Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g082620.3.1
CDS Infomation

3-oxoacyl-[acyl-carrier-protein] synthase (AHRD V3.3 *** O82520_CAPCH)
Sequence

ATGAGTAGTATTACTTATTCTAATTTGATATTGAAGAGGAGAGAATCAAGAATCAATGGT
GGATCTCATTTACAATATAATGGACTTAGAGCTATTGAAACTGTGAAATTGACAGCAAAC
TCTGCTTCTTGTAAGCCAAAAGCTGTAAAATGTGGAAGAATCAGAGCCATGGCCTCTCCA
GCTGTTTCAGCTCCCAAGAGAGAGACAGACCCGAAGAAAAGGGTTGTCATAACCGGAATG
GGACTTGTTTCAGTCTTTGGAAGTGATATCGACAATTTTTACAACAAACTTCTTGAAGGG
CAGAGTGGAATCAGTTTAATAGACTCTTTTGATGCCTCAAGTTACCCAGTTAGGTTCGCG
GGACAGATTCGTGATTTCTCTTCCGAAGGTTACATAGACGGAAAGAATGATCGTCGTTTA
GATAACTGCTGGAGATACTGTCTCGTTGCTGGAAAGAGAGCCCTTGACGATGCTAACCTT
GGCCAACAAGTTCTTGAAACTATGGACAAAACGAGGATCGGTGTCTTGGTTGGGTCGGGG
ATGGGAGGTTTAAATGTTTTCAGTGACGGGGTGGAAGCGTTGTTGCAAAGAGGATACAAG
AAAGTTAGTCCATTTTTCATTCCTTACTCTATCACCAACATGGGATCAGCATTGTTGGCT
ATAGAAACCGGACTAATGGGACCGAATTACTCTATTTCAACGGCTTGTGCATCTGCCAAT
CACAGCTTTTGCGCAGCTGCGAATCATATAAGAAGGGGTGATGCAGATATTATGGTAACA
GGTGGAACGGAAGCTGGTGTTACAGCTACTGGTGTTGGTGGCTTCATAGCTTGTCGGGCC
TTGTCTCAAAGAAATGATGATTATGAAAAGGCTTCAAGGCCATGGGACACGAATCGTGAT
GGATTTGTCGTTGGTGAAGGCTCTGGTATCCTGGTCATGGAAAGTTTGGAGCACGCGTTG
AAAAGAGGTGCTAGTATCATCGCAGAGTACTTGGGAGGAGCAGCTACTTGTGATGCTCAT
CACATGACCGATCCTCGGCCTGATGGACTTGGAGTTTGGTCTTGCATTACTAAGGGTTTG
TTAGATGCCAGAATTTCTCCAGAAGAGGTGAACTATATAAATGCTCATGCAACATCAACT
CTTGCTGGAGATTTGGCTGAGGTCAATGCCATCAAGAAGGTCTTCAAAGATACCTCGGAA
ATCAAAATGAACGGGACAAAGTCGATGATCGGTCATGGACTTGGGGCTGCTGGTGGAATT
GAAGCCATTGTAACCATCAAAGCAATCACAACAGGATGGCTTCATCCAACCATCAATCAA
CATGAATTAGAACCCCAGGTCACGATTGACACCGTTCCAAATGTGAAGAAACAACATGAA
GTGAACGTTGGTATCTCCAACTCGTTCGGATTCGGAGGACATAATTCAGTGGTTGTTTTT
GCACCTTACAGGCCTTGA

Peptide Sequence

PEP ID

Solyc08g082620.3.1
PEP Infomation

3-oxoacyl-[acyl-carrier-protein] synthase (AHRD V3.3 *** O82520_CAPCH)
Sequence

MSSITYSNLILKRRESRINGGSHLQYNGLRAIETVKLTANSASCKPKAVKCGRIRAMASP
AVSAPKRETDPKKRVVITGMGLVSVFGSDIDNFYNKLLEGQSGISLIDSFDASSYPVRFA
GQIRDFSSEGYIDGKNDRRLDNCWRYCLVAGKRALDDANLGQQVLETMDKTRIGVLVGSG
MGGLNVFSDGVEALLQRGYKKVSPFFIPYSITNMGSALLAIETGLMGPNYSISTACASAN
HSFCAAANHIRRGDADIMVTGGTEAGVTATGVGGFIACRALSQRNDDYEKASRPWDTNRD
GFVVGEGSGILVMESLEHALKRGASIIAEYLGGAATCDAHHMTDPRPDGLGVWSCITKGL
LDARISPEEVNYINAHATSTLAGDLAEVNAIKKVFKDTSEIKMNGTKSMIGHGLGAAGGI
EAIVTIKAITTGWLHPTINQHELEPQVTIDTVPNVKKQHEVNVGISNSFGFGGHNSVVVF
APYRP*

