Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g008205.1.1
CDS Infomation

Cellulose synthase-like protein (AHRD V3.3 *** L0ASI8_POPTO)
Sequence

ATGAGAAATCTCGTTTTCCAAGATCCTGGGATCAGAGTAAGCACCAATTCTACTCAAAGT
CTAAATCATGCTTGGGAGCGAATACGAGTTCCAGTTGTAGTGCCTGCCCTACACCTTGCA
ATGTATATATGCATAGCCATGTCCGTCATGCTATTTCTTGAGCGTATTTACATGGCAATA
GTGATAGCAGGGGTCAAGTGCTTTGGAAAGAAAAGATATACCAAGTATAAGCTCGAGTCC
GTAAAAGAAGACCTAGAGAAAAACAAAAACTACCCAATGGTGTTGGTCCAAATTCCTATG
TTCAATGAAAAGGAGGTTTACAAGCTCTCAATTGGTGCTGTATGTGGCTTGTCATGGCCA
TCAGATAGGCTTGTAGTGCAGGTTCTTGATGACTCTACCAACGAAGTTTTACGGACATTA
GTGGACTTGGAATGTCGAAAGTGGATAGAGAGAGGGATAAATGTGAAATACGAAACAAGA
AACAACAGGAATGGCTACAAAGCTGGTGCTCTCAAGGAGGGTCTAAAGAAGCAGTATGTT
GATGACTGTGAGTATGTTGTGATCTTTGATGCAGACTTTCAGCCTGAAGAAGACTTTCTT
TGGAGAACCATACCATATCTTATCGACAACCCAGAACTGGCTCTGGTTCAAGCCAGATGG
AAATTTGTCAATGCAGATGAATGTCTGATGACTCGACTTCAAGAGATGTCACTGGACTAT
CATTTCAGTGTTGAGCAAGAAGTTGGCTCATCCACATGTTCATTTTTTGGTTTCAATGGG
ACTGCTGGCGTGTGGAGAATTCGAGCAGTGAATGATGCTGGCGGATGGAAAGACAGGACC
ACAGTAGAGGATATGGATCTTGCAGTACGGGCGAGCCTGAAGGGTTGGAAATTTTTGTTT
GTGGGCGACTTAGCTGTCAAGAACGAACTCCCAAGTACCTTCAAGGCTTACAGATTTCAG
CAGCACCGCTGGTCATGCGGCCCAGCTAACCTCTTTCGCAAGATGATTAAAGAAATCATC
CTTTGTGAGCGTGTATCAGTATGGAAGAAGTTTCATCTCATCTATGGTTTCTTCTTTGTG
AGGAAGATTATTGCACACTGGGTTACGTTTTTCTTTTACTGTATCGTCATTCCAGCAACT
ATCTTGGTGCCTGAAGTCCATCTTACAAAGCCTCTAGCTATATATCTTCCAGCAACTATT
ACCATTCTTAATGCCGCTTGCACACCAAGATCTTTCCATCTTCTTGTATTCTGGATCCTA
TTTGAGAATGTCATGTCTCTCCATCGATCCAAGGCAGCAATAATAGGACTCTTAGAAGCC
AGCCGAGTAAATGAATGGGTTGTAACTGAGAAGCTGGGGAACACGATGAAGCAAAAGTAC
AGTGCCAAAGCATCAAAGAAACCAAGATCAAGGATAGGTGAAAGGATTCACGTCTTAGAG
CTGCTAATGGGAATGTATATGCTACACTGTGCTATATACAACATGCTATTTGGAAATGAC
CACTTTTTCATCTACCTGTTCCTCCAAGCAGGAGCGTTCTTCATTGTTGGAATTGGCTAT
GTTGGAACATTCGTCCCCAATTAG

