Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g005760.3.1
CDS Infomation	U3 small nucleolar RNA-associated protein, putative (AHRD V3.3 *** A0A061DSN9_THECC)
Sequence	ATGGCGGGGACGAAGAGAAAAAGAAGAGAAGCAAATAGGCAAAACAAAGGAAGAGAATTT AAGAAGAAAAATCAAAGTTCAAGTGGAGGAAAAGATGGTAGAAGAAAAAGGTCCGGTCCT CGTTTGCCTAATGCTATGTTAAAGGAGCTTCAATTACCGAAACGGTACGCAGATTCCGAT GAAGAAATTGGCTCTGATGATGCTCTTAATGACTTGTATGAGTATGAAGAAGGGGTAGCT GAAGAGGAGTCAAGGAAGAATAGACGCTTTGACCCTGTTGAAAATTATCAATATGAGCTT CCTGAGGAGTTTGAGGATGAAGATGTACCTTCGGATGAAGAAGATGGTGGGGATGATGAG GGTGGTCGGAGAGGAGATGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGATGATGGAAGG CATTCACGATTGTTGCAAGAAATTACTGGACTTCCAACTGATGCTTTTGATGGCAAGAAG AAGAAAAATGACGTTATCATATCTGAGGCATATTCGGAGTCCGAGTATAATCCCAGTCGT GATATTTTGGATGGGGATGGCCGGATTAGCATCCAGGACCTTCTGGACCCCCTCCATGGG AAGTCTGACCATAGCAAACTTAGAAAGAGCATGAGTCGGATGGAGAAGAAGTCCATGCCT ATTCATGCACCTCTTCCGAAACCGGATCAAGAAAGATTGGAAAGAGATGCTGCTTATGGT TTTATCCAGAAGGATGTTACAAAATGGGAACCTCATGTCAAAAAAAACAGAGAGGCACCG ACTATATATTTTGGCAAAGATAAGAACGTGGGATATTCTACGGTAGGAGAAATCGCTGCT GAATTTGAACCAAGAAGTGATTTTGAGAAAAAAATTGCTTCTCTTTTTGATGACCATGAG GTCGTTGAAGCTCATAGAAAAGATGGTGCAAGACTTCTTGAACTTAATAAGATATCCGTA GAAGATGTGAGGGAGCGCCAAGACCAGCTTGCTAAGATGCGTAGTCTTCTTTTCCGTCAT GAAATGAAGGCAAAACGAGTCAAGAAGATAAAGTCAAAAGTGTATCATCGTTTGCTAAAA AAGGATAGATTGAAACAAGCAGGTACTACAACTGAAACAGATCCAGAAGCAGCTAAAGAG CAGGCCATGAAACAAGAATTCAAAAGGGCAGAGGAACGCTTGACTTTGAAGCACAAGAAT AGCTCCAAGTGGGCAAAGCGCATCTTAAAACGTGGATTGGATGTGCAAGATGATGGAACA CGAGCTGCTATTGCTGAACAACTGAATCAACATGCCCTTTTGTCCAGAAAAGCAAATAAT ATGAATGAGAGCAGTAGTAGTGAAGAAAGCAGTGATGAGGATGACCTTGATGAGGCCTCT GATGGATCAGATCAGGATGCTGCAGTAAAACTGTTGAAGAAAGCGAAGGAAAAGACTGCC GCAGTCTTAGAAGGGGACGAAGAATTGCCAGCATCAGGAGTGCTTTCTTTACCTTTCATG GTACGTGGATTGAAAAGAAGGAGAGAGGCGGCCAATGAAGAAGCAAAGCTTGCTCTAGAA GAGTTTGAGTCATCGTTGAAGGAATTAGAAGACAAGAACGAGCCAAAAACTCAAGAAACA AATATTCTGACTGGCAGGAGGGTTTTTGGTGCTCAAAAAGAGCAGGCACCTGAACCCAAA