Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g083030.3.1
CDS Infomation	P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT4G27680.1)
Sequence	ATGGCGGGAAGCAGTAGTGGGAAGCTGATACAAGACCTTATATTGTGCGCTGCAAGCGCA GCATTAAGCATGGCTGTGTTCTTTGTTGGGCTTCGTCATCTCGACCCGAATCGCGAAGCT TCTAAGAAAGCTATTGAATCCCGCAAACACCTCTCCAAACGCTTAGGTCGCACTCTTATT TACACCACTCCCTATGAGGATATGATAACTGGGGATGTTGTGAATCCAGACCACATAGAT GTGGAATTTGATTCGATTGGGGGGCTGGATGGTATTAAGGAAACTTTGTTTCAGCTGGCC ATTTTACCTCTGCGAAGGCCGGAATTGTTTTGTCATGGAAAATTGCTTGGTCCAATGAAA GGGGTTCTATTGTATGGACCACCTGGGACAGGGAAGACGATGCTTGCTAAAGCCATTGCC AAAGAGTCTGGTGCTGTGTTCATAAATGTCAAAGTTTCTACTCTAATGAGCAAGTGGTTT GGTGACGCCCAAAAGCTCGTTGCTGCTGTTTTTAGCTTGGCCTACAAGCTCCAGCCAGCT ATAATATTCATTGATGAAGTTGACAGTTTTTTGGGCCAGCGTCGTTCAACAGAGAATGAA ATGCTGACTAGCATGAAAACTGAGTTCATGGCTTTATGGGATGGTTTTACTACTGATCAG AATGCTAGAGTAATGGTCCTGGCAGCAACCAATCGCCCAAGTGACCTTGATGAGGCAATA ATTAGACGCTTTTCTCAGGCATGTGAGATTGGAAAACCTTCTCTTAGTGATAGAACAAAG ATTCTGAAGGTAGTTTTGAAGGGTGAGAGAATCGAAGATAACATTGATTTTGATAGACTT GCTGGCTTGTGTGAGGGATACACTGGTTCAGACATTCTTGAAGCCTGCAAGCAAGCTGCC TTTATTCCTCTTGGGGAGTATTTGCAAGATGAGAAGAAAGCAGAGCAATCACAGGCACCA AGACCATTGTCTCAGTCTGATATAGAGAGAGCAGTGGCTGAATCAAAGAGGACCAGGGTT TCTGCTAAGAAACCAACTATTGTGAGCTTTCGGTTGGATGATTATGAGGATTTAGACTGA

Peptide Sequence

PEP ID	Solyc08g083030.3.1
PEP Infomation	P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT4G27680.1)
Sequence	MAGSSSGKLIQDLILCAASAALSMAVFFVGLRHLDPNREASKKAIESRKHLSKRLGRTLI YTTPYEDMITGDVVNPDHIDVEFDSIGGLDGIKETLFQLAILPLRRPELFCHGKLLGPMK GVLLYGPPGTGKTMLAKAIAKESGAVFINVKVSTLMSKWFGDAQKLVAAVFSLAYKLQPA IIFIDEVDSFLGQRRSTENEMLTSMKTEFMALWDGFTTDQNARVMVLAATNRPSDLDEAI IRRFSQACEIGKPSLSDRTKILKVVLKGERIEDNIDFDRLAGLCEGYTGSDILEACKQAA FIPLGEYLQDEKKAEQSQAPRPLSQSDIERAVAESKRTRVSAKKPTIVSFRLDDYEDLD*

