Plant GARDEN How To ▶︎

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Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g081480.3.1

CDS Infomation

Pectin lyase-like superfamily protein (AHRD V3.3 *** AT4G23500.1)

Sequence

ATGGAGTTTCCACTTAGCACTCTCTCACACATTCCTGCAATTCGCCGAGTTTTACTACTC
GCCGTGGTGATTCTAGCGGCGTTCGGTAACGTTCACGGCCGGCATAGAGTACACAAATGG
GAAACCGTAGAGTACCCTGCCATAAGTTGCAGAGCACACACTGCATCGTTGACGGATTTC
GGTGGAGTCGGCGACGGCAAGACGTTGAATACTGACGCTTTTCGAACGGCGGTTGATCAC
CTGAGTCAGTTTCAATCGGACGGCGGTTCAATGCTGTATGTACCTGCCGGAAAATGGCTG
ACGGGGAGTTTCAATTTGACCAGCCATTTTACTCTGTATCTCGACAAAGACGCCGTTCTT
CTCGCCTCTCAGGATGAAAATGATTATCCTGTGATTGCACCATTGCCATCCTACGGACGA
GGAAGGGATACAGAGGGAGGCAGATTCATTAGTCTTATTTTTGGATCCAACCTCACTGAT
GTTGTCATCACAGGTGAAAATGGAACCATTGATGGGCAAGGGCAGCTATGGTGGGACAAA
TTCCACAACGGAGAACTTAAATTTACAAGGCCTTACCTGATAGAAATCATGTACTCTGAT
AATATTCAGATCTCCAGTCTTACTTTGGTTAATTCTCCTTCATGGAATGTTCATCCTGTA
TATTGCAGCAACGTTATCATCCAAGGCATCACTATCCTTGCACCAGTCAGATCTCCAAAT
ACTGATGGCATTAATCCTGATTCTTGCATAAATACTAGAATAGAAGACTGTTACATTATC
TCCGGAGATGATTGTATTGCTGTTAAGAGTGGTTGGGACGAGTATGGAGTCGCCTTTGGG
ATGCCAACAAAGCAGCTAGCTATAAGGCGAATCACCTGCATTTCTCCAACCAGTGCAACA
ATTGCATTAGGCAGTGAGATGTCAGGAGGAATTCAAGATGTAAGAGCAGAGGACATTGTA
GCAATCAATACAGAATCAGCGGTTCGAATCAAGACTGCAGTAGGAAGAGGTGGATACGTG
AAAGATATATATGTTAGAGGCGTGACAATGAAAACAATGAAATACGTATTCTGGATGACA
GGAGATTATGGTTCTCATCCAGACGACAACTATGATCCCAACGCGTTACCTGTGATTGAA
AACATCAATTACCGCGATATGGTTGCTGAGAACGTGACCATTGCTGCCAAGCTTGCAGGA
ATTTCTGGTGATCCGTTTACTGGAATCTGCATATCAAATGTCACGATAGAGATGGCGCCT
AAAGCAAAGAAACTTTTCTGGAATTGTACAGATATTTCCGGAATTTCAAGTGGTGTGGTA
CCTCAGCCTTGTGATTTGTTGCCAGATCAAGGGATGGAGTATGCTTCACCCTGTAATTTT
CCAACAGAGAGCTTACCAATTGATGATATGGAAATTCGGACGTGTTCCTGCAGGAAGAAA
ATATATAACTAA

Peptide Sequence

PEP ID

Solyc08g081480.3.1

PEP Infomation

Pectin lyase-like superfamily protein (AHRD V3.3 *** AT4G23500.1)

Sequence

MEFPLSTLSHIPAIRRVLLLAVVILAAFGNVHGRHRVHKWETVEYPAISCRAHTASLTDF
GGVGDGKTLNTDAFRTAVDHLSQFQSDGGSMLYVPAGKWLTGSFNLTSHFTLYLDKDAVL
LASQDENDYPVIAPLPSYGRGRDTEGGRFISLIFGSNLTDVVITGENGTIDGQGQLWWDK
FHNGELKFTRPYLIEIMYSDNIQISSLTLVNSPSWNVHPVYCSNVIIQGITILAPVRSPN
TDGINPDSCINTRIEDCYIISGDDCIAVKSGWDEYGVAFGMPTKQLAIRRITCISPTSAT
IALGSEMSGGIQDVRAEDIVAINTESAVRIKTAVGRGGYVKDIYVRGVTMKTMKYVFWMT
GDYGSHPDDNYDPNALPVIENINYRDMVAENVTIAAKLAGISGDPFTGICISNVTIEMAP
KAKKLFWNCTDISGISSGVVPQPCDLLPDQGMEYASPCNFPTESLPIDDMEIRTCSCRKK
IYN*

