Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g082540.3.1
CDS Infomation

Galactose-binding protein (AHRD V3.3 *** AT4G23950.1)
Sequence

ATGAAGAAACCTCGTAACATCGTATACAACGATGTAGTCTCCAAACCTCAGCTGTCTTTG
CGGCTCTTCGTTTCTATTTTCTGTGCCATTCTGCTTTTCTATTCTATGTTCGTTTATGGA
TATGGAGGGATTTCTCTTGCCTATGCTGAGACTATTACCAATTATAGTGTTAAAGATATA
GAGTTCAACAGCTCCACTCAACCACTTTTAGAAAGCGGAGGGAAGAGTAGCAAAACTGAA
ATGCTATTGGAACTCAACATATCAGTTAAGATTAATGATTCTTGTAGTCCTACGGATAAC
ATTGCAACCCCTGAGCATTCACTGCAGAAAACAAGTGCATTGGAAGATGCAGTTTCAACT
ATTTTAGGTTACAATATGTTAATATGCCAAATGCAGCCACAAGTAGTGCATATCCATCGG
AATGAAGGTCGAATACTCAATGGAAGAAGTCACTTGACCTATCCAAATCTGGAAGAATTC
AGAAGCATTACAAAACAAGAAAAGAGAGGGAGCACCGCAAGTCAGTTAGTAAATATCACC
CACAGGCTTGAGCCTGATGGTACGCCTTACAATTATGCCTCGTCATCCAAGGGTGCTAAA
GTGGTGGCCCATAATAAAGAAGCAAAAGGAGCAAACAACGTACTGAACAAGGATCATGAT
AAGTATCTCAGAAACCCTTGTTCTGTGGCCGGGAAATTCTTTGTTATTGAGTTTGCAGAT
GAAACTCTAGTTGATGCAGTCAAAATTGCAAATTTTGAGCATTATTCATCTATGCTAAAA
GAATTTGAGTTATCAGGGAGTTTGGTATATCCAACTGAGACGTGGAATCCACTGGGAACT
TTTGTTGCTGAAAATGTCAAGCATGCTCAGTGTTTTAAGCTACCTGAACCAAAATGGGTT
AGATACTTGAAGCTAAATTTACTCACACATTATGGCTCTGAATTTTATTGTACTATCAGT
TTTATCGAGGTATATGGTATTGATGCCATAGAGCAGATGCTTGAGGATCTCATCGTCCAT
TCCCCCGAGTCTTCTCCTGATAAAATGGGAAATCTTAACAAGACTACTATGCTGTCTATG
ATACCAGATTCAGGTTCTGACTACCATGAAACAAAGGATGTCGTCCAAAATGTGGTTGAG
TCTGCAAACCAGGGGCTAGAAAATTTTGATGAAGGGCAAGGTATTAATTTAGATGCAACA
AGGAAAAAACAAACCATAACCAATAGTCCTGAGTTTATAAAAACGCATAGGCAGCAATCA
AATGGCAGAACTCATGGCGATGCAGTCCTAAAAATACTGCTGCAAAAGGTGAGAGCACTT
GAGTTGAACTTATCTGTCCTGGAGCAGTACATTAAAGAGCTGAGCAAGAGGCAAGGTGAC
ATTCTGCCTGAGCTAGATAATGAAATTTCTCAAGTTTCAGATCTCCTAGAGAAAAGCAAA
TTAGAGATCAAGGATCTTCTGAAATGGAAAGAGAATACGGAGAAAGAACATAGTGATCTT
GAATCTTGGAAAGCTTCTGTCTCAGCTCAATTGGATTTATTGGTCAACGGAAATCGCATG
CTAAGATTAGACGTCGAAAAGGTTGTGAATGACCAAAAGAGTTTGGAAAACAAAGAGTTG
GCTATGTTTTCAATCAGCTTGTCTTTTGCATGTATTGCTATTCTTAAGTTTGTTTCAAAT
AGATTCGCGACATGCCGAGGTTGGCTGTTGATTCTTGTTAGCAGCAGTTTGATTGCATGT
GTCCCATTGTTTTATAGTTAA

Peptide Sequence

PEP ID

Solyc08g082540.3.1
PEP Infomation

Galactose-binding protein (AHRD V3.3 *** AT4G23950.1)
Sequence

MKKPRNIVYNDVVSKPQLSLRLFVSIFCAILLFYSMFVYGYGGISLAYAETITNYSVKDI
EFNSSTQPLLESGGKSSKTEMLLELNISVKINDSCSPTDNIATPEHSLQKTSALEDAVST
ILGYNMLICQMQPQVVHIHRNEGRILNGRSHLTYPNLEEFRSITKQEKRGSTASQLVNIT
HRLEPDGTPYNYASSSKGAKVVAHNKEAKGANNVLNKDHDKYLRNPCSVAGKFFVIEFAD
ETLVDAVKIANFEHYSSMLKEFELSGSLVYPTETWNPLGTFVAENVKHAQCFKLPEPKWV
RYLKLNLLTHYGSEFYCTISFIEVYGIDAIEQMLEDLIVHSPESSPDKMGNLNKTTMLSM
IPDSGSDYHETKDVVQNVVESANQGLENFDEGQGINLDATRKKQTITNSPEFIKTHRQQS
NGRTHGDAVLKILLQKVRALELNLSVLEQYIKELSKRQGDILPELDNEISQVSDLLEKSK
LEIKDLLKWKENTEKEHSDLESWKASVSAQLDLLVNGNRMLRLDVEKVVNDQKSLENKEL
AMFSISLSFACIAILKFVSNRFATCRGWLLILVSSSLIACVPLFYS*