AAGAAAGCGACATCAGACAATTATTATGGTGACAGTGATAGTGAAGGCGAGACAGATGCC AGAGAAAATGGCATCAGTGCTCATGAAGAAAATAATTTATCTCAGAGGGAAGTTCATTTT GATCCCAATTTACTTCGTGAAGAGTCTGAGATTAATCATGATTCTCTGTTTAAGAGTTTT GACGACATTGCGAGAGACCCAGGCTCAAAGACATCATACGAAGTTTCCATTTTTGCAGCC AACTCATGGAAAAAGATGAATGATTCATCAGCTAAAGGGAAGCAGAAGAAATCTGCAAAT GCAAAGAGTGCAACCTCTTTACAGATCACAGAACCTGTTGAGAGTAAACCTGATGGGGAG GAAATTTATGAGGATAGCGATACTGATAGTGGAGGAGAAATGGTTGATGGAATTTTAACA TCTGGGACTAAGTCCACATATGAAATCCCATCTCAAGAAGAGCTTATTCGGCGTGCTTTT GCTGGTGATGATGTTGAAGACGACTTTGAGAGAGAAAAACAAGATGCGTTGAATGAGGAA GTTCCAGAGCCTGAGAAGCCTGTTTTACTGCCTGGTTGGGGACAATGGACCAATATACAA AAGAAGAGAGGTCCGCCTTCTTGGATGCTTGAAGAACATGATAATGCCAAAAAGAAAAGG GAAGAAGCTCTCAAGAAGAGGAAGGATGCTAACCTGAATCATGTTATCATCTCCGAAAAG AGGGATAAAAAGGCTGAGAATTTATACACGCCAACATTACCTTATCCGTTTACTTCCCAA GAACTTTTTGAGGGGAGCATTCGGATGCCCATTGGACCTGAATTCAACCCCGGAACAGCA CTTCCAGCTCTTATCCGCCCAGAGGTGGTAAAGAGGAGCGGTAGTATCATAAAGCCAATC AAATTCAAGGAGGTAAATCCCCATGAAAAAGGACAGGACCACAAACGTGGTGGTGTGCAG AAAAAGAAGGGTGGTAAAAGTAAGGGCAAACCCACAAAATAG

Peptide Sequence

PEP ID	Solyc09g005760.3.1
PEP Infomation	U3 small nucleolar RNA-associated protein, putative (AHRD V3.3 *** A0A061DSN9_THECC)
Sequence	MAGTKRKRREANRQNKGREFKKKNQSSSGGKDGRRKRSGPRLPNAMLKELQLPKRYADSD EEIGSDDALNDLYEYEEGVAEEESRKNRRFDPVENYQYELPEEFEDEDVPSDEEDGGDDE GGRRGDEEEEEEEEEEDDGRHSRLLQEITGLPTDAFDGKKKKNDVIISEAYSESEYNPSR DILDGDGRISIQDLLDPLHGKSDHSKLRKSMSRMEKKSMPIHAPLPKPDQERLERDAAYG FIQKDVTKWEPHVKKNREAPTIYFGKDKNVGYSTVGEIAAEFEPRSDFEKKIASLFDDHE VVEAHRKDGARLLELNKISVEDVRERQDQLAKMRSLLFRHEMKAKRVKKIKSKVYHRLLK KDRLKQAGTTTETDPEAAKEQAMKQEFKRAEERLTLKHKNSSKWAKRILKRGLDVQDDGT RAAIAEQLNQHALLSRKANNMNESSSSEESSDEDDLDEASDGSDQDAAVKLLKKAKEKTA AVLEGDEELPASGVLSLPFMVRGLKRRREAANEEAKLALEEFESSLKELEDKNEPKTQET NILTGRRVFGAQKEQAPEPKKKATSDNYYGDSDSEGETDARENGISAHEENNLSQREVHF DPNLLREESEINHDSLFKSFDDIARDPGSKTSYEVSIFAANSWKKMNDSSAKGKQKKSAN AKSATSLQITEPVESKPDGEEIYEDSDTDSGGEMVDGILTSGTKSTYEIPSQEELIRRAF AGDDVEDDFEREKQDALNEEVPEPEKPVLLPGWGQWTNIQKKRGPPSWMLEEHDNAKKKR EEALKKRKDANLNHVIISEKRDKKAENLYTPTLPYPFTSQELFEGSIRMPIGPEFNPGTA LPALIRPEVVKRSGSIIKPIKFKEVNPHEKGQDHKRGGVQKKKGGKSKGKPTK*