Transcript Sequence

Transcript ID

Solyc08g081480.3.1

Transcript Infomation

Pectin lyase-like superfamily protein (AHRD V3.3 *** AT4G23500.1)

Sequence

TTAAAAGTTAAAACGGTTTTGTATATATACGTCTGACAAATCCGTGAAGCCTACTTACAT
AATAATGGAGTTTCCACTTAGCACTCTCTCACACATTCCTGCAATTCGCCGAGTTTTACT
ACTCGCCGTGGTGATTCTAGCGGCGTTCGGTAACGTTCACGGCCGGCATAGAGTACACAA
ATGGGAAACCGTAGAGTACCCTGCCATAAGTTGCAGAGCACACACTGCATCGTTGACGGA
TTTCGGTGGAGTCGGCGACGGCAAGACGTTGAATACTGACGCTTTTCGAACGGCGGTTGA
TCACCTGAGTCAGTTTCAATCGGACGGCGGTTCAATGCTGTATGTACCTGCCGGAAAATG
GCTGACGGGGAGTTTCAATTTGACCAGCCATTTTACTCTGTATCTCGACAAAGACGCCGT
TCTTCTCGCCTCTCAGGATGAAAATGATTATCCTGTGATTGCACCATTGCCATCCTACGG
ACGAGGAAGGGATACAGAGGGAGGCAGATTCATTAGTCTTATTTTTGGATCCAACCTCAC
TGATGTTGTCATCACAGGTGAAAATGGAACCATTGATGGGCAAGGGCAGCTATGGTGGGA
CAAATTCCACAACGGAGAACTTAAATTTACAAGGCCTTACCTGATAGAAATCATGTACTC
TGATAATATTCAGATCTCCAGTCTTACTTTGGTTAATTCTCCTTCATGGAATGTTCATCC
TGTATATTGCAGCAACGTTATCATCCAAGGCATCACTATCCTTGCACCAGTCAGATCTCC
AAATACTGATGGCATTAATCCTGATTCTTGCATAAATACTAGAATAGAAGACTGTTACAT
TATCTCCGGAGATGATTGTATTGCTGTTAAGAGTGGTTGGGACGAGTATGGAGTCGCCTT
TGGGATGCCAACAAAGCAGCTAGCTATAAGGCGAATCACCTGCATTTCTCCAACCAGTGC
AACAATTGCATTAGGCAGTGAGATGTCAGGAGGAATTCAAGATGTAAGAGCAGAGGACAT
TGTAGCAATCAATACAGAATCAGCGGTTCGAATCAAGACTGCAGTAGGAAGAGGTGGATA
CGTGAAAGATATATATGTTAGAGGCGTGACAATGAAAACAATGAAATACGTATTCTGGAT
GACAGGAGATTATGGTTCTCATCCAGACGACAACTATGATCCCAACGCGTTACCTGTGAT
TGAAAACATCAATTACCGCGATATGGTTGCTGAGAACGTGACCATTGCTGCCAAGCTTGC
AGGAATTTCTGGTGATCCGTTTACTGGAATCTGCATATCAAATGTCACGATAGAGATGGC
GCCTAAAGCAAAGAAACTTTTCTGGAATTGTACAGATATTTCCGGAATTTCAAGTGGTGT
GGTACCTCAGCCTTGTGATTTGTTGCCAGATCAAGGGATGGAGTATGCTTCACCCTGTAA
TTTTCCAACAGAGAGCTTACCAATTGATGATATGGAAATTCGGACGTGTTCCTGCAGGAA
GAAAATATATAACTAATACATCAATGTAATAAGAATTTGTTCAGAAGGAAGACGATATCA
TACCCACTTTAATTATTCTGTTGCTTCACACTCCGAACAGTCCATGAATATACACTGGTA
ATCCCTGTTCACTGTGTGGACGAGACATGCTAATATCTGTAACTGTTTATGAATTTACGC
AGCCAATATTTCAAGATAAAAGTAAAGCAAAAAGATTGTTGGTGAATGCATATTGAAC