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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g083260.3.1
CDS Infomation

snurportin-1 protein (AHRD V3.3 *** AT4G24880.1)
Sequence

ATGAGTTCACACGACATACGCCGTCCATTTAAACGCCCGGCGATCTCCGACCAACAAAGA
CGACGAGAACTTTCATTGCTCCGCCAGTCCCAAAACCGCCACGACGCTCAGCTACAAGCC
CGTCGTTTAGCTTCCACTGTCCTCTCTCTTCAATCTGACTACAACTCCTCTTCCCAAGAA
CAGCAGGTCGACTTAGAAGTTACAGACGAACTTGAATCCTGTCCCGAAGAAGTCGAAGAC
GATTATGGACATCATAAGGACGCACATGATCTTCGTCAAGCTACCAAGCTGAGAGGACCT
GACGCTCGGTTATGGTTTGCCAAGCAGCTTATGCTTCCTGAGTGGATGATTGATGTTCCC
GATAAATTGAATACCGATTGGTATGTATTTGCTAGGCCTGCTGGAAAACGATGTTTCGTT
GTTTCTTCAAATGGAACAACAATCAGTAGACTGCGCAATGGAGTTCTCTTGCACCGTTTT
CCTTCTGCTCTACCCAATGGTGCCAGGACTAATAACAGTAAAGCTGCTCAATCATACTGT
ATTCTTGATTGCATATTTCACGAGTCTGATGAGACTTATTATGTCATTGACGGTGTTTGT
TGGGCGGGAATTTCATTATATGAGTGCACTGCCGAATTCAGATTCTTTTGGTTAAACAGC
AAGCTTGCTGAGACGGGGGCTTGTGATGTTCCCTCAGCTTATCATAAATATAAATTTAGT
GCTCTTCCTGTCTACAACTGTGACAAAGAAGGACTACAGACAGCTTATGCAGGACAAGTT
CCATATGTCAAGGATGGATTACTTTTTTACAATAAGCATGCACAATATCAAACAGGAAAT
ACACCTCTATCATTGGTTTGGAAGGATGAACATTGTAGTCAGTATGTCATTGATACAGAC
AATAAAGGACAAGTTCAAAGTCAACAACAGCTAGTTTTGGAGCTCCTGGATGATGGCAGA
CTGGCTACATCTGATGACCCTCCTGTCATATTTGGTTGCTTACTTGGTGAATTCATGCAA
AAGACAGCACTTCACCGTGGAGATCTTATAAAATTTGCTATAGGTGAAGGAGGATTAGTT
GTTGTTGACAGTAAACTGGAGAAGGCTGATCTAAAATACCTGGGCAAATCCAATCGTGCA
CGTGCTTTTGCTGATAGTTACTCGAAGGTCTTGTTCCAGCACGCAGCTCGGTATTCTCCT
CTGAGAATTGAGTATCTTTTTGCATCAATCAGTTCGTATGTTGAAGGTGGAAATTCAACT
CAAGATGCAGAGATGGCTGGTTAA

Peptide Sequence

PEP ID

Solyc08g083260.3.1
PEP Infomation

snurportin-1 protein (AHRD V3.3 *** AT4G24880.1)
Sequence

MSSHDIRRPFKRPAISDQQRRRELSLLRQSQNRHDAQLQARRLASTVLSLQSDYNSSSQE
QQVDLEVTDELESCPEEVEDDYGHHKDAHDLRQATKLRGPDARLWFAKQLMLPEWMIDVP
DKLNTDWYVFARPAGKRCFVVSSNGTTISRLRNGVLLHRFPSALPNGARTNNSKAAQSYC
ILDCIFHESDETYYVIDGVCWAGISLYECTAEFRFFWLNSKLAETGACDVPSAYHKYKFS
ALPVYNCDKEGLQTAYAGQVPYVKDGLLFYNKHAQYQTGNTPLSLVWKDEHCSQYVIDTD
NKGQVQSQQQLVLELLDDGRLATSDDPPVIFGCLLGEFMQKTALHRGDLIKFAIGEGGLV
VVDSKLEKADLKYLGKSNRARAFADSYSKVLFQHAARYSPLRIEYLFASISSYVEGGNST
QDAEMAG*

