTGAGTGGATTGATTTCCCTAGGGCTGAGCAA
CACCTCCCTGATGGCTCAGTAATTCCCGGAAACCAATTCAGTTATGATAAATGCAGACGG
AGATTTGACCTGGGAGATGCGGATTATTTAAGATACCACGGGTTGCAAGAATTTGACCGG
GCTATGCAGTATCTTGAAGATAAATATGAGTTTATGACTTCAGAACATCAGTTCATATCA
CGAAAGGATGAAGGAGATAGGATGATTGTATTTGAAAGAGGAAACCTAGTTTTTGTCTTT
AATTTTCACTGGACAAATAGCTATTCAGACTATCGCATAGGCTGCCTAAAACCTGGAAAA
TACAAGGTTGTCTTGGACTCAGATGATCCACCTTTTGGTGGCTTCGGGAGAATTGATCAT
AATGCCGAATATTTCACCTTTGTAAGTTAA