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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g081570.3.1
CDS Infomation

2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (AHRD V3.3 *** K4CPF3_SOLLC)
Sequence

ATGCCACTTGTCTTCGAAAAGATTGGAATTTTCCCTTCAATTTACACAAGTTCTTTGAGA
TTCTCCACCAAACTGAGCTCGATTCCAGTGGCTATGGCGTCTTCACTATTTTTTTCAACT
CCAATTCCAACCAAACTAATCTCAAAGCAAAAACCCTTTTCTCATCACTCTTCAAATCCT
CTTTTGCCCCAATCAACAATCAAACCCTTGAGGAGTTTGGTGGTTTCTTCTGCAGCTGCA
ATTGAAGCTGAAACAGAAACATCTAGCTCGAATTCCACTCCGTTGAAGTCTCTTCCTTTT
AGAGTCGGCCATGGATTTGACCTTCATCGATTGGAACCTGGTTATCCTTTGATTATTGGT
GGGATTAATATTCCTCATGATAGAGGCTGTGAAGCTCACTCTGATGGTGACGTTTTGCTT
CACTGTGTTGTTGATGCAATTTTGGGAGCTCTGGGGCTTCCTGATATTGGGCAGATTTTC
CCTGACACTGACCCTAAATGGAAGGGTGCGCCTTCTTCGGTGTTCATGGAAGAAGCTGTG
CGTCTAATGCATGAAGCAGGTTATGAATTGGGAAACCTAGACGCCACTTTGATTTTACAA
AGACCAAAAGTGAGCCCACACAAGGAGTCTATTAGAGCCAACTTGTGTAAGCTGCTTGGT
GCTGATCCTTCTGTTGTAAACCTGAAAGCAAAGACTCATGAGAAAGTTGACAGTCTCGGT
GAGAACAGAAGTATCGCGGCTCATACTGTTGTTCTTCTTATGAAGAAATAG

Peptide Sequence

PEP ID

Solyc08g081570.3.1
PEP Infomation

2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (AHRD V3.3 *** K4CPF3_SOLLC)
Sequence

MPLVFEKIGIFPSIYTSSLRFSTKLSSIPVAMASSLFFSTPIPTKLISKQKPFSHHSSNP
LLPQSTIKPLRSLVVSSAAAIEAETETSSSNSTPLKSLPFRVGHGFDLHRLEPGYPLIIG
GINIPHDRGCEAHSDGDVLLHCVVDAILGALGLPDIGQIFPDTDPKWKGAPSSVFMEEAV
RLMHEAGYELGNLDATLILQRPKVSPHKESIRANLCKLLGADPSVVNLKAKTHEKVDSLG
ENRSIAAHTVVLLMKK*

Transcript Sequence

Transcript ID

Solyc08g081570.3.1
Transcript Infomation

2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (AHRD V3.3 *** K4CPF3_SOLLC)
Sequence

ATAATTAGTTTGAATATCTAAATAAAATATTGGGACTAGAATGCCACTTGTCTTCGAAAA
GATTGGAATTTTCCCTTCAATTTACACAAGTTCTTTGAGATTCTCCACCAAACTGAGCTC
GATTCCAGTGGCTATGGCGTCTTCACTATTTTTTTCAACTCCAATTCCAACCAAACTAAT
CTCAAAGCAAAAACCCTTTTCTCATCACTCTTCAAATCCTCTTTTGCCCCAATCAACAAT
CAAACCCTTGAGGAGTTTGGTGGTTTCTTCTGCAGCTGCAATTGAAGCTGAAACAGAAAC
ATCTAGCTCGAATTCCACTCCGTTGAAGTCTCTTCCTTTTAGAGTCGGCCATGGATTTGA
CCTTCATCGATTGGAACCTGGTTATCCTTTGATTATTGGTGGGATTAATATTCCTCATGA
TAGAGGCTGTGAAGCTCACTCTGATGGTGACGTTTTGCTTCACTGTGTTGTTGATGCAAT
TTTGGGAGCTCTGGGGCTTCCTGATATTGGGCAGATTTTCCCTGACACTGACCCTAAATG
GAAGGGTGCGCCTTCTTCGGTGTTCATGGAAGAAGCTGTGCGTCTAATGCATGAAGCAGG
TTATGAATTGGGAAACCTAGACGCCACTTTGATTTTACAAAGACCAAAAGTGAGCCCACA
CAAGGAGTCTATTAGAGCCAACTTGTGTAAGCTGCTTGGTGCTGATCCTTCTGTTGTAAA
CCTGAAAGCAAAGACTCATGAGAAAGTTGACAGTCTCGGTGAGAACAGAAGTATCGCGGC
TCATACTGTTGTTCTTCTTATGAAGAAATAGTGAATAGAGTTTGTCGATTTGTTGTATAA
AATGTGGTTACTGTAGCATTTTGAAGCCATTTAGAGAGCACATCATGTTGATCTTCTTGG
TCATGGATATTTTCAGAACTTTAGAGTCAAACAATAATAATCCCAAAATTTGGAATTTCA
TCACCTTATTAATTTTCTCCATTTTGTTCATATATATTATAGCAGTTGGTC