Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g081280.3.1
CDS Infomation

CDK activating kinase (AHRD V3.3 *** A7M6H0_TOBAC)
Sequence

ATGTCTGAAGTGGAGAAATTGTTGTCTATGAATAGGAAAGCTGCAGATCGTTATCTGAAG
CGAGAAGTACTTGGTGAAGGTACTTATGGTGTTGTTTACAAGGCTATTGATACGAAGAGT
GGCCAGGTTGTTGCTATCAAGAAAATTCGTCTTGGGAAACAGAAGGAAGGGGTGAATTTT
ACTGCTCTGAGGGAAATCAAATTATTGAAAGAGCTGAAGGATCCCAGCGTTATCGAATTG
ATTGAGTGCTTCCCACACAAAGGAAACTTGCATCTTGTGTTTGAGTTCATGGAGACAGAT
CTTGAGGCTGTGATTCGTGATAGGAATATCTTCCTCTCACCTGCGGATATAAAATCTTAT
ATCCAGATGACATTAAAAGGTCTTGCTTTTTGTCACAAGAAATGGGTCTTGCATAGAGAT
ATGAAACCAAACAATTTACTGATTGGGCCTGATGGGCAGCTTAAGCTTGCTGACTTTGGA
TTAGCACGTATATTTGGTAGCCCTGACAGAAGATTCACACATCAGGTTTTTGCCCGGTGG
TACAGAGCACCGGAGTTATTGTTTGGTGCAAAGCAGTATGGACCTGGAGTAGATGTTTGG
GCCGCTGCATGTATCTTTGCAGAGCTTCTCCTGCGGCGACCATTTCTGCAGGGAAACAGT
GATATTGATCAGCTAGGGAAGATTTTTGCGGCTTTTGGGACCCCAAAGCCTTCACAGTGG
CATGATATGGTCTACTTGCCGGATTATGTTGAGTACCAATATGTCCCTGGACAGCCATTC
AAAACACTGTTTCCAACGGCTACTGATGATTGCCTGGATCTTCTGTCGAAGATGTTTACT
TACGATCCAAAAGCTAGGATCTCAGCGCAGCAAGCATTGGAGCATCGGTACTTCTCATCA
GGACCGCCACCTACGGAACCAGCTCTGCTTCCACGACCTCCCCCTAAGCGAGAGCCTGGA
AATCCTAAGGTGTCAGATCTCAATCCACATGATGGTCCTGTGGTATTGTCTCCACCAAGA
AAGTCAAGAAGAGTAATGCCTCATCGCGAAGGATTCGAGGCAAATATGCATCCAGAAAAG
ATGGATGACCATGAAAATGAGATCCAACAGGCTGCTGGTGAGAGGAGTGAACAAGTACCC
ATGTCACTGGATTTCTCAGTCTTTGGAATGAAACCACCTACTAGACCGACCATTAACAGC
GCTGACAGAACGCATTTGAAGAGGAAATTAGATCTGGAATTCCAACCCGAAGAGGAATAA

Peptide Sequence

PEP ID

Solyc08g081280.3.1
PEP Infomation

CDK activating kinase (AHRD V3.3 *** A7M6H0_TOBAC)
Sequence

MSEVEKLLSMNRKAADRYLKREVLGEGTYGVVYKAIDTKSGQVVAIKKIRLGKQKEGVNF
TALREIKLLKELKDPSVIELIECFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSY
IQMTLKGLAFCHKKWVLHRDMKPNNLLIGPDGQLKLADFGLARIFGSPDRRFTHQVFARW
YRAPELLFGAKQYGPGVDVWAAACIFAELLLRRPFLQGNSDIDQLGKIFAAFGTPKPSQW
HDMVYLPDYVEYQYVPGQPFKTLFPTATDDCLDLLSKMFTYDPKARISAQQALEHRYFSS
GPPPTEPALLPRPPPKREPGNPKVSDLNPHDGPVVLSPPRKSRRVMPHREGFEANMHPEK
MDDHENEIQQAAGERSEQVPMSLDFSVFGMKPPTRPTINSADRTHLKRKLDLEFQPEEE*

