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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g007250.3.1
CDS Infomation

60S ribosomal protein L4 (AHRD V3.3 *** RL4_PRUAR)
Sequence

ATGGCCACCGCTGCCGCCATCCCAACCACCACCGTGCAAAGCCTGGAAAATGATATGGCC
ACTGACAGCGCCGCCGTTCCCCTTCCCGCCGTCATGAAGGCGCCGATCCGTCCAGATGTA
GTCACCTATGTCCACTCCAACATCTCCAAAAACGCTCGGCAACCGTATGCAGTGTCGAGG
AAAGCTGGTCATCAGACCTCTGCTGAGTCATGGGGTACCGGACGTGCTGTGTCACGTATC
CCTCGTGTTCCTGGTGGTGGTACTCACCGTGCTGGACAGGGAGCTTTCGGTAACATGTGT
CGTGGTGGACGGATGTTCGCTCCGACTCAGACCTGGCGCCGATGGCATAGGAAGATCCCT
GTTAACCAGAAAAGGTATGCTGTTGCTTCAGCTATTGCTGCATCTTCCGTTCCTTCATTG
GTTCTCGCTCGTGGTCACCGTATTGAATCGGTCCCTGAGTTACCTCTCGTTGTTTCTGAT
TCAATTGAGGGTATTGAGAAGACTAGCGTTGCTATCAAAGCTTTGAAGCAAATTGGTGCT
TACCCAGATGCTGAGAAAGCTAAGGATAGCCATGCTATTCGTCCTGGAAAGGGTAAAATG
CGTAACCGTAGGTACATTTCTCGTAAAGGTCCATTGATTGTGTATGGAACTGAAGGAGCT
AAGCTTGTGAAGGCATTCAGGAACATTCCTGGTGTTGAAATCTGCCATGTTGATCGTTTG
AATCTGCTCAAGCTTGCTCCAGGTGGTCACCTTGGTAGGTTTATTATCTGGACCAAATGT
GCTTACGAGAAATTAGATGCCATTTATGGTACATTCGATAAGCCATCACTGGAGAAGAAG
GGATATTTGTTGCCAAGGCCAAAGATGGTTAATGCTGATCTTGCCAGGATTATCAATTCT
GATGAGGTGCAGTCTGTTGTTAGACCAATCAAGAAGGATGTTAACAAGAGGGCAACTTTG
AAGAAGAATCCATTGAAGAACTTGAACGTTTTGCTGAAGCTCAATCCTTATGCAAAGACT
GCCAGGAGGATGTCCCTTTTGGCCGAGGCACAGCGTGTCAAGGCCAAGAAGGAGAAGCTC
GACAAGAAGAGACATCAAATTACAAAGGAGGAGGCATCAGCTATCAAGGGTGCAAGTCAT
TCATGGTACAAGACTATGATCTCAGATTCCGATTATGCAGAGTTCGACAACTTCACAAAG
TGGCTCGGAGTTTCTCAGTAA

Peptide Sequence

PEP ID

Solyc09g007250.3.1
PEP Infomation

60S ribosomal protein L4 (AHRD V3.3 *** RL4_PRUAR)
Sequence

MATAAAIPTTTVQSLENDMATDSAAVPLPAVMKAPIRPDVVTYVHSNISKNARQPYAVSR
KAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTQTWRRWHRKIP
VNQKRYAVASAIAASSVPSLVLARGHRIESVPELPLVVSDSIEGIEKTSVAIKALKQIGA
YPDAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKLVKAFRNIPGVEICHVDRL
NLLKLAPGGHLGRFIIWTKCAYEKLDAIYGTFDKPSLEKKGYLLPRPKMVNADLARIINS
DEVQSVVRPIKKDVNKRATLKKNPLKNLNVLLKLNPYAKTARRMSLLAEAQRVKAKKEKL
DKKRHQITKEEASAIKGASHSWYKTMISDSDYAEFDNFTKWLGVSQ*

