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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g082470.1.1
CDS Infomation

LOW QUALITY:Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** AT4G23930.1)
Sequence

ATGGTTAAATCTCGTAAACCTCCAAGTGGACGTACAAATTTAGCTTCATGTATAGTTGCA
ACAATTTTCTTAATCTTCATCTTCATCATCATCTTCATCCTTTACTTCACTCTTTTCAAA
CCTAAATCCCCCATTATCACCGTTAACTCCATTCAGCTTCCCTCTTTCTCCGCCTCGAAC
GGCACCGTGAACTTCACATTTTCTCAATACGTCTCAATCGAAAACCCAAATCACGATGAA
TTTGCTCACTATGACAGTTCCCTGCAGTTACTTTATTCGGGTAATCGAATCGGGTTCATG
TTTGTACCCGCCGGAAAAATTAATTCGGGTCGGACTCAGTATATGGCGGCGACGTTTTCG
GTGAAGGCGTTTCCGTTAACGGTGAATGGACAACCGGAGAGTGTGGGTGGGCCGACGGTG
ACGGATGGGCTGAGTGGGTTTCGGGTCGGATCTAGTATGGAAGTGGAGTCGAGATTGGAA
ATGGCGGGTCGGGTTAGAATGCTCCATTTTTTTACACATCATGTGGAGAGTAAAGCTGAA
TGTAGAATTGATATTTCTGTCAGTGATGGATCTGTTACGGCTTTCCACTGTTAG

Peptide Sequence

PEP ID

Solyc08g082470.1.1
PEP Infomation

LOW QUALITY:Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** AT4G23930.1)
Sequence

MVKSRKPPSGRTNLASCIVATIFLIFIFIIIFILYFTLFKPKSPIITVNSIQLPSFSASN
GTVNFTFSQYVSIENPNHDEFAHYDSSLQLLYSGNRIGFMFVPAGKINSGRTQYMAATFS
VKAFPLTVNGQPESVGGPTVTDGLSGFRVGSSMEVESRLEMAGRVRMLHFFTHHVESKAE
CRIDISVSDGSVTAFHC*

Transcript Sequence

Transcript ID

Solyc08g082470.1.1
Transcript Infomation

LOW QUALITY:Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (AHRD V3.3 *** AT4G23930.1)
Sequence

ATGGTTAAATCTCGTAAACCTCCAAGTGGACGTACAAATTTAGCTTCATGTATAGTTGCA
ACAATTTTCTTAATCTTCATCTTCATCATCATCTTCATCCTTTACTTCACTCTTTTCAAA
CCTAAATCCCCCATTATCACCGTTAACTCCATTCAGCTTCCCTCTTTCTCCGCCTCGAAC
GGCACCGTGAACTTCACATTTTCTCAATACGTCTCAATCGAAAACCCAAATCACGATGAA
TTTGCTCACTATGACAGTTCCCTGCAGTTACTTTATTCGGGTAATCGAATCGGGTTCATG
TTTGTACCCGCCGGAAAAATTAATTCGGGTCGGACTCAGTATATGGCGGCGACGTTTTCG
GTGAAGGCGTTTCCGTTAACGGTGAATGGACAACCGGAGAGTGTGGGTGGGCCGACGGTG
ACGGATGGGCTGAGTGGGTTTCGGGTCGGATCTAGTATGGAAGTGGAGTCGAGATTGGAA
ATGGCGGGTCGGGTTAGAATGCTCCATTTTTTTACACATCATGTGGAGAGTAAAGCTGAA
TGTAGAATTGATATTTCTGTCAGTGATGGATCTGTTACGGCTTTCCACTGTTAG