Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g008820.3.1
CDS Infomation

F-box protein PP2-A13 (AHRD V3.3 *** A0A072U2Z8_MEDTR)
Sequence

ATGGGCGCATCATTGTCCAGCCTAACGGAGAACGAATCGACGGCCAACGGTAGACCAGGT
CTCGGCGATATACCGGAAAATTGTGTAGCCTGTGTGTTCATGTACCTTACCCCACCGGAA
ATCTGTAATCTTGCTAGACTTAACCACGCCTTTCGTGGAGCTGCATCTTCTGACTCGGTT
TGGGATTCTAAGCTTCCGTCTAATTACCACCACCTGCTCGACGTTTTGCCTCAGAGAATA
TACGAAGGTTTTTCCAAAAAAGATATCTTTGCTTTTTTATCTCGTCCTGTTCCATTTGAT
GACGGCAATAAGGAAGTTTGGTTGGATAGAATTAGTGGAAGGATTTGCATGTCTATCTCC
ACGAAAGCAATGTTGATAACTAGTGGTGAAGACAGAAGACATTGGAACTGGTTTCCTACT
GAAGAGTCCAGGTTCCATGTAGTGGCGTATTGCCAGCAAGTATGGTGGTTTGAAGTAAGC
GGTTCAGTGAAGTTTCCATTTCCTCCAGATATATACACACTAACATTCAGGGTCCGCCTT
GGGAAGTTTTACAAGAGACTTGGTCGACGTGTTTGCAACTTTGAGCACACTCATGGATGG
GATTTAGGGCCAGTTCAATATGAACTCTTTACATCTGACGGGCAACATGCAGTGAGTGAG
TACTCCCTAGATGATAGCGATCAAGATGATACAAGTGCGAATTTAAAGCGTGGCGACTGG
ATAGAATACAAGGTGGGTGAATTTATAGTAAGTAGGTCCGACCCTGCTACTGAAGTTAGA
TTTTCAATGAAACAGATCGATTGCACACATTCAAAAGGTGGACTCTGTATAGATTCTGTA
TCGATTACGCCAAGTGATCTGAAAGCACGTAGAAGTAAAGGGGTGTCAAAGTATCAGTAA

Peptide Sequence

PEP ID

Solyc09g008820.3.1
PEP Infomation

F-box protein PP2-A13 (AHRD V3.3 *** A0A072U2Z8_MEDTR)
Sequence

MGASLSSLTENESTANGRPGLGDIPENCVACVFMYLTPPEICNLARLNHAFRGAASSDSV
WDSKLPSNYHHLLDVLPQRIYEGFSKKDIFAFLSRPVPFDDGNKEVWLDRISGRICMSIS
TKAMLITSGEDRRHWNWFPTEESRFHVVAYCQQVWWFEVSGSVKFPFPPDIYTLTFRVRL
GKFYKRLGRRVCNFEHTHGWDLGPVQYELFTSDGQHAVSEYSLDDSDQDDTSANLKRGDW
IEYKVGEFIVSRSDPATEVRFSMKQIDCTHSKGGLCIDSVSITPSDLKARRSKGVSKYQ*

Transcript Sequence

Transcript ID

Solyc09g008820.3.1
Transcript Infomation

F-box protein PP2-A13 (AHRD V3.3 *** A0A072U2Z8_MEDTR)
Sequence

CTTTTTCACTTCCCTATTAATATCTGCCCAAACACTCCATTTCTCCAGTCACCGGCGCCG
GCGACGACATTTATGAATTGACCAAATTACCCTACTTCTCTTCTACAACAATACCAGATA
ATCGGAAGGACTTGAAGGTAATTTTCGCATGGGCGCATCATTGTCCAGCCTAACGGAGAA
CGAATCGACGGCCAACGGTAGACCAGGTCTCGGCGATATACCGGAAAATTGTGTAGCCTG
TGTGTTCATGTACCTTACCCCACCGGAAATCTGTAATCTTGCTAGACTTAACCACGCCTT
TCGTGGAGCTGCATCTTCTGACTCGGTTTGGGATTCTAAGCTTCCGTCTAATTACCACCA
CCTGCTCGACGTTTTGCCTCAGAGAATATACGAAGGTTTTTCCAAAAAAGATATCTTTGC
TTTTTTATCTCGTCCTGTTCCATTTGATGACGGCAATAAGGAAGTTTGGTTGGATAGAAT
TAGTGGAAGGATTTGCATGTCTATCTCCACGAAAGCAATGTTGATAACTAGTGGTGAAGA
CAGAAGACATTGGAACTGGTTTCCTACTGAAGAGTCCAGGTTCCATGTAGTGGCGTATTG
CCAGCAAGTATGGTGGTTTGAAGTAAGCGGTTCAGTGAAGTTTCCATTTCCTCCAGATAT
ATACACACTAACATTCAGGGTCCGCCTTGGGAAGTTTTACAAGAGACTTGGTCGACGTGT
TTGCAACTTTGAGCACACTCATGGATGGGATTTAGGGCCAGTTCAATATGAACTCTTTAC
ATCTGACGGGCAACATGCAGTGAGTGAGTACTCCCTAGATGATAGCGATCAAGATGATAC
AAGTGCGAATTTAAAGCGTGGCGACTGGATAGAATACAAGGTGGGTGAATTTATAGTAAG
TAGGTCCGACCCTGCTACTGAAGTTAGATTTTCAATGAAACAGATCGATTGCACACATTC
AAAAGGTGGACTCTGTATAGATTCTGTATCGATTACGCCAAGTGATCTGAAAGCACGTAG
AAGTAAAGGGGTGTCAAAGTATCAGTAACTCATCTGTTCAATTTTTTTTCCACTGCTC