Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g008660.3.1
CDS Infomation	LOW QUALITY:Protein CHUP1, chloroplastic (AHRD V3.3 *** A0A0B2P3P6_GLYSO)
Sequence	CATACACCAAACAATCCATTTATAGATCATCTTGATATTTCAATTCAACTCTCAAAAAAT TATTTCATAGACATGGAAAATAATAGCTCAAAAGTAGAGATGATGAAGCCAGTATTCCTC AAGGCTGGAATACCAATAGCCCTCACTTTAGCTGGTTACATAATTGCCAAAATAACAAGT AGAAAAAGCTCAAATTTTCAAATTTCACCAATTCAAGAAAATCCTCATGAGGTGGTCTCA AGAAAAGATGAAAATGATCATCAAAATCTTGAAATTTCAGAATCTTTATCTTGTATAAAA TCTAATGATGATGATGATGATCATTGTTCTACAAGTACCCTTTACAATGATTCATCAAAA AGTTTTGATCTTTATCAAAATAAATGCAAGTTTCAAGAAAATCATCAAGACTTCTCAAGA AATGAAGATGGTCATCAAAATCTTGAAAATTCAGAAACTTTATCTTGTGTAGAAGCTAAT GATAGTAATCATTGTTGTAAAAACACCCTTTACAAAGATTCATCAGAAAGTTTCAATCTT TATCAAGAAAAATGCAAAATTCAAGAAAATCCTCATGAGGTTTCAAGAAATGAAGATGGT CATCAAAATCTTGAAAATTCAGATACTTTATCTTGTATTGAAGCAAATGATGATGATGAT CATTGTTCTACACACACCCTTTACAAAGATTCATTAGAAAGTTTCAATCTTTATCAAGAA AAACACAAAATTCAAGAAGATATTAAGTCCAAATTCCAACAATATACTCACTTGAAAGAG AAAGAAATTGCACTTATGGATATGCAATACAAGTTGTTATTAGAGATCAATAAAGTTGAG TTGTTTAGTAAGGAAATTACACTAATGGAAGCAGAGTGCCAAAGATTTCAAAATATGGTA ATTGAATATTTGAGAATTATGGAACTTCTTGATTTGTCAAATTCAGAAAATAGTTTGCTT CAAAATAGAGTTAAGAAGCTTATAAAGAAAACCAAAGAACATTCAAGAGTTATGAAGGAA CAAAAATCTCAACTTGAAGCTAAGGAAAAAGAAATTTCAACAAATCAAGAAGGGCTAGAA ATGAAAGATCATGTCATCAAGGAAATGGAATTGGAAATTCAGCAGCTGAAAATGGAGCTG GAATTGGCAAAGACTTCAAACCAATCAAAGAATGATGTAGAAGTTGTGACAATAGAAGAT TACAAAGAATTGGTAAATGAACTTGAGCAATTGCAAAAGGACAAAGCTAGTGAAGACAAA GAGCTAATATACTTAAGATGGTGCAATGCATGTCTAAGACATGAATTAATGAGAAGAAAT CAAGAACAAATGGAACAAGGGAAAAATCAAGAATTGAATTTGGGACATGAAAATGTTGAA CAATTTGTACCAAAAGTAGATGATTTAATAATTGGGAGGAGTTCATCAGTTGGTCATAAT GAATCTTGTTTAAATTCACCTATTAATGATCATTCAAAAAGGAGAAAATTAATACAAAAG TTCAAGAAATGGGTAGAGGGAAGTGATAAAATGAAAAATGAAACAAATTGCTTTAAGAGG CATTGTGTTTCTGATCATAATGAGGATTTGATTCATCCTGCTAGAAAATCATGTTCTAGT GCCTAA

Peptide Sequence

PEP ID	Solyc09g008660.3.1
PEP Infomation	LOW QUALITY:Protein CHUP1, chloroplastic (AHRD V3.3 *** A0A0B2P3P6_GLYSO)
Sequence	HTPNNPFIDHLDISIQLSKNYFIDMENNSSKVEMMKPVFLKAGIPIALTLAGYIIAKITS RKSSNFQISPIQENPHEVVSRKDENDHQNLEISESLSCIKSNDDDDDHCSTSTLYNDSSK SFDLYQNKCKFQENHQDFSRNEDGHQNLENSETLSCVEANDSNHCCKNTLYKDSSESFNL YQEKCKIQENPHEVSRNEDGHQNLENSDTLSCIEANDDDDHCSTHTLYKDSLESFNLYQE KHKIQEDIKSKFQQYTHLKEKEIALMDMQYKLLLEINKVELFSKEITLMEAECQRFQNMV IEYLRIMELLDLSNSENSLLQNRVKKLIKKTKEHSRVMKEQKSQLEAKEKEISTNQEGLE MKDHVIKEMELEIQQLKMELELAKTSNQSKNDVEVVTIEDYKELVNELEQLQKDKASEDK ELIYLRWCNACLRHELMRRNQEQMEQGKNQELNLGHENVEQFVPKVDDLIIGRSSSVGHN ESCLNSPINDHSKRRKLIQKFKKWVEGSDKMKNETNCFKRHCVSDHNEDLIHPARKSCSS A*