Transcript Sequence

Transcript ID	Solyc08g083030.3.1
Transcript Infomation	P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT4G27680.1)
Sequence	ATGGCGGGAAGCAGTAGTGGGAAGCTGATACAAGACCTTATATTGTGCGCTGCAAGCGCA GCATTAAGCATGGCTGTGTTCTTTGTTGGGCTTCGTCATCTCGACCCGAATCGCGAAGCT TCTAAGAAAGCTATTGAATCCCGCAAACACCTCTCCAAACGCTTAGGTCGCACTCTTATT TACACCACTCCCTATGAGGATATGATAACTGGGGATGTTGTGAATCCAGACCACATAGAT GTGGAATTTGATTCGATTGGGGGGCTGGATGGTATTAAGGAAACTTTGTTTCAGCTGGCC ATTTTACCTCTGCGAAGGCCGGAATTGTTTTGTCATGGAAAATTGCTTGGTCCAATGAAA GGGGTTCTATTGTATGGACCACCTGGGACAGGGAAGACGATGCTTGCTAAAGCCATTGCC AAAGAGTCTGGTGCTGTGTTCATAAATGTCAAAGTTTCTACTCTAATGAGCAAGTGGTTT GGTGACGCCCAAAAGCTCGTTGCTGCTGTTTTTAGCTTGGCCTACAAGCTCCAGCCAGCT ATAATATTCATTGATGAAGTTGACAGTTTTTTGGGCCAGCGTCGTTCAACAGAGAATGAA ATGCTGACTAGCATGAAAACTGAGTTCATGGCTTTATGGGATGGTTTTACTACTGATCAG AATGCTAGAGTAATGGTCCTGGCAGCAACCAATCGCCCAAGTGACCTTGATGAGGCAATA ATTAGACGCTTTTCTCAGGCATGTGAGATTGGAAAACCTTCTCTTAGTGATAGAACAAAG ATTCTGAAGGTAGTTTTGAAGGGTGAGAGAATCGAAGATAACATTGATTTTGATAGACTT GCTGGCTTGTGTGAGGGATACACTGGTTCAGACATTCTTGAAGCCTGCAAGCAAGCTGCC TTTATTCCTCTTGGGGAGTATTTGCAAGATGAGAAGAAAGCAGAGCAATCACAGGCACCA AGACCATTGTCTCAGTCTGATATAGAGAGAGCAGTGGCTGAATCAAAGAGGACCAGGGTT TCTGCTAAGAAACCAACTATTGTGAGCTTTCGGTTGGATGATTATGAGGATTTAGACTGA GACTGGCTCCAGTTGATGACACACTTGACATCCGTTGAAGATATCATTCTTTAGGCGTGG CCCAGCCCTTTTTGAATCTCAATGCTCTAACCTGTTTAGGAATTGGAAGATATATAGGTC ATTTAACTTGCATTGTTTCAATGTTGTAAATACCATGAACAAGTAAGTAGTCATTGTTAC AAGGTTCAGTTTAAATTTCTCCTCCACGAGCGTTTAGCTGCAGCACACTCATGTGGACGC ATCCCCATAGTTTTTTTGAAGACTATATCATGTAATATTGTTTGTTATTATAAAGGAATT GTCTTTGGAAATACCCCAATCATAGCTATTCCAGATAACTTGAATGACAGAAAGATACTC GAAGTGCAGCTTTATCCCTTCTGAAACTAGTCTCCTGTGACTGACCTGACAATATTTTAC TGAATTTATGGATAATTGCAGTGAATGGCGCTTTTCAAGTATAATTCTATCTAAGCAATT GTTAGAGAGTTAATTTACTGGGTCTCTGTATATACACTCAGAAGTAATAAATAGGCAACA AGATGTTTAGCTTTTATCCGTCTCTGAAATTGATCTATCAATGGGAAAAGGGCTCAAAAT CCTCAGCTTAAAGCATAAATCCAGGCCAACTCCAGCAAAAAGGAAGATCAAAAGATTCTC CGAGACATAGACTGCGCCATCAAGAGCATGGGACCAGAAGCTGGCTGCATCCAACTCCAA TGGTGGTCCACCTCCAAGTGTAGCAAGGCCTGCATTGAATGCAATAGAATCTTTTTAACC TTAAAAAAACAAATTATCGCAGAAACTCGTTTTGGAAAGAACAGGATCATATGTACAGAC AAAAAATCCAGAATACTTCAATTTATCCCAAGGTAGTAAGATGGATGGAACTGAATATGT GTGCATCGATAGCAACGAAACAAGCATCCAAACTCAGCAAGGAATAACCTTGAGATTATT GTTTCTCAGCACATTGAACCCGCAATCTAGCCAATCAATTACTACGCCAATTGAACCCTT CATTTTGGTATGTATGCCTTGCGTAGCCCCATAATGAACCCTTGATGCTATAAAATCCTC AAGACTTTGACCTACTCCTTCCTATTCCAAAAAATTACACAAGAATATGGAAGGAGAAAG GCGACACATTACAATACCTAGCATGAGAGTATAATACCTTTGACAACGCCAAATGCTGCA GATGTTCCTGACTTGAGTTGAAAATTATCGAAGTCTCTTCTTACAGCATAGCGGAAGGTT ACACCAAACAAAGCACAACTAATAAATGTGATTGACAGAGGGAGTATTAGCTCAGAACTG CTGGAGATACGACTTAAGAAAATGGGAAGTCCTGCAAGTGTGCCAACAATTGCAGAAAGT GAAGCTGCTTTTACGGATTCTACTCTTTCCTCATCTCTATTCACTACATCTCCGTCTGTT GGATCTCTCTTTCTAGCATCACCACTAACGTTGAGGGAACGCTCAGCTTCTTCAATCATT GCTCTTGCTTCTAAAATATCTTTCTGGCATTCTGCAATCTTCAATTGCATCAACCAATCA GTACCTTAACTATTAGAGAGGACAAAAAGTTGATCAAGAAAAGCTCCAATGACGTCTTTA GAACATCTGAAATACTAAGAACAATGTAATCATTCTTGAGACGTTTGGACACTTGAAGCA CCCTCCTTTTGTAAGGTGCTAAAACATT