Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc09g005600.3.1
CDS Infomation	Transducin family protein / WD-40 repeat family protein, putative isoform 5 (AHRD V3.3 *** A0A061EQ99_THECC)
Sequence	ATGTTCGCGAAGAAGCTTTTTCAGAAAGCTACTCAATATCATCATAATCATCATCACCAG ACAAATGGAAGTGGTTTAACAGCAAGTGACCTGAATGTTCGTGCTACTGTACATTATGGT ATCCCGTCAACCGCATCAATTCTTGCAGTAGACTCCGTCCAGCGCCTATTGGCTATTGGA ACATTGGATGGTAGGATAAAAGTGATTGGTGGGGACAATATTGAAGGTCTCTTGATTTCT CCAAAGCAGTTGCCATACAAATATCTAGAGTTCCTTCAAAATCAGGGTTTTCTTGTCAAC ATCACAAATGAAAATGATATTCAGGTTTGGAATCTCAAAAGCAGATCTGTAGCTTGTGAT TTGCAATGGGAATCAAATATAACTGCCTTTTCAGTTATCAATGGCTCTTCCTTCATGTAT GTTGGAGATGAATATGGAACAATCTCAGTTTTGAAGTTCCATGTTGAGAACAGAGAGCTG CTGCAACTGCCATATCAGATCATATGGAGTTCTCTTTCTGAAGCAACTAGTTTTCCATAT TCAGATCATCAACCAGTTGTTGGAATTCTCCCGCAACCTTTTACATCGGGAAATAGATTA TTGATTGCATACGAGTGTGGTTTAATTATACTATGGGATGTCGTCGAAGCCCATGTTATC ATTGTCAAAGGTGATAAAGATCTCCATTTGAAGGATGGTGCTTTTAAAAAGAACGCAGAT TCCAGCTCTCCTAATGATCTATTGCAGCACCAATTCGAGGAGAAAGAAATAACCACACTT TGCTGGGCATCCATTGATGGATCCATTCTTGCTGCTGGGTACATAGATGGAGATATTCTG CTTTGGAAAATGTCAAAATCGTCTGCAAGCAAAGGTCAGGAAGCCGGACCATTTGATAAT GTTGTTAAGCTACAGCTGTCTTCTGTTGAAAAGAGGCTTCCAATTATTGTCTTACACTGG TGGGCAAACAGTAAATCCCAGAATAATAGCGATGGCCATCTCCTCATTTATGGCGGTGAT GAAATAGGATCCGATGAAGTCATTACGATCCTTACACTTGAGTGGTCGTCTGGAATAGAG ACTTTGAAATGTGTTGGTCGTGTTGACCTCACTCTTAGTGGCTCATTTGCAGATACGATC TTATTACCAACTACAGGGGCAACAACACCTGATGGAAAAGCTGCTTTATTTGTTTTGATG AGCCCTGGACAACTAAACCTTTTTGATTGTTCAACCTTGGCCGACTTGGTATCCAAAGAG GAGAAAAAAGTATCTCTATCAGCTAAGGATTTTCCTGTAGAATTGCCAACTGTTGATCCT TCCATGACAGCGACAAAGCTTACCCAGTTGCATTCAGATGGAAACTTAACGGAGCTTCTG CAAGAGTTCTTCGCAGCAACATCATCTGGGGCTAGCAGATGGCCCTTGACTGGAGGGGTG TATAATCATACTTCTCGAGCTGAGACTAACAGGATTCAGAGAGTTTTTACAGCAGGTTAT CAGGATGGATCTGTAAGGATGTGGGATGCCACTCATCCGGTCCTCCTCCTCCTTTGTGTC TTGGATAGAGAGGTTAAAGGTGTTAATACAGTTATATCAAGTGCTTCAGTTTCAAAAATA