Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g080470.3.1
CDS Infomation

SUN-like protein 23
Sequence

ATGGGCAAAGCATCCAAATGGTTTAGAGGTCTTCTTGGCCTAAAAAAACAGGACCCATCA
TCTTCCTCTAACCAAAATCCAAAACCCACAAAGAAAAAATGGAGCTTTGTTAAATCTTAC
AGAGAAAAAGACTCTAACTTTGTAAAGGGAACTGATAAAGAATCATCAAACTATGGTCGG
GTTGTGTCGAATTCACTTCAAAACGGCGCTGTTGGGTGTAGTGTTGATTCGTCAAAGCGA
GCGATTGCGGTGGCGGAAGCAACCGCCGTTGTAGCGGAAGCTGCTATCGCCGCCGCTCAA
GCCGCGGCGGCGGTGGTGAAGCTTACTAATAGTGGTAGAGCTACTACTGCAACTAATGGC
GGTGCCGCTGCTGTTACGACGTGGAACGGCGTTTCTCTTACCTCCTCTGCGGTGGGTTGT
AAAAGAAAGGGAGTCGCCGCCGGCAACCGTGAAAATTGGGCCGCCGTTGTTATTCAATCA
CATTTCCGAGCTTATTTGTCGAGGAGAGCTTTACGCGCGTTAAAGGGACTGGTGAAGCTT
CAAGCACTGGTGAGAGGTCACATTATTAGGCGACAGACTGCTGATTATCTACGGCAAATG
CAAGCAATATCCAGAGCTCAGTCGAGGGCTCGTGCTGGACGATCTCAGGTCTCAGGATCC
CCTCATTCAAGCACTAAGTCTGTTCAATTTGTTCATGATCCTACAACTCCAGAGAAATTT
GAGCATGTTATCCGCGCAAGGAGCTTGAAGCATGATGAAACATCTGTGCTCAAGAGGAAT
ACCTCTAAATCAAATTGGAAGGTCATTGACTCGGAAAAGGCACGAATTAGACCTCAAGGA
TCTTCTGCAAGAACTAGTTCTATTGATGACGAAAAGAGTGACAAGATCCTCGAGATAGAT
ACCGGGAAACCATATGTTACGCCTAAACAAAGGAACCTCTTCCACTCCTCACATCTTTGC
TTGAACTCTGACCAATACAGCTATAGCTTAACAACGTCGAAGGAATCAACAGCTCATCAA
ACGGTTCCCAGTCCATCGTCCTGTGGAAATCAACCCCTTAGTCCCCTGAAGTTCAATGAA
GATCTTGATGAAGCTTGCTTCTGCACTGCTGACAATAGCCCTCAGTTTTACTCGGCTTCA
TCAAAGGGCGGTAGTTCAAAGAGAGGACCTTTTACACCAACTAAGAGCGACGGTTCAAGA
AGCTATATGAGTGGTTACTCTGATCATCCCAACTACATGTCCTACACAGAGTCCTCGAAG
GCCAAGGTACGTTCAATGAGCGCACCTAAACAAAGGCCTCACTATGAGAGATCAAGTTCA
ACAAAAAGGTACTCGATTCACGGGTACAGTGAGTCAAGAAACAACTCACAAAAGGGTTCT
TTTTATGCCAACTTCACTGGTAAAGCTTATCCTGGTTCTGGTCGATTGGACCGGCTTGGA
ATGCCTGTTATCAGGGCAGATCCATCTGGATTCAGTGGTGGTCTTCGACACAGATATTAA

Peptide Sequence

PEP ID

Solyc08g080470.3.1
PEP Infomation

SUN-like protein 23
Sequence

MGKASKWFRGLLGLKKQDPSSSSNQNPKPTKKKWSFVKSYREKDSNFVKGTDKESSNYGR
VVSNSLQNGAVGCSVDSSKRAIAVAEATAVVAEAAIAAAQAAAAVVKLTNSGRATTATNG
GAAAVTTWNGVSLTSSAVGCKRKGVAAGNRENWAAVVIQSHFRAYLSRRALRALKGLVKL
QALVRGHIIRRQTADYLRQMQAISRAQSRARAGRSQVSGSPHSSTKSVQFVHDPTTPEKF
EHVIRARSLKHDETSVLKRNTSKSNWKVIDSEKARIRPQGSSARTSSIDDEKSDKILEID
TGKPYVTPKQRNLFHSSHLCLNSDQYSYSLTTSKESTAHQTVPSPSSCGNQPLSPLKFNE
DLDEACFCTADNSPQFYSASSKGGSSKRGPFTPTKSDGSRSYMSGYSDHPNYMSYTESSK
AKVRSMSAPKQRPHYERSSSTKRYSIHGYSESRNNSQKGSFYANFTGKAYPGSGRLDRLG
MPVIRADPSGFSGGLRHRY*