Transcript Sequence

Transcript ID	Solyc09g005760.3.1
Transcript Infomation	U3 small nucleolar RNA-associated protein, putative (AHRD V3.3 *** A0A061DSN9_THECC)
Sequence	AACCCTCCAAAAAATTAAAACTGTTAGGGCCTCAACTAAACCCTTCTCCTTCTTTCAACT GCCGCCCTTCAAAGCTTGTCTACCGGCGGCGCGGCGTACCGGTAATTGATCTGCAGTGAT GGCGGGGACGAAGAGAAAAAGAAGAGAAGCAAATAGGCAAAACAAAGGAAGAGAATTTAA GAAGAAAAATCAAAGTTCAAGTGGAGGAAAAGATGGTAGAAGAAAAAGGTCCGGTCCTCG TTTGCCTAATGCTATGTTAAAGGAGCTTCAATTACCGAAACGGTACGCAGATTCCGATGA AGAAATTGGCTCTGATGATGCTCTTAATGACTTGTATGAGTATGAAGAAGGGGTAGCTGA AGAGGAGTCAAGGAAGAATAGACGCTTTGACCCTGTTGAAAATTATCAATATGAGCTTCC TGAGGAGTTTGAGGATGAAGATGTACCTTCGGATGAAGAAGATGGTGGGGATGATGAGGG TGGTCGGAGAGGAGATGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGGATGATGGAAGGCA TTCACGATTGTTGCAAGAAATTACTGGACTTCCAACTGATGCTTTTGATGGCAAGAAGAA GAAAAATGACGTTATCATATCTGAGGCATATTCGGAGTCCGAGTATAATCCCAGTCGTGA TATTTTGGATGGGGATGGCCGGATTAGCATCCAGGACCTTCTGGACCCCCTCCATGGGAA GTCTGACCATAGCAAACTTAGAAAGAGCATGAGTCGGATGGAGAAGAAGTCCATGCCTAT TCATGCACCTCTTCCGAAACCGGATCAAGAAAGATTGGAAAGAGATGCTGCTTATGGTTT TATCCAGAAGGATGTTACAAAATGGGAACCTCATGTCAAAAAAAACAGAGAGGCACCGAC TATATATTTTGGCAAAGATAAGAACGTGGGATATTCTACGGTAGGAGAAATCGCTGCTGA ATTTGAACCAAGAAGTGATTTTGAGAAAAAAATTGCTTCTCTTTTTGATGACCATGAGGT CGTTGAAGCTCATAGAAAAGATGGTGCAAGACTTCTTGAACTTAATAAGATATCCGTAGA AGATGTGAGGGAGCGCCAAGACCAGCTTGCTAAGATGCGTAGTCTTCTTTTCCGTCATGA AATGAAGGCAAAACGAGTCAAGAAGATAAAGTCAAAAGTGTATCATCGTTTGCTAAAAAA GGATAGATTGAAACAAGCAGGTACTACAACTGAAACAGATCCAGAAGCAGCTAAAGAGCA GGCCATGAAACAAGAATTCAAAAGGGCAGAGGAACGCTTGACTTTGAAGCACAAGAATAG CTCCAAGTGGGCAAAGCGCATCTTAAAACGTGGATTGGATGTGCAAGATGATGGAACACG AGCTGCTATTGCTGAACAACTGAATCAACATGCCCTTTTGTCCAGAAAAGCAAATAATAT