Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g009030.3.1
CDS Infomation	Histone deacetylase HDT1 (AHRD V3.3 *** HDT1_SOLCH)
Sequence	ATGGAGTTTTGGGGTGCTGAGGTGAAAAGTGGAGAGCCATTAACTGTACAGCCTGGAGAT GGGATGGTTTTGCATCTTTCACAGGCATCTCTAGGTGAGTTGAAGAAGGATAAATCAGAA AGTGCCTGCTTGTCAGTGAATATTGATGGCAAGAAACTTGTTCTTGGGACACTCAACTCA GAGAAGGTGCCTCAACAGCAATTTGACCTGGTTTTTGATAAAGACTTTGAATTATCTCAC AACTTGAAAAGTGGCAGCATTTATTTTTCGTTCGATGTAAAATTTTGTGTATTTGTTTCA TTGACCAAACTTCTGTGGTTCACGGAAGAGGATGACGAAGATGATTATGATGATTCTGAT GAGGATATCCCCCTCACTCTTGCCAACAGTGGTAAACCTGACCCTAAAGAGGCTGGGAAG TCTAACGCTGGAAAGGATTCTGCTTCAGGAAAGCAGAAGGTGAGGATTGTGGAGCCTACT AAAGATGATGAAGATGAGAGCTCTGATGATGATGGTTCTGACTTGGGAGAGGATGAAGAC GACTCTGATGAGAGTGAGGAGGAGACACCAAAGAAGGCTGAGCCTGCAAAAAAGAGGAAG GCAGATTCAGCTACAAAAACACCTGTCACTGATAAAAAGGCAAAATTGACAACACCTCAA AAAACTGATGGCAAAAAAGGTGGTGTCCATGTAGCAACACCGCACCCTTCTAAGCAGGCT AGTAAGACTCCAAAATCAGCTGGATCTCATCACTGCAAGCCGTGCAACAGGAGTTTTGGT TCTGAAGGTGCTCTCGAATCTCACTCGAAAGCTAAACACAGTGCTGGAAAGTAA

Peptide Sequence

PEP ID	Solyc09g009030.3.1
PEP Infomation	Histone deacetylase HDT1 (AHRD V3.3 *** HDT1_SOLCH)
Sequence	MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESACLSVNIDGKKLVLGTLNS EKVPQQQFDLVFDKDFELSHNLKSGSIYFSFDVKFCVFVSLTKLLWFTEEDDEDDYDDSD EDIPLTLANSGKPDPKEAGKSNAGKDSASGKQKVRIVEPTKDDEDESSDDDGSDLGEDED DSDESEEETPKKAEPAKKRKADSATKTPVTDKKAKLTTPQKTDGKKGGVHVATPHPSKQA SKTPKSAGSHHCKPCNRSFGSEGALESHSKAKHSAGK*

Transcript Sequence

Transcript ID	Solyc09g009030.3.1
Transcript Infomation	Histone deacetylase HDT1 (AHRD V3.3 *** HDT1_SOLCH)
Sequence	CTAATTAATTAAAAATAAGTTGGTTCTAGAATGATACGGTAGTCCGCGAAGTATAATATC AAAACCCAAACTCTATTTCTCCCGCTTATAAACAAGCAAACACATAGTACACCCTAGCAG TCTCTTTCTTCCTCCATTTCTCCTCTAAAACCCTAATTTCTCTCTAAAACCCTAAAAGCA GCTATGGAGTTTTGGGGTGCTGAGGTGAAAAGTGGAGAGCCATTAACTGTACAGCCTGGA GATGGGATGGTTTTGCATCTTTCACAGGCATCTCTAGGTGAGTTGAAGAAGGATAAATCA GAAAGTGCCTGCTTGTCAGTGAATATTGATGGCAAGAAACTTGTTCTTGGGACACTCAAC TCAGAGAAGGTGCCTCAACAGCAATTTGACCTGGTTTTTGATAAAGACTTTGAATTATCT CACAACTTGAAAAGTGGCAGCATTTATTTTTCGTTCGATGTAAAATTTTGTGTATTTGTT TCATTGACCAAACTTCTGTGGTTCACGGAAGAGGATGACGAAGATGATTATGATGATTCT GATGAGGATATCCCCCTCACTCTTGCCAACAGTGGTAAACCTGACCCTAAAGAGGCTGGG AAGTCTAACGCTGGAAAGGATTCTGCTTCAGGAAAGCAGAAGGTGAGGATTGTGGAGCCT ACTAAAGATGATGAAGATGAGAGCTCTGATGATGATGGTTCTGACTTGGGAGAGGATGAA GACGACTCTGATGAGAGTGAGGAGGAGACACCAAAGAAGGCTGAGCCTGCAAAAAAGAGG AAGGCAGATTCAGCTACAAAAACACCTGTCACTGATAAAAAGGCAAAATTGACAACACCT CAAAAAACTGATGGCAAAAAAGGTGGTGTCCATGTAGCAACACCGCACCCTTCTAAGCAG GCTAGTAAGACTCCAAAATCAGCTGGATCTCATCACTGCAAGCCGTGCAACAGGAGTTTT GGTTCTGAAGGTGCTCTCGAATCTCACTCGAAAGCTAAACACAGTGCTGGAAAGTAAATA GACATGGAGACATTTAGTCTTTGTTTGGTTGTTACCTATGATCAGAAGAGAGCTTTTTTA GTCGTTTTTTTCCCCGTTTCGATTTGGTTCATCTGATGTAAAGGAAAGATGAGTTACATC TATTATGATCTATCTCTAGGTCAATCATCTGTTTTGATGTTTAAGACTTGTTATGTTTTC AATGAGAGTTTTGGATTGAATCAGAGAATGTTATTGCCTGTTGGTATCTTGTTATTTGGG AAAAAAAAAACTAATGTTAACATTACAATCTCAATCTATCATTAAGTATTTACTACTTTG AATCATGATCTTATTTC