GATTTCTGCTTCCAGACATTAAGATTGGCAGTTGGGGATGCAAGTGGTCTGGTGCGTCTT TATGATTTCAAACATAGTGATATGGGAAACTTCCACGTTGTTACTGATGCTAAAAGTGAA GTTCATGAGTTGGCACAAGGTCAAGGACCTACTTGCAGAGCTGTTCTAAAGCTTCTCGAT GTTCGAGTCCGAGCAATTGAGTTTGTAAATCATGGAGCCAAACTTGTAGTTGGATACGAA AATGCTAAGGTTGCAGTGCTTGATATGACTTCATTATCAGTATTGTTCTTGTCAGACTCC GCATCTGCTGGTTGCTCTCCACTGGTCACTCTGATTACAAAGAGATTTGTGCAAAGTGAC AGTAATAGCAAAAGCCCAAAACAATCAGAGCTTGCAGAAAAGCGTATGGAGGAACTCATG TTCATTTTAACTGAGGATGCAAAGATATATGTAATTGATGGTGGTAATGGTAAAACGTAT GGTTCAGGGCCCTTGCATTTAAAGAAAGTGTCGACTGCAATTTCTATGTATGTCATAGAA AACAACATCCCATTTTCTTATGTAATTAGCAAGCAGCCAGAGTCCAGCAAGGATGATGCA GCTAGTAATGAGCCTTCACAGGAAATGACCACTCGTGACCTAAGTGATACAGTTCCCTTC CTAGAAAATGACTCCTCCAGGAAATACTTTGAGGAGTCCTTTATCCTACTTTGCTGTAAA GATTCAATACGCACTTATGCTACAAAATCTGTAGTTCATGGTGATAACAAATCTGTTTGC AAAGTGAAGCTCGACAAGCCTTGTTGTTGGACTACTACTCTTGTGAAAGATGGGAAAGCT TGTGCGCTATTATTACTCTTTCAGACTGGGGATATCGAGATTCGATCTTTGCCTGATCTA GAGTTGCTGGAGCGAACTTCTTTAATGTCGGTTTTAAGGTGGAATTTCAAACCAAATATG GACAGGGCAATGAGTTCCATGGAGAATGGCCATATTATTCTGGCAAATGGTTCTGAACTG GCTTTAGTGTCCCTATTAGCCAGTGAAAATGATTTCAGAATTCCAGAATCTTTGCCGTCT CTTCATGATGAAGTGCTCGCAGCTGCAGCAGATGCTGCCATGAAATTCTCCACTCAGAAG AAGAAACAGGGTGGGGGGCCAAATATTTTAGGTACTCTAGTTAAAGGATTTAAAGCAGGA AAAACAAATCAAAATATGGATTTCAGTCAGATGACGCAGTCAAACTTTAGTCATCTGGAA GGTGTTTTTATGAAGAACCCACTCCACTCAGAACTGTCCCCAACTAAGGAAGTTCTAGAA GAACTGGAGCTCGATATAGATGATATTGAAATCGATGACCCTGTCCCTGTGGCTTCTACT TCATCTCATAACACACAAAATAGCAAAAGAGGAACTGAAAGAGAAAAGTTGCTTGATTCT GTGGGTGATGATGCCAAACCCAGACCTAGGACACGTGAAGAAATCATTGCAAAATATAGA AAAACTGGGGTCCAGGATGCATCATCAGCGGCTGGACAAGCAAGAGACAAGCTTCTAGAA CGCCAAGAAAAACTCGAGAGAATCAACCGACGAACTGAAGAACTACGCAGTGGGGCTGAA GACTTTGCATCATTGGCAAATGAGCTTGTTAAGGTAATGGAAAATCGCAATCGGAAATGG TGGCAGATATGA

Peptide Sequence

PEP ID	Solyc09g005600.3.1
PEP Infomation	Transducin family protein / WD-40 repeat family protein, putative isoform 5 (AHRD V3.3 *** A0A061EQ99_THECC)