Transcript Sequence

Transcript ID

Solyc08g082540.3.1
Transcript Infomation

Galactose-binding protein (AHRD V3.3 *** AT4G23950.1)
Sequence

CGTATCGTTTTCTGAAATTAAATTAAAAATCACGCAAAGTGATAAAAAAAAGAAGAAGTT
TCTGCTTGTTGGGGAATTCAATACATTTGTTCTCCACGAATAAAAAAATCACAAAAACTC
ATTAAAAAAACCACAAAAACAAGATTTCCTTTTTCTTCATCTTCTTCCATTTTCCTCTGA
TCAAAACTCAATAAAACCCAAAAAAAAAAAAGAAAAAAAAAAGAGTATACTCTATGCAAT
CGGCTCTCAATTGTGAAATTTAGTATTGAGAAGAGATGAAGAAACCTCGTAACATCGTAT
ACAACGATGTAGTCTCCAAACCTCAGCTGTCTTTGCGGCTCTTCGTTTCTATTTTCTGTG
CCATTCTGCTTTTCTATTCTATGTTCGTTTATGGATATGGAGGGATTTCTCTTGCCTATG
CTGAGACTATTACCAATTATAGTGTTAAAGATATAGAGTTCAACAGCTCCACTCAACCAC
TTTTAGAAAGCGGAGGGAAGAGTAGCAAAACTGAAATGCTATTGGAACTCAACATATCAG
TTAAGATTAATGATTCTTGTAGTCCTACGGATAACATTGCAACCCCTGAGCATTCACTGC
AGAAAACAAGTGCATTGGAAGATGCAGTTTCAACTATTTTAGGTTACAATATGTTAATAT
GCCAAATGCAGCCACAAGTAGTGCATATCCATCGGAATGAAGGTCGAATACTCAATGGAA
GAAGTCACTTGACCTATCCAAATCTGGAAGAATTCAGAAGCATTACAAAACAAGAAAAGA
GAGGGAGCACCGCAAGTCAGTTAGTAAATATCACCCACAGGCTTGAGCCTGATGGTACGC
CTTACAATTATGCCTCGTCATCCAAGGGTGCTAAAGTGGTGGCCCATAATAAAGAAGCAA
AAGGAGCAAACAACGTACTGAACAAGGATCATGATAAGTATCTCAGAAACCCTTGTTCTG
TGGCCGGGAAATTCTTTGTTATTGAGTTTGCAGATGAAACTCTAGTTGATGCAGTCAAAA
TTGCAAATTTTGAGCATTATTCATCTATGCTAAAAGAATTTGAGTTATCAGGGAGTTTGG
TATATCCAACTGAGACGTGGAATCCACTGGGAACTTTTGTTGCTGAAAATGTCAAGCATG
CTCAGTGTTTTAAGCTACCTGAACCAAAATGGGTTAGATACTTGAAGCTAAATTTACTCA
CACATTATGGCTCTGAATTTTATTGTACTATCAGTTTTATCGAGGTATATGGTATTGATG
CCATAGAGCAGATGCTTGAGGATCTCATCGTCCATTCCCCCGAGTCTTCTCCTGATAAAA
TGGGAAATCTTAACAAGACTACTATGCTGTCTATGATACCAGATTCAGGTTCTGACTACC
ATGAAACAAAGGATGTCGTCCAAAATGTGGTTGAGTCTGCAAACCAGGGGCTAGAAAATT
TTGATGAAGGGCAAGGTATTAATTTAGATGCAACAAGGAAAAAACAAACCATAACCAATA
GTCCTGAGTTTATAAAAACGCATAGGCAGCAATCAAATGGCAGAACTCATGGCGATGCAG
TCCTAAAAATACTGCTGCAAAAGGTGAGAGCACTTGAGTTGAACTTATCTGTCCTGGAGC
AGTACATTAAAGAGCTGAGCAAGAGGCAAGGTGACATTCTGCCTGAGCTAGATAATGAAA
TTTCTCAAGTTTCAGATCTCCTAGAGAAAAGCAAATTAGAGATCAAGGATCTTCTGAAAT
GGAAAGAGAATACGGAGAAAGAACATAGTGATCTTGAATCTTGGAAAGCTTCTGTCTCAG
CTCAATTGGATTTATTGGTCAACGGAAATCGCATGCTAAGATTAGACGTCGAAAAGGTTG
TGAATGACCAAAAGAGTTTGGAAAACAAAGAGTTGGCTATGTTTTCAATCAGCTTGTCTT
TTGCATGTATTGCTATTCTTAAGTTTGTTTCAAATAGATTCGCGACATGCCGAGGTTGGC
TGTTGATTCTTGTTAGCAGCAGTTTGATTGCATGTGTCCCATTGTTTTATAGTTAAACTA
GATGGGCAGACCCGTGCCAGCACGTATATTTGTGTACTGTTGAAAAAAATGACTTGGAGT
TTTGATTCATCTACACTTGAATCAAAAGCATTTTAATTATCATTACATCATATAAAAAAA
GGAATTTTGTAATCACTGTAGTTCCGGTAAATTAAAGAAGAACTCAAAAACTAAATAAAT
CTTCAATAGTTGATGCAAAGAAAACCCCA