Peptide Sequence

PEP ID

Solyc09g008205.1.1
PEP Infomation

Cellulose synthase-like protein (AHRD V3.3 *** L0ASI8_POPTO)
Sequence

MRNLVFQDPGIRVSTNSTQSLNHAWERIRVPVVVPALHLAMYICIAMSVMLFLERIYMAI
VIAGVKCFGKKRYTKYKLESVKEDLEKNKNYPMVLVQIPMFNEKEVYKLSIGAVCGLSWP
SDRLVVQVLDDSTNEVLRTLVDLECRKWIERGINVKYETRNNRNGYKAGALKEGLKKQYV
DDCEYVVIFDADFQPEEDFLWRTIPYLIDNPELALVQARWKFVNADECLMTRLQEMSLDY
HFSVEQEVGSSTCSFFGFNGTAGVWRIRAVNDAGGWKDRTTVEDMDLAVRASLKGWKFLF
VGDLAVKNELPSTFKAYRFQQHRWSCGPANLFRKMIKEIILCERVSVWKKFHLIYGFFFV
RKIIAHWVTFFFYCIVIPATILVPEVHLTKPLAIYLPATITILNAACTPRSFHLLVFWIL
FENVMSLHRSKAAIIGLLEASRVNEWVVTEKLGNTMKQKYSAKASKKPRSRIGERIHVLE
LLMGMYMLHCAIYNMLFGNDHFFIYLFLQAGAFFIVGIGYVGTFVPN*