Sequence	MFAKKLFQKATQYHHNHHHQTNGSGLTASDLNVRATVHYGIPSTASILAVDSVQRLLAIG TLDGRIKVIGGDNIEGLLISPKQLPYKYLEFLQNQGFLVNITNENDIQVWNLKSRSVACD LQWESNITAFSVINGSSFMYVGDEYGTISVLKFHVENRELLQLPYQIIWSSLSEATSFPY SDHQPVVGILPQPFTSGNRLLIAYECGLIILWDVVEAHVIIVKGDKDLHLKDGAFKKNAD SSSPNDLLQHQFEEKEITTLCWASIDGSILAAGYIDGDILLWKMSKSSASKGQEAGPFDN VVKLQLSSVEKRLPIIVLHWWANSKSQNNSDGHLLIYGGDEIGSDEVITILTLEWSSGIE TLKCVGRVDLTLSGSFADTILLPTTGATTPDGKAALFVLMSPGQLNLFDCSTLADLVSKE EKKVSLSAKDFPVELPTVDPSMTATKLTQLHSDGNLTELLQEFFAATSSGASRWPLTGGV YNHTSRAETNRIQRVFTAGYQDGSVRMWDATHPVLLLLCVLDREVKGVNTVISSASVSKI DFCFQTLRLAVGDASGLVRLYDFKHSDMGNFHVVTDAKSEVHELAQGQGPTCRAVLKLLD VRVRAIEFVNHGAKLVVGYENAKVAVLDMTSLSVLFLSDSASAGCSPLVTLITKRFVQSD SNSKSPKQSELAEKRMEELMFILTEDAKIYVIDGGNGKTYGSGPLHLKKVSTAISMYVIE NNIPFSYVISKQPESSKDDAASNEPSQEMTTRDLSDTVPFLENDSSRKYFEESFILLCCK DSIRTYATKSVVHGDNKSVCKVKLDKPCCWTTTLVKDGKACALLLLFQTGDIEIRSLPDL ELLERTSLMSVLRWNFKPNMDRAMSSMENGHIILANGSELALVSLLASENDFRIPESLPS LHDEVLAAAADAAMKFSTQKKKQGGGPNILGTLVKGFKAGKTNQNMDFSQMTQSNFSHLE GVFMKNPLHSELSPTKEVLEELELDIDDIEIDDPVPVASTSSHNTQNSKRGTEREKLLDS VGDDAKPRPRTREEIIAKYRKTGVQDASSAAGQARDKLLERQEKLERINRRTEELRSGAE DFASLANELVKVMENRNRKWWQI*

Transcript Sequence

Transcript ID	Solyc09g005600.3.1
Transcript Infomation	Transducin family protein / WD-40 repeat family protein, putative isoform 5 (AHRD V3.3 *** A0A061EQ99_THECC)
Sequence	TTTAATCAAAGTCTCAAAGCTTTTAGTTTATACCATTAGAGCCAAACAAACAGAAGAATG CCGAACGCCTGAAAGCCAATTTAAAATAGTGTTAAAGTAATTCACAACCGGAATTCGATC CAACGATTCTTCACTTCTCATTTCGCCATGTTCGCGAAGAAGCTTTTTCAGAAAGCTACT CAATATCATCATAATCATCATCACCAGACAAATGGAAGTGGTTTAACAGCAAGTGACCTG AATGTTCGTGCTACTGTACATTATGGTATCCCGTCAACCGCATCAATTCTTGCAGTAGAC TCCGTCCAGCGCCTATTGGCTATTGGAACATTGGATGGTAGGATAAAAGTGATTGGTGGG GACAATATTGAAGGTCTCTTGATTTCTCCAAAGCAGTTGCCATACAAATATCTAGAGTTC CTTCAAAATCAGGGTTTTCTTGTCAACATCACAAATGAAAATGATATTCAGGTTTGGAAT CTCAAAAGCAGATCTGTAGCTTGTGATTTGCAATGGGAATCAAATATAACTGCCTTTTCA