Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g081340.3.1
CDS Infomation	DNA repair helicase XPB1-like protein (AHRD V3.3 *** AT5G41370.1)
Sequence	ATGGGTCATCACGGACACGGTGATAAAAGTCGACCCAGCAAGAAGATCAAGTTTGCTTCT AAGGAGGAGTATCGGGCTTCAACTGCTGATGATGATCACTACTACCCTGAAGAAGGCGGT GATGATTTTCATGATGGTGAGAGGGAAGGGAAGAAGATGGATTTCACTAAACTGGAACTC AAACCCGATCATGGCAATCGTCCATTGTGGGCTTGCGCAGATGGTAGAATTTTCCTTGAG ACGTTCTCTCCATTATATAAGCAAGCCTATGATTTCCTCATTGCTATTGCTGAGCCTGTT TGCAGGCCGGAGTCGATGCATGAGTACAACTTGACGCCTCACTCATTGTATGCAGCTGTG TCAGTTGGTCTTGAGACTGAAACTATAATAGCTGTTCTTAGCAAATTGTCAAAGACCAAG CTTCCAAAAGAGATGATTGATTTTATTCATGCTTCTACTGCTAACTACGGAAAAGTCAAG CTTGTACTTAAGAAGAATCGGTATTTTATAGAATCTCCATTTCCAGAGGTTTTGAAAAGA TTGCTCGCGGATGATGCCATAGGAAAGGCTAGGATTTCTTCTGAGGGGATGCATGGAAAG GATGGGTTTACTGTAAGCAAACCCGTGAATGAAATTGAAGGTGGACATGATGAATTGATA AATGAAGTGGACGTGGCTGCTGCGGCTGAAGAAAAAGAAACTCATTCATTTGAAATAGAC CCTGCTCAGGTTGAAAATGTGAAGCAGCGGTGTCTACCAAATGCTTTAAATTATCCTATG ATGGAGGAGTATGACTTCAGGAATGATACAGTTAATCCTGATCTTGATATGGAGTTGAAG CCTCAAGCACAGCCACGACCTTATCAAGAGAAGAGTCTTAGTAAGATGTTTGGAAATGGA AGAGCAAGATCTGGAATTATTGTGCTACCTTGTGGTGCCGGGAAGTCCTTAGTAGGTGTT TCTGCAGCAAGCAGAATAAAAAAGAGCTGTCTTTGTTTAGCAACAAATGCTGTGTCTGTG GATCAATGGGCTTTCCAGTTTAAGTTGTGGTCTACTATCCGAGAAGAGCAGATATGTCGT TTCACATCTGACAGCAAAGAAAGATTCCGTGGAAATGTTGGTGTGGTGGTGACGACATAT AACATGGTTGCTTTTGGTGGCAAACGTTCTGAAGAATCTGAGAAGATCATTGAAGAAATA AGAAATAGAGAATGGGGTTTGCTCCTCATGGATGAGGTGCACGTGGTTCCTGCACATATG TTTAGAAAGGTCATTAGTATCACAAAATCGCACTGCAAACTTGGGCTTACTGCTACACTT GTCAGAGAAGACGAGAGGATTACGGATTTGAACTTTCTAATTGGTCCCAAGTTGTATGAG GCAAATTGGTTGGATTTAGTTAAAGGGGGATTTATTGCAAATGTACAATGTGCTGAGGTG TGGTGTCCTATGACGAAGGAATTCTTTGCTGAATATTTGAAAAAAGAGAATTCAAAGAAG CGACAAGCACTTTATGTGATGAACCCAAACAAGTTCAGGGCTTGTGAGTTCCTTATCCGC TTTCATGAACAGCAGCGTGGGGACAAGATCATTGTCTTCGCCGACAATCTTTTTGCACTT ACCGAGTATGCAATGAAGCTTCGGAAACCTATGATCTATGGTGCTACCAGCCATGTTGAA AGAACAAAAATTCTTGAGGCATTTAAAACTAGCAAGGAAGTTAACACCATATTCCTTTCC AAGGTGGGTGATAACTCCATCGATATTCCTGAGGCGAATGTTATCATACAAATTTCGTCA CACGCTGGTTCAAGAAGGCAGGAAGCTCAGCGTCTAGGGCGTATTCTCAGGGCCAAGGGA AAGCATCAAGATAGGATGGCAGGAGGTAAAGAGGAGTATAATGCATTCTTTTACTCTCTC