Transcript Sequence

Transcript ID

Solyc08g081280.3.1
Transcript Infomation

CDK activating kinase (AHRD V3.3 *** A7M6H0_TOBAC)
Sequence

AAAATATACAAATAAAATCATATACGCTCCTATTATTTTGTTTTTTTCCTTTATACACAT
TCAGTGAGACATTTGAACAAACACTTTGTTAGCAAATTGAGAAATCTCATAAACAACTTA
CCAATTTAATGGTATGTTGAGTGTATATATATACTTCGATTAGCTGTGTAGAACAGTTTA
GCAGTGCGGCGGATGCAAAACCCATAAAAATTTGGGAAAAAAATCGGAAGAAAAAGATGT
CTGAAGTGGAGAAATTGTTGTCTATGAATAGGAAAGCTGCAGATCGTTATCTGAAGCGAG
AAGTACTTGGTGAAGGTACTTATGGTGTTGTTTACAAGGCTATTGATACGAAGAGTGGCC
AGGTTGTTGCTATCAAGAAAATTCGTCTTGGGAAACAGAAGGAAGGGGTGAATTTTACTG
CTCTGAGGGAAATCAAATTATTGAAAGAGCTGAAGGATCCCAGCGTTATCGAATTGATTG
AGTGCTTCCCACACAAAGGAAACTTGCATCTTGTGTTTGAGTTCATGGAGACAGATCTTG
AGGCTGTGATTCGTGATAGGAATATCTTCCTCTCACCTGCGGATATAAAATCTTATATCC
AGATGACATTAAAAGGTCTTGCTTTTTGTCACAAGAAATGGGTCTTGCATAGAGATATGA
AACCAAACAATTTACTGATTGGGCCTGATGGGCAGCTTAAGCTTGCTGACTTTGGATTAG
CACGTATATTTGGTAGCCCTGACAGAAGATTCACACATCAGGTTTTTGCCCGGTGGTACA
GAGCACCGGAGTTATTGTTTGGTGCAAAGCAGTATGGACCTGGAGTAGATGTTTGGGCCG
CTGCATGTATCTTTGCAGAGCTTCTCCTGCGGCGACCATTTCTGCAGGGAAACAGTGATA
TTGATCAGCTAGGGAAGATTTTTGCGGCTTTTGGGACCCCAAAGCCTTCACAGTGGCATG
ATATGGTCTACTTGCCGGATTATGTTGAGTACCAATATGTCCCTGGACAGCCATTCAAAA
CACTGTTTCCAACGGCTACTGATGATTGCCTGGATCTTCTGTCGAAGATGTTTACTTACG
ATCCAAAAGCTAGGATCTCAGCGCAGCAAGCATTGGAGCATCGGTACTTCTCATCAGGAC
CGCCACCTACGGAACCAGCTCTGCTTCCACGACCTCCCCCTAAGCGAGAGCCTGGAAATC
CTAAGGTGTCAGATCTCAATCCACATGATGGTCCTGTGGTATTGTCTCCACCAAGAAAGT
CAAGAAGAGTAATGCCTCATCGCGAAGGATTCGAGGCAAATATGCATCCAGAAAAGATGG
ATGACCATGAAAATGAGATCCAACAGGCTGCTGGTGAGAGGAGTGAACAAGTACCCATGT
CACTGGATTTCTCAGTCTTTGGAATGAAACCACCTACTAGACCGACCATTAACAGCGCTG
ACAGAACGCATTTGAAGAGGAAATTAGATCTGGAATTCCAACCCGAAGAGGAATAACATA
TCTTTCTGATTATTTTTTTTCATCTGGATGAAGGCTGCTATATAGTTTAAGGCCATAATT
TTGGTGAACAAGGAGAAGAGTCTTTATTTCAGGTATACTGGTGGTACATTATTGCATCGA
ATGTGCCCTCCTTTACTTTGATAGTGCGATGATTGCCAATATAACGATTGATCTTGGAGA
AGTACGTTGAACCATGGCAATAAAGTTTACCTAGTTCATTCTTTATCGTCGAGAGGATGT
AATTGTAATGCGGGTATACCCAGTCTAGCATTCATATAAACTCAATTTTTTTTATATGCT
TTTTGTAGAGAGACATAATTGATTTTCGTCTGTTCGAGTTTATATCAAACTTGAGTTTGT
AAGACAATGCATTGCTTTTGGAATTGCTAGTTTTAATTTGGTGGATATTGTCTATGTAGA
GAAATCTTGAATTTTTACATTGCATTTTGATCACATTTTGGTAGTTATATATGAAAGTGA
AGTTTTTTAATCACCTTCGTTGTATTT