GTTATCAATGGCTCTTCCTTCATGTATGTTGGAGATGAATATGGAACAATCTCAGTTTTG AAGTTCCATGTTGAGAACAGAGAGCTGCTGCAACTGCCATATCAGATCATATGGAGTTCT CTTTCTGAAGCAACTAGTTTTCCATATTCAGATCATCAACCAGTTGTTGGAATTCTCCCG CAACCTTTTACATCGGGAAATAGATTATTGATTGCATACGAGTGTGGTTTAATTATACTA TGGGATGTCGTCGAAGCCCATGTTATCATTGTCAAAGGTGATAAAGATCTCCATTTGAAG GATGGTGCTTTTAAAAAGAACGCAGATTCCAGCTCTCCTAATGATCTATTGCAGCACCAA TTCGAGGAGAAAGAAATAACCACACTTTGCTGGGCATCCATTGATGGATCCATTCTTGCT GCTGGGTACATAGATGGAGATATTCTGCTTTGGAAAATGTCAAAATCGTCTGCAAGCAAA GGTCAGGAAGCCGGACCATTTGATAATGTTGTTAAGCTACAGCTGTCTTCTGTTGAAAAG AGGCTTCCAATTATTGTCTTACACTGGTGGGCAAACAGTAAATCCCAGAATAATAGCGAT GGCCATCTCCTCATTTATGGCGGTGATGAAATAGGATCCGATGAAGTCATTACGATCCTT ACACTTGAGTGGTCGTCTGGAATAGAGACTTTGAAATGTGTTGGTCGTGTTGACCTCACT CTTAGTGGCTCATTTGCAGATACGATCTTATTACCAACTACAGGGGCAACAACACCTGAT GGAAAAGCTGCTTTATTTGTTTTGATGAGCCCTGGACAACTAAACCTTTTTGATTGTTCA ACCTTGGCCGACTTGGTATCCAAAGAGGAGAAAAAAGTATCTCTATCAGCTAAGGATTTT CCTGTAGAATTGCCAACTGTTGATCCTTCCATGACAGCGACAAAGCTTACCCAGTTGCAT TCAGATGGAAACTTAACGGAGCTTCTGCAAGAGTTCTTCGCAGCAACATCATCTGGGGCT AGCAGATGGCCCTTGACTGGAGGGGTGTATAATCATACTTCTCGAGCTGAGACTAACAGG ATTCAGAGAGTTTTTACAGCAGGTTATCAGGATGGATCTGTAAGGATGTGGGATGCCACT CATCCGGTCCTCCTCCTCCTTTGTGTCTTGGATAGAGAGGTTAAAGGTGTTAATACAGTT ATATCAAGTGCTTCAGTTTCAAAAATAGATTTCTGCTTCCAGACATTAAGATTGGCAGTT GGGGATGCAAGTGGTCTGGTGCGTCTTTATGATTTCAAACATAGTGATATGGGAAACTTC CACGTTGTTACTGATGCTAAAAGTGAAGTTCATGAGTTGGCACAAGGTCAAGGACCTACT TGCAGAGCTGTTCTAAAGCTTCTCGATGTTCGAGTCCGAGCAATTGAGTTTGTAAATCAT GGAGCCAAACTTGTAGTTGGATACGAAAATGCTAAGGTTGCAGTGCTTGATATGACTTCA TTATCAGTATTGTTCTTGTCAGACTCCGCATCTGCTGGTTGCTCTCCACTGGTCACTCTG ATTACAAAGAGATTTGTGCAAAGTGACAGTAATAGCAAAAGCCCAAAACAATCAGAGCTT GCAGAAAAGCGTATGGAGGAACTCATGTTCATTTTAACTGAGGATGCAAAGATATATGTA ATTGATGGTGGTAATGGTAAAACGTATGGTTCAGGGCCCTTGCATTTAAAGAAAGTGTCG ACTGCAATTTCTATGTATGTCATAGAAAACAACATCCCATTTTCTTATGTAATTAGCAAG