GTGTCAACAGATACCCAGGAAATGTATTACTCAACCAAAAGACAGCAGTTCTTGATCGAT CAAGGTTATAGCTTTAAGGTGATCACAAGTTTACCACCTTCTGATTCTGGGTCCGAGTTG TCTTACCATCGTCTTGATGAACAGCTTCAACTTCTTGGAAAGGTACTGAGTGCTGGCGAT GATGCAGTAGGTTTGGAGCAACTAGATGAAGATGCAGATGACGTAGCTCTTCAAAAAGCC CGTCGCTATGTGGGTTCTATGAGTGCCATGTCAGGAGCTAAAGGGATGGTTTATATGGAG TACAACTCTGGAAAGAAGGGGCTTATCAAAAACAAGCCTAAAGATCCAACCAAGAGACAT CAATTATTCAAGAAACGATTTGGTTGA

Peptide Sequence

PEP ID	Solyc08g081340.3.1
PEP Infomation	DNA repair helicase XPB1-like protein (AHRD V3.3 *** AT5G41370.1)
Sequence	MGHHGHGDKSRPSKKIKFASKEEYRASTADDDHYYPEEGGDDFHDGEREGKKMDFTKLEL KPDHGNRPLWACADGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAV SVGLETETIIAVLSKLSKTKLPKEMIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKR LLADDAIGKARISSEGMHGKDGFTVSKPVNEIEGGHDELINEVDVAAAAEEKETHSFEID PAQVENVKQRCLPNALNYPMMEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNG RARSGIIVLPCGAGKSLVGVSAASRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICR FTSDSKERFRGNVGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHM FRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEV WCPMTKEFFAEYLKKENSKKRQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFAL TEYAMKLRKPMIYGATSHVERTKILEAFKTSKEVNTIFLSKVGDNSIDIPEANVIIQISS HAGSRRQEAQRLGRILRAKGKHQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLID QGYSFKVITSLPPSDSGSELSYHRLDEQLQLLGKVLSAGDDAVGLEQLDEDADDVALQKA RRYVGSMSAMSGAKGMVYMEYNSGKKGLIKNKPKDPTKRHQLFKKRFG*

Transcript Sequence

Transcript ID	Solyc08g081340.3.1
Transcript Infomation	DNA repair helicase XPB1-like protein (AHRD V3.3 *** AT5G41370.1)
Sequence	CTGTAGAGCAACCAGAATTAGTAAGTATTTGCCGATTTGCCTCAAAACCGCCATTCGAAG AGACTGATAAACAAACCGAAAGAGAGAACAGAGAAACTCTCAAAGCTCAAATTTGGGATT CAATAAACAGACTTTGCATCATCTCATAAATGGGTCATCACGGACACGGTGATAAAAGTC GACCCAGCAAGAAGATCAAGTTTGCTTCTAAGGAGGAGTATCGGGCTTCAACTGCTGATG ATGATCACTACTACCCTGAAGAAGGCGGTGATGATTTTCATGATGGTGAGAGGGAAGGGA AGAAGATGGATTTCACTAAACTGGAACTCAAACCCGATCATGGCAATCGTCCATTGTGGG CTTGCGCAGATGGTAGAATTTTCCTTGAGACGTTCTCTCCATTATATAAGCAAGCCTATG ATTTCCTCATTGCTATTGCTGAGCCTGTTTGCAGGCCGGAGTCGATGCATGAGTACAACT TGACGCCTCACTCATTGTATGCAGCTGTGTCAGTTGGTCTTGAGACTGAAACTATAATAG CTGTTCTTAGCAAATTGTCAAAGACCAAGCTTCCAAAAGAGATGATTGATTTTATTCATG