Transcript Sequence

Transcript ID

Solyc09g007250.3.1
Transcript Infomation

60S ribosomal protein L4 (AHRD V3.3 *** RL4_PRUAR)
Sequence

TCTCTTTAAGGTTTCAATTCTACCGAAAAACCCTAGCAGCCCCCCCCCCCCTACCCCTGC
AATGGCCACCGCTGCCGCCATCCCAACCACCACCGTGCAAAGCCTGGAAAATGATATGGC
CACTGACAGCGCCGCCGTTCCCCTTCCCGCCGTCATGAAGGCGCCGATCCGTCCAGATGT
AGTCACCTATGTCCACTCCAACATCTCCAAAAACGCTCGGCAACCGTATGCAGTGTCGAG
GAAAGCTGGTCATCAGACCTCTGCTGAGTCATGGGGTACCGGACGTGCTGTGTCACGTAT
CCCTCGTGTTCCTGGTGGTGGTACTCACCGTGCTGGACAGGGAGCTTTCGGTAACATGTG
TCGTGGTGGACGGATGTTCGCTCCGACTCAGACCTGGCGCCGATGGCATAGGAAGATCCC
TGTTAACCAGAAAAGGTATGCTGTTGCTTCAGCTATTGCTGCATCTTCCGTTCCTTCATT
GGTTCTCGCTCGTGGTCACCGTATTGAATCGGTCCCTGAGTTACCTCTCGTTGTTTCTGA
TTCAATTGAGGGTATTGAGAAGACTAGCGTTGCTATCAAAGCTTTGAAGCAAATTGGTGC
TTACCCAGATGCTGAGAAAGCTAAGGATAGCCATGCTATTCGTCCTGGAAAGGGTAAAAT
GCGTAACCGTAGGTACATTTCTCGTAAAGGTCCATTGATTGTGTATGGAACTGAAGGAGC
TAAGCTTGTGAAGGCATTCAGGAACATTCCTGGTGTTGAAATCTGCCATGTTGATCGTTT
GAATCTGCTCAAGCTTGCTCCAGGTGGTCACCTTGGTAGGTTTATTATCTGGACCAAATG
TGCTTACGAGAAATTAGATGCCATTTATGGTACATTCGATAAGCCATCACTGGAGAAGAA
GGGATATTTGTTGCCAAGGCCAAAGATGGTTAATGCTGATCTTGCCAGGATTATCAATTC
TGATGAGGTGCAGTCTGTTGTTAGACCAATCAAGAAGGATGTTAACAAGAGGGCAACTTT
GAAGAAGAATCCATTGAAGAACTTGAACGTTTTGCTGAAGCTCAATCCTTATGCAAAGAC
TGCCAGGAGGATGTCCCTTTTGGCCGAGGCACAGCGTGTCAAGGCCAAGAAGGAGAAGCT
CGACAAGAAGAGACATCAAATTACAAAGGAGGAGGCATCAGCTATCAAGGGTGCAAGTCA
TTCATGGTACAAGACTATGATCTCAGATTCCGATTATGCAGAGTTCGACAACTTCACAAA
GTGGCTCGGAGTTTCTCAGTAAAGGAACTTTTCTTTTGTGAACTCATGTTAGAAAGTTTT
TTGTTTAGTCTGCTGTTTTGTTCCCAAGACATGAAAGATACTGAGTGGGAGGAAAACTAC
GGCCTCGTTGCCTGGCTTTTCCTTGCCTACATTTTGAGATTTCATTTTAGCGTCGAGTAT
TACTTCATATGGTATGGTATTAAGGATTTTGATGGAATAGTTTGTTTTTGATGGTTTGTT
TTCTAATATTGCATTGTTTGATAGTGCTCAAGAAAACATAGAATGATGATGTTGTTCTGA
TACATATTGGAGTCCAAAAGGGCCTTATTAGGCTTGGCCCTAACATCAGGACCATAGATC
GAGCCCAGTGAGCTATTTCGTTTTCTTC