GAATGAGAGCAGTAGTAGTGAAGAAAGCAGTGATGAGGATGACCTTGATGAGGCCTCTGA TGGATCAGATCAGGATGCTGCAGTAAAACTGTTGAAGAAAGCGAAGGAAAAGACTGCCGC AGTCTTAGAAGGGGACGAAGAATTGCCAGCATCAGGAGTGCTTTCTTTACCTTTCATGGT ACGTGGATTGAAAAGAAGGAGAGAGGCGGCCAATGAAGAAGCAAAGCTTGCTCTAGAAGA GTTTGAGTCATCGTTGAAGGAATTAGAAGACAAGAACGAGCCAAAAACTCAAGAAACAAA TATTCTGACTGGCAGGAGGGTTTTTGGTGCTCAAAAAGAGCAGGCACCTGAACCCAAAAA GAAAGCGACATCAGACAATTATTATGGTGACAGTGATAGTGAAGGCGAGACAGATGCCAG AGAAAATGGCATCAGTGCTCATGAAGAAAATAATTTATCTCAGAGGGAAGTTCATTTTGA TCCCAATTTACTTCGTGAAGAGTCTGAGATTAATCATGATTCTCTGTTTAAGAGTTTTGA CGACATTGCGAGAGACCCAGGCTCAAAGACATCATACGAAGTTTCCATTTTTGCAGCCAA CTCATGGAAAAAGATGAATGATTCATCAGCTAAAGGGAAGCAGAAGAAATCTGCAAATGC AAAGAGTGCAACCTCTTTACAGATCACAGAACCTGTTGAGAGTAAACCTGATGGGGAGGA AATTTATGAGGATAGCGATACTGATAGTGGAGGAGAAATGGTTGATGGAATTTTAACATC TGGGACTAAGTCCACATATGAAATCCCATCTCAAGAAGAGCTTATTCGGCGTGCTTTTGC TGGTGATGATGTTGAAGACGACTTTGAGAGAGAAAAACAAGATGCGTTGAATGAGGAAGT TCCAGAGCCTGAGAAGCCTGTTTTACTGCCTGGTTGGGGACAATGGACCAATATACAAAA GAAGAGAGGTCCGCCTTCTTGGATGCTTGAAGAACATGATAATGCCAAAAAGAAAAGGGA AGAAGCTCTCAAGAAGAGGAAGGATGCTAACCTGAATCATGTTATCATCTCCGAAAAGAG GGATAAAAAGGCTGAGAATTTATACACGCCAACATTACCTTATCCGTTTACTTCCCAAGA ACTTTTTGAGGGGAGCATTCGGATGCCCATTGGACCTGAATTCAACCCCGGAACAGCACT TCCAGCTCTTATCCGCCCAGAGGTGGTAAAGAGGAGCGGTAGTATCATAAAGCCAATCAA ATTCAAGGAGGTAAATCCCCATGAAAAAGGACAGGACCACAAACGTGGTGGTGTGCAGAA AAAGAAGGGTGGTAAAAGTAAGGGCAAACCCACAAAATAGACTGTGGGGGTGAGAACCAT GAGGTTTGACATTCTCACGAAGAAATCTGTATGGAGAATCTGCAGTTCCGAGATCCCTTG GTTGATAAATCAGTACTCATGGTCTTTCTTGCCATGTTCTTGTTTCGTCTTCACAGTTGG GGCCTTGTTTCTGCTTTCATAGAAAGCAGTTTTACACAATGAAGGCTCGCGAATCATGAA AATGCAATGGTTTACTCTTCACAGATGCAGCAAAAGGAGTTCTATTTTTGGTTCTAATGT AATTCTTTAGCAGATGGTTCTATAGTTCTTGTGAGTGTATTAAGTGAAGTAGCTATTTTG GGATTTGAAAGTATTTAATATATGTATAATTGGTTCAAGTGAAGCAGAGGGGATACAAAA TTTTGTTTCATCTATTGCAAGTTTAGAACTTAGCTATGATTTTCTTAAAACGAATATCGA GTATGAAATGTTTATGTGCCAAACAAATCCCAATCTCAAATAATAATTATTGTTGTAGTT ATGGTA