CTTCTACTGCTAACTACGGAAAAGTCAAGCTTGTACTTAAGAAGAATCGGTATTTTATAG AATCTCCATTTCCAGAGGTTTTGAAAAGATTGCTCGCGGATGATGCCATAGGAAAGGCTA GGATTTCTTCTGAGGGGATGCATGGAAAGGATGGGTTTACTGTAAGCAAACCCGTGAATG AAATTGAAGGTGGACATGATGAATTGATAAATGAAGTGGACGTGGCTGCTGCGGCTGAAG AAAAAGAAACTCATTCATTTGAAATAGACCCTGCTCAGGTTGAAAATGTGAAGCAGCGGT GTCTACCAAATGCTTTAAATTATCCTATGATGGAGGAGTATGACTTCAGGAATGATACAG TTAATCCTGATCTTGATATGGAGTTGAAGCCTCAAGCACAGCCACGACCTTATCAAGAGA AGAGTCTTAGTAAGATGTTTGGAAATGGAAGAGCAAGATCTGGAATTATTGTGCTACCTT GTGGTGCCGGGAAGTCCTTAGTAGGTGTTTCTGCAGCAAGCAGAATAAAAAAGAGCTGTC TTTGTTTAGCAACAAATGCTGTGTCTGTGGATCAATGGGCTTTCCAGTTTAAGTTGTGGT CTACTATCCGAGAAGAGCAGATATGTCGTTTCACATCTGACAGCAAAGAAAGATTCCGTG GAAATGTTGGTGTGGTGGTGACGACATATAACATGGTTGCTTTTGGTGGCAAACGTTCTG AAGAATCTGAGAAGATCATTGAAGAAATAAGAAATAGAGAATGGGGTTTGCTCCTCATGG ATGAGGTGCACGTGGTTCCTGCACATATGTTTAGAAAGGTCATTAGTATCACAAAATCGC ACTGCAAACTTGGGCTTACTGCTACACTTGTCAGAGAAGACGAGAGGATTACGGATTTGA ACTTTCTAATTGGTCCCAAGTTGTATGAGGCAAATTGGTTGGATTTAGTTAAAGGGGGAT TTATTGCAAATGTACAATGTGCTGAGGTGTGGTGTCCTATGACGAAGGAATTCTTTGCTG AATATTTGAAAAAAGAGAATTCAAAGAAGCGACAAGCACTTTATGTGATGAACCCAAACA AGTTCAGGGCTTGTGAGTTCCTTATCCGCTTTCATGAACAGCAGCGTGGGGACAAGATCA TTGTCTTCGCCGACAATCTTTTTGCACTTACCGAGTATGCAATGAAGCTTCGGAAACCTA TGATCTATGGTGCTACCAGCCATGTTGAAAGAACAAAAATTCTTGAGGCATTTAAAACTA GCAAGGAAGTTAACACCATATTCCTTTCCAAGGTGGGTGATAACTCCATCGATATTCCTG AGGCGAATGTTATCATACAAATTTCGTCACACGCTGGTTCAAGAAGGCAGGAAGCTCAGC GTCTAGGGCGTATTCTCAGGGCCAAGGGAAAGCATCAAGATAGGATGGCAGGAGGTAAAG AGGAGTATAATGCATTCTTTTACTCTCTCGTGTCAACAGATACCCAGGAAATGTATTACT CAACCAAAAGACAGCAGTTCTTGATCGATCAAGGTTATAGCTTTAAGGTGATCACAAGTT TACCACCTTCTGATTCTGGGTCCGAGTTGTCTTACCATCGTCTTGATGAACAGCTTCAAC TTCTTGGAAAGGTACTGAGTGCTGGCGATGATGCAGTAGGTTTGGAGCAACTAGATGAAG ATGCAGATGACGTAGCTCTTCAAAAAGCCCGTCGCTATGTGGGTTCTATGAGTGCCATGT CAGGAGCTAAAGGGATGGTTTATATGGAGTACAACTCTGGAAAGAAGGGGCTTATCAAAA ACAAGCCTAAAGATCCAACCAAGAGACATCAATTATTCAAGAAACGATTTGGTTGATTCA ACCCTAAAGTTGTACAAATATCTCTCTTTAGTGTTGTGTATCGTCTACAAAATTTTCTAG TAAGATTTTCAGCTTGCTTAGTTGTTTTTGTTATTTTATACAATGGTTTATATATTGTAA GGTAAATCAAAACCAGTGTGATTCATTAAGCAATTATCCCAACACGAGTTTTCTTTGCAG CGTAAATTCAAATTAATTAAATTGAGACTTCAAAATTGGTACT