CAGCCAGAGTCCAGCAAGGATGATGCAGCTAGTAATGAGCCTTCACAGGAAATGACCACT CGTGACCTAAGTGATACAGTTCCCTTCCTAGAAAATGACTCCTCCAGGAAATACTTTGAG GAGTCCTTTATCCTACTTTGCTGTAAAGATTCAATACGCACTTATGCTACAAAATCTGTA GTTCATGGTGATAACAAATCTGTTTGCAAAGTGAAGCTCGACAAGCCTTGTTGTTGGACT ACTACTCTTGTGAAAGATGGGAAAGCTTGTGCGCTATTATTACTCTTTCAGACTGGGGAT ATCGAGATTCGATCTTTGCCTGATCTAGAGTTGCTGGAGCGAACTTCTTTAATGTCGGTT TTAAGGTGGAATTTCAAACCAAATATGGACAGGGCAATGAGTTCCATGGAGAATGGCCAT ATTATTCTGGCAAATGGTTCTGAACTGGCTTTAGTGTCCCTATTAGCCAGTGAAAATGAT TTCAGAATTCCAGAATCTTTGCCGTCTCTTCATGATGAAGTGCTCGCAGCTGCAGCAGAT GCTGCCATGAAATTCTCCACTCAGAAGAAGAAACAGGGTGGGGGGCCAAATATTTTAGGT ACTCTAGTTAAAGGATTTAAAGCAGGAAAAACAAATCAAAATATGGATTTCAGTCAGATG ACGCAGTCAAACTTTAGTCATCTGGAAGGTGTTTTTATGAAGAACCCACTCCACTCAGAA CTGTCCCCAACTAAGGAAGTTCTAGAAGAACTGGAGCTCGATATAGATGATATTGAAATC GATGACCCTGTCCCTGTGGCTTCTACTTCATCTCATAACACACAAAATAGCAAAAGAGGA ACTGAAAGAGAAAAGTTGCTTGATTCTGTGGGTGATGATGCCAAACCCAGACCTAGGACA CGTGAAGAAATCATTGCAAAATATAGAAAAACTGGGGTCCAGGATGCATCATCAGCGGCT GGACAAGCAAGAGACAAGCTTCTAGAACGCCAAGAAAAACTCGAGAGAATCAACCGACGA ACTGAAGAACTACGCAGTGGGGCTGAAGACTTTGCATCATTGGCAAATGAGCTTGTTAAG GTAATGGAAAATCGCAATCGGAAATGGTGGCAGATATGAAGATATCATCATCCTTTTCTG GAAACAGAAGATTCATCATTGTTACACATAAGAAAGTATCGATATTTGACATATATACTG TACAGATCGATATGGCTTTTCAAAAGTTTGGGTTAAAGAAACTGATGAGAGTGTAACATA GATTATTTGTGAAAAGCTTAGGTGGTTTTGTTATTTTTTGCTCTTCATTTTCATTATCTT TTGTTTGTCTGCAAAGGAAAATTATGTAACAGACGGCATATTTATTGTTTGTGAAGTGAG TAAAGCCTTTCATAAAAAATACGACGACTAAGAATTGTAATGTGGATCTTTTATACTATC TTTGAGTTTCTGAGTGATGCCAATCTAATCTCCAATTTTTTTGGTTATTTGGTTTTAACT TTTGAATTATAGATGAAACTTTGGATTTTATTTTTAATATTTATGGATTTCGAATTGGAT ATCGTACTAAGGTATTTCAGATAACTTAAAAGTTGAATGTTTTATATTTGAATTGTAATT TTATGGATCCAAAATCGAATATCTGCCCTGTCAATTCTTTAGAACTATAACATTGAAACC ACCTCTGCAGTACCTAGAACACTTCTCACCTGGAACTGACATGTAAATTGCACTGATATA CCATTAACTATTGTGATCAAGATTGATCATATCTGCATATGCATTTCAAAAATAAGATAA AACAGGGCTACTTATAAAGCATTTCATTATTCTTTCAACCTGCTACTAGATACTGTTTGC