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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g007560.3.1
CDS Infomation

50S ribosomal protein L5 (AHRD V3.3 *** B5TV71_CAMSI)
Sequence

ATGGCGGCTTCTCCTCTTCTTCTACACTCCACGGCCTCCTCTTTCTACAATGCTGAGTTT
CCGGCGTACTCCGTTCGATTGCCGGTCGGAAATACCAAGGTCCGGTCGTCCAATAAATTG
ACGGTGAAAGCTTCAGCAACAGTACTAGTGGATAAAAGTGAAGCTGAAAAAGTTAATCGT
CTGAAAACAAATTACCTCGAAAAGATTGTGCCGTTGTTGAAGGAAGAATTCAGTTACACC
AATATTCTTCAGGTTCCGAAGGTCGAAAAGATTGTGGTAAATTGTGGTATAGGAGATGCT
GCACAAAATTCCAAGGGTTTGGATGCAGCAATGAATGATTTGGCCTTAATTACAGGGCAA
AGGCCTGTGAAGACTAGGGCTAAGAATGCTATTGCTACTTTCAAAATTAGAGAAGGTCAA
CCGCTTGGAATTGCTGTTACACTTCGAGGGAATGTAATGTATTCGTTCCTTGACCGGTTA
ATTAATTTGGGGCTTCCTCGAACGAGGGACTTTCAAGGCGTAAACCCCAATAGCTTTGAT
GGTCATGGAAATTATAGCATTGGCTTTCGTGAACAGAGTGTCTTCCCAGAGTTAAGTTAT
GATGCTCTTGGTAAGCCAAGAGGGATGGATGTTTGCATAACAACAACAGCTGAGACAGAT
AAAGAGGCACACAGATTGTTGGCTCTCATGGGTATGCCATTTAGAGAAGGTTCTGGTGGA
CAGACAACTTTTACGAAAAAGAAAAAGCTTAGAGCTCACCATTTTGACTCGAAGGCGAAG
CAAAGGTCTAGGAGATGA

Peptide Sequence

PEP ID

Solyc09g007560.3.1
PEP Infomation

50S ribosomal protein L5 (AHRD V3.3 *** B5TV71_CAMSI)
Sequence

MAASPLLLHSTASSFYNAEFPAYSVRLPVGNTKVRSSNKLTVKASATVLVDKSEAEKVNR
LKTNYLEKIVPLLKEEFSYTNILQVPKVEKIVVNCGIGDAAQNSKGLDAAMNDLALITGQ
RPVKTRAKNAIATFKIREGQPLGIAVTLRGNVMYSFLDRLINLGLPRTRDFQGVNPNSFD
GHGNYSIGFREQSVFPELSYDALGKPRGMDVCITTTAETDKEAHRLLALMGMPFREGSGG
QTTFTKKKKLRAHHFDSKAKQRSRR*

Transcript Sequence

Transcript ID

Solyc09g007560.3.1
Transcript Infomation

50S ribosomal protein L5 (AHRD V3.3 *** B5TV71_CAMSI)
Sequence

CACAAAGAACATCTTATCCAATTACCCTTTTATTTTTCACACACAGAGAGAAAAAGCTCA
GAGAAAATGGCGGCTTCTCCTCTTCTTCTACACTCCACGGCCTCCTCTTTCTACAATGCT
GAGTTTCCGGCGTACTCCGTTCGATTGCCGGTCGGAAATACCAAGGTCCGGTCGTCCAAT
AAATTGACGGTGAAAGCTTCAGCAACAGTACTAGTGGATAAAAGTGAAGCTGAAAAAGTT
AATCGTCTGAAAACAAATTACCTCGAAAAGATTGTGCCGTTGTTGAAGGAAGAATTCAGT
TACACCAATATTCTTCAGGTTCCGAAGGTCGAAAAGATTGTGGTAAATTGTGGTATAGGA
GATGCTGCACAAAATTCCAAGGGTTTGGATGCAGCAATGAATGATTTGGCCTTAATTACA
GGGCAAAGGCCTGTGAAGACTAGGGCTAAGAATGCTATTGCTACTTTCAAAATTAGAGAA
GGTCAACCGCTTGGAATTGCTGTTACACTTCGAGGGAATGTAATGTATTCGTTCCTTGAC
CGGTTAATTAATTTGGGGCTTCCTCGAACGAGGGACTTTCAAGGCGTAAACCCCAATAGC
TTTGATGGTCATGGAAATTATAGCATTGGCTTTCGTGAACAGAGTGTCTTCCCAGAGTTA
AGTTATGATGCTCTTGGTAAGCCAAGAGGGATGGATGTTTGCATAACAACAACAGCTGAG
ACAGATAAAGAGGCACACAGATTGTTGGCTCTCATGGGTATGCCATTTAGAGAAGGTTCT
GGTGGACAGACAACTTTTACGAAAAAGAAAAAGCTTAGAGCTCACCATTTTGACTCGAAG
GCGAAGCAAAGGTCTAGGAGATGA