Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc09g005000.1.1
CDS Infomation

Clade VI lectin receptor kinase (AHRD V3.3 *** K4CPZ0_SOLLC)
Sequence

ATGGACAATCCCTATTGCCTAGTTATTATTCTTGCATTGATCTTTTGCCCTATTCTTGTG
AGAGCTCAATCTTTTGATTTTGCTTACAATGGATTCAATAACTCAAATATCATTAGAGAC
GGAGTAGCAATAATCAATTCAAGTGGTGCACTTAAGCTCACTAATAGATCATATAATGTT
ATAGGTCATGCTTTCCACCCCAATCCTGTACCAATTTTCAACTCCAGTACTAAAAATGTT
ACTTCATTTAGTACATACTTCGTCTTCGCCATCGTCCCTCTTGAGAAAACCTCTGGTGGC
TTTGGCTTTGCTTTCACCTTATCTCCATCCCCGGGTTTTCCGGGTGCTCAGGGTGATCAT
TTTCTTGGAGTCGTCAACATTATGAACGATGGCAATGATACTAACCACATCTTCATGGTT
GAATTTGACACTGTGAATGGTCACAATGAAGGTGTAGACACAGATGGAAATCACATTGGG
GTCAACAGAAATGGCATGAGCCCTACAGCGTCAAAATCAGCTGACTACTATGTTAATGAT
TCTGCTGTAGCGGAGCAGGTAAATCTACAAAGTGGAGAATCAATTCAAGCTTGGATTGAT
TATGATGGAATGAGCAAAGTGGTGAATGTAACTATATCTCCCATAACAGTTCCAAAGCCA
GGTAGGCCTCTGATCAGTGAGGTCGTAGATTTATCTACTGTGTTGAACGAAACTATGTAT
GCTGGTTTCTCAGCAGCCACGGGAGACAAAGCGAGCTCTCATTACATCTTGGGTTGGAGT
TTTCGGTTGAATGGAGCTGCTGATCCTTTAGAGCTTGTAAAGCTACCTGTTGCCCCACCT
GAAGTGGTAACATCATCCAAGAATTCCCATCTCAAAAGGGCCTTGATCGGAACATTTTGC
TCCGTCGTTATCCTGCTCCTTGGGGCATTTTACATCTATACAAGGATGAGGCAACATGAA
GTTCTAGAGGACTGGGAGCTGGATTGTCCTCACAGGTTCCGATATAGACATCTTTACAAG
GCAACTAAGGGATTCCAGGAGAGTGAACTAATTGGAGTTGGTGGATTTGGTGCTGTTTAC
AAGGGTGTTTTGCCTACTAATGGAGCAGAAGTTGCAGTGAAGAAGATATCGAGCAATTCT
CTTCAAGGAATGAGAGAATTTGCAGCGGAGATCGAAAGCTTAGGCAGGTTAAGGCACAAA
CACTTGATCAACCTTCAAGGCTGGTGCAAGAACAAAAATGATCTTCTCCTAGTGTATGAC
TATGTCCCAAATGGAAGTCTTGATTCATTACTTTACAGACAGAAGAGGGACATTGTTTTA
ACATGGGAACAGAGATTTAACATCATCAAAGGGATTGCTGCAGGGCTTCTTTACTTGCAT
GAAGAATGGGAACAAGTGGTAATACATCGCGATGTGAAAAGCAGTAACGTCCTTATTGAT
GGGGAAATGAATGGCCGGTTAGGGGATTTTGGGTTAGCAAGATTATACGACCATGGCAAG
AATTCACACACAACAAATGTTGTTGGCACAATAGGGTACATTGCACCAGAATTGACACGG
ACAGGGAAGGCCTCAACGAGCACGGATGTGTATGCATATGGTGTACTACTTCTTGAAGTA
GCTAGTGGAAGACCTCCTATTGTCTATGAACCAGGGAAAGGAGCTTTAGTACTAGCTGAT
TGGGTGATTGAATGTTTACAACTAGGTAATATTCTTGATGCAGTTGATCAAAGGTTGAAT
TCAGTGTATGTAGATAAAGAGGTTCAAATGATTTTCAGACTTGGGCTTGTTTGTTCTCAC
CCAAGGCCAGAAGCTAGGCCAACAATGAGACAAGTAATGAAGTACCTCAATGGAGATGAA
TCACTTCCAGTTTTTGAGCAACAGTTGAGTTGTATTGGATCTGATAGGGTTGATGAAATC
ACAGCCAAGTTCTTGGAAGTGTTTTCTACTGATACAATCAATATATCACGTCGTTCGCTA
TCCGTCGGACAGATATCATCTAGTTCACTCCATTCTGGTCGATGA