Transcript Sequence

Transcript ID	Solyc09g008660.3.1
Transcript Infomation	LOW QUALITY:Protein CHUP1, chloroplastic (AHRD V3.3 *** A0A0B2P3P6_GLYSO)
Sequence	CATACACCAAACAATCCATTTATAGATCATCTTGATATTTCAATTCAACTCTCAAAAAAT TATTTCATAGACATGGAAAATAATAGCTCAAAAGTAGAGATGATGAAGCCAGTATTCCTC AAGGCTGGAATACCAATAGCCCTCACTTTAGCTGGTTACATAATTGCCAAAATAACAAGT AGAAAAAGCTCAAATTTTCAAATTTCACCAATTCAAGAAAATCCTCATGAGGTGGTCTCA AGAAAAGATGAAAATGATCATCAAAATCTTGAAATTTCAGAATCTTTATCTTGTATAAAA TCTAATGATGATGATGATGATCATTGTTCTACAAGTACCCTTTACAATGATTCATCAAAA AGTTTTGATCTTTATCAAAATAAATGCAAGTTTCAAGAAAATCATCAAGACTTCTCAAGA AATGAAGATGGTCATCAAAATCTTGAAAATTCAGAAACTTTATCTTGTGTAGAAGCTAAT GATAGTAATCATTGTTGTAAAAACACCCTTTACAAAGATTCATCAGAAAGTTTCAATCTT TATCAAGAAAAATGCAAAATTCAAGAAAATCCTCATGAGGTTTCAAGAAATGAAGATGGT CATCAAAATCTTGAAAATTCAGATACTTTATCTTGTATTGAAGCAAATGATGATGATGAT CATTGTTCTACACACACCCTTTACAAAGATTCATTAGAAAGTTTCAATCTTTATCAAGAA AAACACAAAATTCAAGAAGATATTAAGTCCAAATTCCAACAATATACTCACTTGAAAGAG AAAGAAATTGCACTTATGGATATGCAATACAAGTTGTTATTAGAGATCAATAAAGTTGAG TTGTTTAGTAAGGAAATTACACTAATGGAAGCAGAGTGCCAAAGATTTCAAAATATGGTA ATTGAATATTTGAGAATTATGGAACTTCTTGATTTGTCAAATTCAGAAAATAGTTTGCTT CAAAATAGAGTTAAGAAGCTTATAAAGAAAACCAAAGAACATTCAAGAGTTATGAAGGAA CAAAAATCTCAACTTGAAGCTAAGGAAAAAGAAATTTCAACAAATCAAGAAGGGCTAGAA ATGAAAGATCATGTCATCAAGGAAATGGAATTGGAAATTCAGCAGCTGAAAATGGAGCTG GAATTGGCAAAGACTTCAAACCAATCAAAGAATGATGTAGAAGTTGTGACAATAGAAGAT TACAAAGAATTGGTAAATGAACTTGAGCAATTGCAAAAGGACAAAGCTAGTGAAGACAAA GAGCTAATATACTTAAGATGGTGCAATGCATGTCTAAGACATGAATTAATGAGAAGAAAT CAAGAACAAATGGAACAAGGGAAAAATCAAGAATTGAATTTGGGACATGAAAATGTTGAA CAATTTGTACCAAAAGTAGATGATTTAATAATTGGGAGGAGTTCATCAGTTGGTCATAAT GAATCTTGTTTAAATTCACCTATTAATGATCATTCAAAAAGGAGAAAATTAATACAAAAG TTCAAGAAATGGGTAGAGGGAAGTGATAAAATGAAAAATGAAACAAATTGCTTTAAGAGG CATTGTGTTTCTGATCATAATGAGGATTTGATTCATCCTGCTAGAAAATCATGTTCTAGT GCCTAATTATGTGACTATATATTAGAAAATAATTTCTTCATATTTGTTTGCCTACATTAT GGAGATTATATTAACATATATGTAGCTCCCAATTTATGAAATGAGAAAGAAACAATTGAT CTTATGAAGTAC