Transcript Sequence

Transcript ID

Solyc08g082620.3.1
Transcript Infomation

3-oxoacyl-[acyl-carrier-protein] synthase (AHRD V3.3 *** O82520_CAPCH)
Sequence

ATAAAAGGAAGTACTCATTGTTTGGTTATATGACTGTAAACAAGTACACCAAACAACCCT
TTAATGTCACATTTCTTGTTTGGTCTTGTGAATTTAAGTCTGCAACTGTCACAAAAATCA
TACTACTATATTAATGTGTTGCATTTATCGCCATTTTTTTAATACTGTTTTCTTGCTTAG
CAAATATTACTATACTTGGGCGGATTCTCCAAATCCCATGTGCAATTAAAATTACAAACT
TTGTTATTTACTCCATTTTCTTGGATCTCTCTATGACTTGTCTTTTTCTAATTTTCTATA
TATTTACCAACATGTTATGTTGAATTAAAAGAAGAAAAAAAACAAGAAGATTTAGTTTTT
TTTATTTTTGTGTGTGTGTGTTTGAGAAAATGAGTAGTATTACTTATTCTAATTTGATAT
TGAAGAGGAGAGAATCAAGAATCAATGGTGGATCTCATTTACAATATAATGGACTTAGAG
CTATTGAAACTGTGAAATTGACAGCAAACTCTGCTTCTTGTAAGCCAAAAGCTGTAAAAT
GTGGAAGAATCAGAGCCATGGCCTCTCCAGCTGTTTCAGCTCCCAAGAGAGAGACAGACC
CGAAGAAAAGGGTTGTCATAACCGGAATGGGACTTGTTTCAGTCTTTGGAAGTGATATCG
ACAATTTTTACAACAAACTTCTTGAAGGGCAGAGTGGAATCAGTTTAATAGACTCTTTTG
ATGCCTCAAGTTACCCAGTTAGGTTCGCGGGACAGATTCGTGATTTCTCTTCCGAAGGTT
ACATAGACGGAAAGAATGATCGTCGTTTAGATAACTGCTGGAGATACTGTCTCGTTGCTG
GAAAGAGAGCCCTTGACGATGCTAACCTTGGCCAACAAGTTCTTGAAACTATGGACAAAA
CGAGGATCGGTGTCTTGGTTGGGTCGGGGATGGGAGGTTTAAATGTTTTCAGTGACGGGG
TGGAAGCGTTGTTGCAAAGAGGATACAAGAAAGTTAGTCCATTTTTCATTCCTTACTCTA
TCACCAACATGGGATCAGCATTGTTGGCTATAGAAACCGGACTAATGGGACCGAATTACT
CTATTTCAACGGCTTGTGCATCTGCCAATCACAGCTTTTGCGCAGCTGCGAATCATATAA
GAAGGGGTGATGCAGATATTATGGTAACAGGTGGAACGGAAGCTGGTGTTACAGCTACTG
GTGTTGGTGGCTTCATAGCTTGTCGGGCCTTGTCTCAAAGAAATGATGATTATGAAAAGG
CTTCAAGGCCATGGGACACGAATCGTGATGGATTTGTCGTTGGTGAAGGCTCTGGTATCC
TGGTCATGGAAAGTTTGGAGCACGCGTTGAAAAGAGGTGCTAGTATCATCGCAGAGTACT
TGGGAGGAGCAGCTACTTGTGATGCTCATCACATGACCGATCCTCGGCCTGATGGACTTG
GAGTTTGGTCTTGCATTACTAAGGGTTTGTTAGATGCCAGAATTTCTCCAGAAGAGGTGA
ACTATATAAATGCTCATGCAACATCAACTCTTGCTGGAGATTTGGCTGAGGTCAATGCCA
TCAAGAAGGTCTTCAAAGATACCTCGGAAATCAAAATGAACGGGACAAAGTCGATGATCG
GTCATGGACTTGGGGCTGCTGGTGGAATTGAAGCCATTGTAACCATCAAAGCAATCACAA
CAGGATGGCTTCATCCAACCATCAATCAACATGAATTAGAACCCCAGGTCACGATTGACA
CCGTTCCAAATGTGAAGAAACAACATGAAGTGAACGTTGGTATCTCCAACTCGTTCGGAT
TCGGAGGACATAATTCAGTGGTTGTTTTTGCACCTTACAGGCCTTGAACAAAAGTTTAAG
ACAAACTGTTCGGAGAAGTTCATAATTTTATTTAAAATGTAAGCTATGAAATTAAAATTT
TAGATAGATTGGTTTGTCTTTTTTACCCACAGCAAATGTCAGATGGATGAATAAGAAATT
ATTTCATCTTGTTAAAAATTATGTCTTTATCAATAAACTTCTCGATCATAATAATCGGTC
GACACAA