Peptide Sequence

PEP ID

Solyc09g005000.1.1
PEP Infomation

Clade VI lectin receptor kinase (AHRD V3.3 *** K4CPZ0_SOLLC)
Sequence

MDNPYCLVIILALIFCPILVRAQSFDFAYNGFNNSNIIRDGVAIINSSGALKLTNRSYNV
IGHAFHPNPVPIFNSSTKNVTSFSTYFVFAIVPLEKTSGGFGFAFTLSPSPGFPGAQGDH
FLGVVNIMNDGNDTNHIFMVEFDTVNGHNEGVDTDGNHIGVNRNGMSPTASKSADYYVND
SAVAEQVNLQSGESIQAWIDYDGMSKVVNVTISPITVPKPGRPLISEVVDLSTVLNETMY
AGFSAATGDKASSHYILGWSFRLNGAADPLELVKLPVAPPEVVTSSKNSHLKRALIGTFC
SVVILLLGAFYIYTRMRQHEVLEDWELDCPHRFRYRHLYKATKGFQESELIGVGGFGAVY
KGVLPTNGAEVAVKKISSNSLQGMREFAAEIESLGRLRHKHLINLQGWCKNKNDLLLVYD
YVPNGSLDSLLYRQKRDIVLTWEQRFNIIKGIAAGLLYLHEEWEQVVIHRDVKSSNVLID
GEMNGRLGDFGLARLYDHGKNSHTTNVVGTIGYIAPELTRTGKASTSTDVYAYGVLLLEV
ASGRPPIVYEPGKGALVLADWVIECLQLGNILDAVDQRLNSVYVDKEVQMIFRLGLVCSH
PRPEARPTMRQVMKYLNGDESLPVFEQQLSCIGSDRVDEITAKFLEVFSTDTINISRRSL
SVGQISSSSLHSGR*

Transcript Sequence

Transcript ID

Solyc09g005000.1.1
Transcript Infomation

Clade VI lectin receptor kinase (AHRD V3.3 *** K4CPZ0_SOLLC)
Sequence

ATGGACAATCCCTATTGCCTAGTTATTATTCTTGCATTGATCTTTTGCCCTATTCTTGTG
AGAGCTCAATCTTTTGATTTTGCTTACAATGGATTCAATAACTCAAATATCATTAGAGAC
GGAGTAGCAATAATCAATTCAAGTGGTGCACTTAAGCTCACTAATAGATCATATAATGTT
ATAGGTCATGCTTTCCACCCCAATCCTGTACCAATTTTCAACTCCAGTACTAAAAATGTT
ACTTCATTTAGTACATACTTCGTCTTCGCCATCGTCCCTCTTGAGAAAACCTCTGGTGGC
TTTGGCTTTGCTTTCACCTTATCTCCATCCCCGGGTTTTCCGGGTGCTCAGGGTGATCAT
TTTCTTGGAGTCGTCAACATTATGAACGATGGCAATGATACTAACCACATCTTCATGGTT
GAATTTGACACTGTGAATGGTCACAATGAAGGTGTAGACACAGATGGAAATCACATTGGG
GTCAACAGAAATGGCATGAGCCCTACAGCGTCAAAATCAGCTGACTACTATGTTAATGAT
TCTGCTGTAGCGGAGCAGGTAAATCTACAAAGTGGAGAATCAATTCAAGCTTGGATTGAT
TATGATGGAATGAGCAAAGTGGTGAATGTAACTATATCTCCCATAACAGTTCCAAAGCCA
GGTAGGCCTCTGATCAGTGAGGTCGTAGATTTATCTACTGTGTTGAACGAAACTATGTAT
GCTGGTTTCTCAGCAGCCACGGGAGACAAAGCGAGCTCTCATTACATCTTGGGTTGGAGT
TTTCGGTTGAATGGAGCTGCTGATCCTTTAGAGCTTGTAAAGCTACCTGTTGCCCCACCT
GAAGTGGTAACATCATCCAAGAATTCCCATCTCAAAAGGGCCTTGATCGGAACATTTTGC
TCCGTCGTTATCCTGCTCCTTGGGGCATTTTACATCTATACAAGGATGAGGCAACATGAA
GTTCTAGAGGACTGGGAGCTGGATTGTCCTCACAGGTTCCGATATAGACATCTTTACAAG
GCAACTAAGGGATTCCAGGAGAGTGAACTAATTGGAGTTGGTGGATTTGGTGCTGTTTAC
AAGGGTGTTTTGCCTACTAATGGAGCAGAAGTTGCAGTGAAGAAGATATCGAGCAATTCT
CTTCAAGGAATGAGAGAATTTGCAGCGGAGATCGAAAGCTTAGGCAGGTTAAGGCACAAA
CACTTGATCAACCTTCAAGGCTGGTGCAAGAACAAAAATGATCTTCTCCTAGTGTATGAC
TATGTCCCAAATGGAAGTCTTGATTCATTACTTTACAGACAGAAGAGGGACATTGTTTTA
ACATGGGAACAGAGATTTAACATCATCAAAGGGATTGCTGCAGGGCTTCTTTACTTGCAT
GAAGAATGGGAACAAGTGGTAATACATCGCGATGTGAAAAGCAGTAACGTCCTTATTGAT
GGGGAAATGAATGGCCGGTTAGGGGATTTTGGGTTAGCAAGATTATACGACCATGGCAAG
AATTCACACACAACAAATGTTGTTGGCACAATAGGGTACATTGCACCAGAATTGACACGG
ACAGGGAAGGCCTCAACGAGCACGGATGTGTATGCATATGGTGTACTACTTCTTGAAGTA
GCTAGTGGAAGACCTCCTATTGTCTATGAACCAGGGAAAGGAGCTTTAGTACTAGCTGAT
TGGGTGATTGAATGTTTACAACTAGGTAATATTCTTGATGCAGTTGATCAAAGGTTGAAT
TCAGTGTATGTAGATAAAGAGGTTCAAATGATTTTCAGACTTGGGCTTGTTTGTTCTCAC
CCAAGGCCAGAAGCTAGGCCAACAATGAGACAAGTAATGAAGTACCTCAATGGAGATGAA
TCACTTCCAGTTTTTGAGCAACAGTTGAGTTGTATTGGATCTGATAGGGTTGATGAAATC
ACAGCCAAGTTCTTGGAAGTGTTTTCTACTGATACAATCAATATATCACGTCGTTCGCTA
TCCGTCGGACAGATATCATCTAGTTCACTCCATTCTGGTCGATGA