ATTGTGAGAGTGAAGTGTTTGTACATCATAAATATCAAATGTCACAAAGATTTGAGGAAC AAAAAAGTCCTTTTTATCGATACCATATAACCATTGATCTCGTGAAATCTACACATCTAC GACCAGGAAGATGCACCAAGGCCATCAACTACCGCTGGGTTAGAAATCTTTCTGGCAACT AGATCTTTCAGCTCGAGTTCGCCAGGAAACCTATTCTCTTTCAGTTTAGAGAAAACCTGT CATATAAATTAAAATTAGACAGTGAGAGGAGACGCAAGAATGTACAACAAGCTACTTGGC AATCAATAAAAGCTTCATATCACATGCTACAGCGGCTACAAAGATCTCTGTGAATCATGA TACTTCAAAAGTTAGTTACACTTGAAATCCTTCATATAAAGGCATTGCTCAAAGATGATT TTCACCAAATTTAAAAGAAACATATAATATATATGAAGTGGGAGTACAAGTATAACATGC CAACGACATCCTCAGTCCGAAAATGAACCATAATTTGTCTTGGCAATTTTTTCTATATGA GCGAAAGAGAACGAGAAGTGTTCAGAGAGTTAAAGGTCGTTTTTTTTTTTGCATTCATGG TTTCATATCAGATGAAACAAAGTAATGTTCCCCTTCAAAGAAGTTAACAAAGTAAAATTT AACATAAACCTATCTAATAATGGATGGCTGATAGTGCATCACAGATAGCTAAAATGATCA AACAGCCTCTTTAGATGGACATCTATCTAGTCTATACTAAAGTAAAAATGATTTCCAGAA TTTACTTCTCACAAAATCAGATGGTTTTAGACACAAAAAGGCACAGAATGGTAATCATTT CCTACATTTTTAACCTCAAGGAAAAAGGATATACATAGAAAGATTGAACAGTACATACCA GTTCACCATTACAATACACTTCAAAAGCACCAGAGCTTTGCAGCATGGACTGAAAGAAAT TTCCTAGGAGCCAAGTAGTTGCCATAGTCCCAAATCTGTTCGCACGTAACTGATAGAACC ATGGAGGTGGTACCGCAATACCCAACCTAGGAAATATTTGTTCACCAGCCATTACAAGGC CAATGACTCCAAATTGGAAAACAGGTACTACTTTTCCCAGCAAACGTTTTGGAAGTGGAG GAGGATAGTTAGCAAGGACGACATGGATACCAGGAACTGATTATCCAACATGTTTTTCAT CGTCACAGCTGTCCCTCTGCCAAGAAACATGAAACTTAAATGCAGTTTGATATGGTAAGA CTAGATGACCAATTGAACAAAGTAATGGAAAGATAAACAAATATTACTTTTGCATATCTT TTCTTATCCATACAAAAGAACCACATCTATGATTAAAATATTTACGCACCAAACATACAA AACATGCATTTCTATGGATCATGTATATTGCATATATGGGAAAAGTTTTTGCATCTTAAC GGAATTCAACGAATCGCCACAAAAGGAAGCTGAACAACATCCTCTCTACAAATCAAATGA GAAGGTTATGGGGCATTCTAAAAGACCTATACAGTAAGGGTTCCCAACATTCTCCTTTAG TTTTGTGACCTCTTTTCTTTTTTTCCATCGTGCATTTAAGACTATCACACTACTTAAAAT GACGTTAAGCACTCAATCAGATAAGTTCAAATCATGTTAGAGAGCCAAGATATTATGTTC TTCGATAACTCAAAAAATTCTTGGCAGTATCATATATTTTCTAGTTGATATAAACGATCT ATACAACATCTCATGACATAAGCTACATTACAAGTTCAATAGCTAGTTCAAAATCCAAAT TTTAGAACGAATGACAT