Transcript Sequence

Transcript ID

Solyc09g008205.1.1
Transcript Infomation

Cellulose synthase-like protein (AHRD V3.3 *** L0ASI8_POPTO)
Sequence

AGCATAACTTTAGAAATTTATTGCAATCAACAAGTGGCACGTATTTAAACCAAACTTCCT
ACTTTCTAAAGAATTACCGACAGCCATGATATAATTAGGGAAGTCACCCTTCACAAGGTA
ATTTATAAACATTTAAATAAAGCCAACCACTTACTAACATATCCATCGTGACTTGGGACT
GCAAGTGTCCCACACAAGAATCGACAATTTAGATGACATTGCGAGAGTTGATGACGGTGG
TAACGTTGGATGTGCTCAAAACGTGTTGTGTTCTATATTCACATGATTCCAAACTTGTGT
GGTGTCTTTGAGGCTAGATATATGCATCACTTCATGGTTCTACATCCAGAAAAAACAGAG
TTAGGCCAGCTGTAAACTTCAAAGCAAACTTTGCAATTTTCATTTATTTGATAGTATGAT
TTCAAAAGCAATCAGTGATGTCGGTGACAGGATAAAACGACGTAGTCCTACTAAGATAAT
TATTTTGTTTCTGATTCAAGTCAGAATTACCACTAATACTCTCAAAAAGAAAGCATGAAA
TCAGAGTAACTTAGGAGCTAAAAAAAGGATAAAGGCAATAGTGAGAGAAGATAACAAGTT
ATACTAAAGACTCGAGGAGTTAAGAAGCATTTTGGTGAAATTCAGATCCTCCAACAGCAT
TGTCGGAGGGAAAAGCCAAACATCCAGCTAGCACAATGATACGTTGCAGCACCTTCATTG
CATGTAGACCGTGTGTCTCTCACATGAAAGAACTTTATTTAAATGGATTACTCAATCTAC
AATACCACTCCAGCTCATCTCCATTTACTATCGTCACCTTCACCACAATCACACTGCATC
TTTATTTAAAGCAGCAAAACCTTCATCCTAAATTTCACCACAATTTCCCTCCATCTCTAT
GTACTTGCAAGGGCAAGCTCGTTCCTTTCAACCTAAAGTGCTCTGCTCCCTAACTAAACT
CTGAATTCAGGTCGAGACAAACCATGAGAAATCTCGTTTTCCAAGATCCTGGGATCAGAG
TAAGCACCAATTCTACTCAAAGTCTAAATCATGCTTGGGAGCGAATACGAGTTCCAGTTG
TAGTGCCTGCCCTACACCTTGCAATGTATATATGCATAGCCATGTCCGTCATGCTATTTC
TTGAGCGTATTTACATGGCAATAGTGATAGCAGGGGTCAAGTGCTTTGGAAAGAAAAGAT
ATACCAAGTATAAGCTCGAGTCCGTAAAAGAAGACCTAGAGAAAAACAAAAACTACCCAA
TGGTGTTGGTCCAAATTCCTATGTTCAATGAAAAGGAGGTTTACAAGCTCTCAATTGGTG
CTGTATGTGGCTTGTCATGGCCATCAGATAGGCTTGTAGTGCAGGTTCTTGATGACTCTA
CCAACGAAGTTTTACGGACATTAGTGGACTTGGAATGTCGAAAGTGGATAGAGAGAGGGA
TAAATGTGAAATACGAAACAAGAAACAACAGGAATGGCTACAAAGCTGGTGCTCTCAAGG
AGGGTCTAAAGAAGCAGTATGTTGATGACTGTGAGTATGTTGTGATCTTTGATGCAGACT
TTCAGCCTGAAGAAGACTTTCTTTGGAGAACCATACCATATCTTATCGACAACCCAGAAC
TGGCTCTGGTTCAAGCCAGATGGAAATTTGTCAATGCAGATGAATGTCTGATGACTCGAC
TTCAAGAGATGTCACTGGACTATCATTTCAGTGTTGAGCAAGAAGTTGGCTCATCCACAT
GTTCATTTTTTGGTTTCAATGGGACTGCTGGCGTGTGGAGAATTCGAGCAGTGAATGATG
CTGGCGGATGGAAAGACAGGACCACAGTAGAGGATATGGATCTTGCAGTACGGGCGAGCC
TGAAGGGTTGGAAATTTTTGTTTGTGGGCGACTTAGCTGTCAAGAACGAACTCCCAAGTA
CCTTCAAGGCTTACAGATTTCAGCAGCACCGCTGGTCATGCGGCCCAGCTAACCTCTTTC
GCAAGATGATTAAAGAAATCATCCTTTGTGAGCGTGTATCAGTATGGAAGAAGTTTCATC
TCATCTATGGTTTCTTCTTTGTGAGGAAGATTATTGCACACTGGGTTACGTTTTTCTTTT
ACTGTATCGTCATTCCAGCAACTATCTTGGTGCCTGAAGTCCATCTTACAAAGCCTCTAG
CTATATATCTTCCAGCAACTATTACCATTCTTAATGCCGCTTGCACACCAAGATCTTTCC
ATCTTCTTGTATTCTGGATCCTATTTGAGAATGTCATGTCTCTCCATCGATCCAAGGCAG
CAATAATAGGACTCTTAGAAGCCAGCCGAGTAAATGAATGGGTTGTAACTGAGAAGCTGG
GGAACACGATGAAGCAAAAGTACAGTGCCAAAGCATCAAAGAAACCAAGATCAAGGATAG
GTGAAAGGATTCACGTCTTAGAGCTGCTAATGGGAATGTATATGCTACACTGTGCTATAT
ACAACATGCTATTTGGAAATGACCACTTTTTCATCTACCTGTTCCTCCAAGCAGGAGCGT
TCTTCATTGTTGGAATTGGCTATGTTGGAACATTCGTCCCCAATTAGAAAATACGGTGAA
CATAGGATGCCACTGGCATGCAGGACACAGTGAGAACCATGCCCAACTAGTATACTAGTA
GTATGCAAGTGCTAAATTGTTTAAAAGTTAGGCCCTACAAGAGCTTAAAGGTTTCAATGT
AATAATGTGTTTCATTATTTTTATATATTTCCAGAATTTACAGATGTTCATTTGGCTGCC
CAAATAACTTTTGCTACTCTTTGTCGTGTCATCAGATATCCATTGCATAGTATTGTATGT
AGTAAATTGTGAAAAAGATAAGCATTAGTATTGTGTTCTAATTTTATCTTCTTTTCTGCA
AGAAAAAGGCAAATTCATGGAACTTAATGATTTAGCTAAGCATATTTTACTTCGTGACTC
AACCCCTCCTAAAGATTTTAATGAACCTATGGA