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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g080860.3.1
CDS Infomation

patatin-like phospholipase domain protein (AHRD V3.3 *** AT1G76980.1)
Sequence

ATGTTTGATCCAAGAAACCAAAAACCCATTGATCATATACACATTCTTGATCCAGTTACA
CCCTCAGATTACACTTGTAACAACAATAGTCCAAAAAATGATGTTGGAGGCCTAGAAATG
TCACAACAACATGTTGATGATTCTGGTATTTCTTCACCACCCTTGTGGAAAAATAGGCCA
TCAACAAGCCCTGATCACCCCTTTCATAATTCGACGAATCATCGATCAATTTCACCTAGC
TCTAGAGCGCTAGCTATAGCTAAAGGTCAATGGGAACTAATGGAAATGATCAAGAACATG
CCTGAATCATGTTATGAGTTGTCACTCAAGGATCTTGTTGAAAAAAATTCAATCTTGGAA
TCAAATCAAGAAGAATGTTTGATCAATAAAGAAGAGGAAAATTTCAGTACTAGCCAAGAA
CAAGTTGTGGTGCAAAGGGTGAAAAGTGGTAAAAAGAAGGGGAAAATGATTAGAAATGAA
AGTTTTGAAGAAAAGGGGTCTTTTTTGAAGATGTTTTTTCCAATTCCACCAAAAACAATT
AGTACTAAAGTTTCACCAAAGCCAGTTGAAGGTTCAAAAAGCTTGGAGAAAGATTGGTGG
AAGAAGAGATTTTCTTGTTCAAGTGAGAGTGATAGTAGCAAAACAGGAAGTAGTAATAGT
GAAAGCAGTGGTAGTAATGATAGCACAACAAGTACTCAAAGGAAAAAGAAAGGATTTTTA
ACCAATTTCTGGTCAAGATCATGTTTTAGTAAAAGCAAATCAGCAGAGTGA

Peptide Sequence

PEP ID

Solyc08g080860.3.1
PEP Infomation

patatin-like phospholipase domain protein (AHRD V3.3 *** AT1G76980.1)
Sequence

MFDPRNQKPIDHIHILDPVTPSDYTCNNNSPKNDVGGLEMSQQHVDDSGISSPPLWKNRP
STSPDHPFHNSTNHRSISPSSRALAIAKGQWELMEMIKNMPESCYELSLKDLVEKNSILE
SNQEECLINKEEENFSTSQEQVVVQRVKSGKKKGKMIRNESFEEKGSFLKMFFPIPPKTI
STKVSPKPVEGSKSLEKDWWKKRFSCSSESDSSKTGSSNSESSGSNDSTTSTQRKKKGFL
TNFWSRSCFSKSKSAE*

Transcript Sequence

Transcript ID

Solyc08g080860.3.1
Transcript Infomation

patatin-like phospholipase domain protein (AHRD V3.3 *** AT1G76980.1)
Sequence

CATGTCATTTTCATTCATTTAAGGTGCCTAACATACAAAAAGCAAGCCAATAAAAAACTT
TTTTTTTTTATATTGAAAAGCAAGTCACTACTAATATACATTTATGACTTCTACATACAC
ACATCAAACCACAAATTTTTTTCCCTCATCCCCCCACCCCCCTAAAATCCTCTCAATTTC
CAAACATGTTTGATCCAAGAAACCAAAAACCCATTGATCATATACACATTCTTGATCCAG
TTACACCCTCAGATTACACTTGTAACAACAATAGTCCAAAAAATGATGTTGGAGGCCTAG
AAATGTCACAACAACATGTTGATGATTCTGGTATTTCTTCACCACCCTTGTGGAAAAATA
GGCCATCAACAAGCCCTGATCACCCCTTTCATAATTCGACGAATCATCGATCAATTTCAC
CTAGCTCTAGAGCGCTAGCTATAGCTAAAGGTCAATGGGAACTAATGGAAATGATCAAGA
ACATGCCTGAATCATGTTATGAGTTGTCACTCAAGGATCTTGTTGAAAAAAATTCAATCT
TGGAATCAAATCAAGAAGAATGTTTGATCAATAAAGAAGAGGAAAATTTCAGTACTAGCC
AAGAACAAGTTGTGGTGCAAAGGGTGAAAAGTGGTAAAAAGAAGGGGAAAATGATTAGAA
ATGAAAGTTTTGAAGAAAAGGGGTCTTTTTTGAAGATGTTTTTTCCAATTCCACCAAAAA
CAATTAGTACTAAAGTTTCACCAAAGCCAGTTGAAGGTTCAAAAAGCTTGGAGAAAGATT
GGTGGAAGAAGAGATTTTCTTGTTCAAGTGAGAGTGATAGTAGCAAAACAGGAAGTAGTA
ATAGTGAAAGCAGTGGTAGTAATGATAGCACAACAAGTACTCAAAGGAAAAAGAAAGGAT
TTTTAACCAATTTCTGGTCAAGATCATGTTTTAGTAAAAGCAAATCAGCAGAGTGAAGAC
AAATTAAATATTGCCTCTCTTGTTTGGTTATGAATCCTGTAAAGCATTTATACTTACAAG
ACTCACAGATGATAAAAAAAAAAAAGTATATCCTGTAAAGATCTTTGATAAATAAAGATC
AGTCAGAGGGTGTTTCTTGAGTTTTTGTTGCAAAGTTTATTAGAGTTTTCCCCTTTGAAA
CGGGAGCGGTTACGTCTAAATACCTTTTCTTATTTTCGACATATTATGGTATCCTGAAAT
TGGTAGAAGCAAATCGTGTTTGTCTAAGAAAATTCTATTAGGATCTGATCTATTTACTCG
GCAATTCATCAACAGATTTATCTTGTTTGGTTTTGTTGTTTGGCAATTTATAGATGGATA
TATA