Transcript Sequence

Transcript ID

Solyc08g083260.3.1
Transcript Infomation

snurportin-1 protein (AHRD V3.3 *** AT4G24880.1)
Sequence

ATTTTTGGAATAGAAGAGAATTCGCTGCAAAGTTTAAACATTGCCAGAATTCCAAACTTT
AGCGTCATACAGGATGAGTTCACACGACATACGCCGTCCATTTAAACGCCCGGCGATCTC
CGACCAACAAAGACGACGAGAACTTTCATTGCTCCGCCAGTCCCAAAACCGCCACGACGC
TCAGCTACAAGCCCGTCGTTTAGCTTCCACTGTCCTCTCTCTTCAATCTGACTACAACTC
CTCTTCCCAAGAACAGCAGGTCGACTTAGAAGTTACAGACGAACTTGAATCCTGTCCCGA
AGAAGTCGAAGACGATTATGGACATCATAAGGACGCACATGATCTTCGTCAAGCTACCAA
GCTGAGAGGACCTGACGCTCGGTTATGGTTTGCCAAGCAGCTTATGCTTCCTGAGTGGAT
GATTGATGTTCCCGATAAATTGAATACCGATTGGTATGTATTTGCTAGGCCTGCTGGAAA
ACGATGTTTCGTTGTTTCTTCAAATGGAACAACAATCAGTAGACTGCGCAATGGAGTTCT
CTTGCACCGTTTTCCTTCTGCTCTACCCAATGGTGCCAGGACTAATAACAGTAAAGCTGC
TCAATCATACTGTATTCTTGATTGCATATTTCACGAGTCTGATGAGACTTATTATGTCAT
TGACGGTGTTTGTTGGGCGGGAATTTCATTATATGAGTGCACTGCCGAATTCAGATTCTT
TTGGTTAAACAGCAAGCTTGCTGAGACGGGGGCTTGTGATGTTCCCTCAGCTTATCATAA
ATATAAATTTAGTGCTCTTCCTGTCTACAACTGTGACAAAGAAGGACTACAGACAGCTTA
TGCAGGACAAGTTCCATATGTCAAGGATGGATTACTTTTTTACAATAAGCATGCACAATA
TCAAACAGGAAATACACCTCTATCATTGGTTTGGAAGGATGAACATTGTAGTCAGTATGT
CATTGATACAGACAATAAAGGACAAGTTCAAAGTCAACAACAGCTAGTTTTGGAGCTCCT
GGATGATGGCAGACTGGCTACATCTGATGACCCTCCTGTCATATTTGGTTGCTTACTTGG
TGAATTCATGCAAAAGACAGCACTTCACCGTGGAGATCTTATAAAATTTGCTATAGGTGA
AGGAGGATTAGTTGTTGTTGACAGTAAACTGGAGAAGGCTGATCTAAAATACCTGGGCAA
ATCCAATCGTGCACGTGCTTTTGCTGATAGTTACTCGAAGGTCTTGTTCCAGCACGCAGC
TCGGTATTCTCCTCTGAGAATTGAGTATCTTTTTGCATCAATCAGTTCGTATGTTGAAGG
TGGAAATTCAACTCAAGATGCAGAGATGGCTGGTTAAAGGCCCACAGCTTAACTTTTGCT
CCGGTGTCCAACAATTCATCATTGACGTAATATTGTTCAAACAGGGCTGAAATTATATTA
AGGCAGTGTTGAAGGTAACATCAGTGGATAAAAAAGAAATGCACATGGCTTTCCTGTTTA
TTCTTTGCATAATTAGTCTGCTACAGAATTTTTCGGAATTTGCTATTGTTTCTTTGTGAA
CTGCTCCAATTCTTTTTCCAATTTTTTCCCTGAGAAGGAGATTATCAGTCCCAGGTGAGA
TAGCTGCGTCTAATTTCTGATTTTGGGATAGATTTTAGAGCATCACATGAGAGCTCGAAA
ACTGTATTCAGTCATGAGTGAAAATAGATTTGCTAAAACCAAAGAAAATGTACATTATGG
CTTCTTGTATTGTATTGGAACCAATTTCAACAAATTCTGTAGCTGAATTCTTTTCCCTAG
TATACATGTACAGTTTGATTTAAGATGCAAAAGTGGTTGGCTCACAACCATCGTGAACAC
AAGCTAAGACGTCTTTATAGTCTCTTGAGATGGTGAAAGAATCATAAACTTTGCCGTCCC
TACTCTTTTTGTATTCAAAAAGTAGTGATGAA