Transcript Sequence

Transcript ID

Solyc08g080470.3.1
Transcript Infomation

SUN-like protein 23
Sequence

AAGTAGTAGTATTTTAGAACAAGAAGAAGCACATTATTTTTGACTTCTCTTCCATTTCAC
ACAAATCTCTCTTCTTCTTCTTCTCACTCGTTCACTTCCATTTCTCTGCAAACAGAACAA
AAAAAAATGTTTTTTTTCAATCCAATTTCTATATTTTAAATAAATGGGCAAAGCATCCAA
ATGGTTTAGAGGTCTTCTTGGCCTAAAAAAACAGGACCCATCATCTTCCTCTAACCAAAA
TCCAAAACCCACAAAGAAAAAATGGAGCTTTGTTAAATCTTACAGAGAAAAAGACTCTAA
CTTTGTAAAGGGAACTGATAAAGAATCATCAAACTATGGTCGGGTTGTGTCGAATTCACT
TCAAAACGGCGCTGTTGGGTGTAGTGTTGATTCGTCAAAGCGAGCGATTGCGGTGGCGGA
AGCAACCGCCGTTGTAGCGGAAGCTGCTATCGCCGCCGCTCAAGCCGCGGCGGCGGTGGT
GAAGCTTACTAATAGTGGTAGAGCTACTACTGCAACTAATGGCGGTGCCGCTGCTGTTAC
GACGTGGAACGGCGTTTCTCTTACCTCCTCTGCGGTGGGTTGTAAAAGAAAGGGAGTCGC
CGCCGGCAACCGTGAAAATTGGGCCGCCGTTGTTATTCAATCACATTTCCGAGCTTATTT
GTCGAGGAGAGCTTTACGCGCGTTAAAGGGACTGGTGAAGCTTCAAGCACTGGTGAGAGG
TCACATTATTAGGCGACAGACTGCTGATTATCTACGGCAAATGCAAGCAATATCCAGAGC
TCAGTCGAGGGCTCGTGCTGGACGATCTCAGGTCTCAGGATCCCCTCATTCAAGCACTAA
GTCTGTTCAATTTGTTCATGATCCTACAACTCCAGAGAAATTTGAGCATGTTATCCGCGC
AAGGAGCTTGAAGCATGATGAAACATCTGTGCTCAAGAGGAATACCTCTAAATCAAATTG
GAAGGTCATTGACTCGGAAAAGGCACGAATTAGACCTCAAGGATCTTCTGCAAGAACTAG
TTCTATTGATGACGAAAAGAGTGACAAGATCCTCGAGATAGATACCGGGAAACCATATGT
TACGCCTAAACAAAGGAACCTCTTCCACTCCTCACATCTTTGCTTGAACTCTGACCAATA
CAGCTATAGCTTAACAACGTCGAAGGAATCAACAGCTCATCAAACGGTTCCCAGTCCATC
GTCCTGTGGAAATCAACCCCTTAGTCCCCTGAAGTTCAATGAAGATCTTGATGAAGCTTG
CTTCTGCACTGCTGACAATAGCCCTCAGTTTTACTCGGCTTCATCAAAGGGCGGTAGTTC
AAAGAGAGGACCTTTTACACCAACTAAGAGCGACGGTTCAAGAAGCTATATGAGTGGTTA
CTCTGATCATCCCAACTACATGTCCTACACAGAGTCCTCGAAGGCCAAGGTACGTTCAAT
GAGCGCACCTAAACAAAGGCCTCACTATGAGAGATCAAGTTCAACAAAAAGGTACTCGAT
TCACGGGTACAGTGAGTCAAGAAACAACTCACAAAAGGGTTCTTTTTATGCCAACTTCAC
TGGTAAAGCTTATCCTGGTTCTGGTCGATTGGACCGGCTTGGAATGCCTGTTATCAGGGC
AGATCCATCTGGATTCAGTGGTGGTCTTCGACACAGATATTAAGCCAGATATTGTAATTG
AAAACTAACCAGATGTAACTAATTATGAATATCTAATGTCTTGTGTCAAGGCCATGGTGC
TAATGTGATGCATTTTATGTCTAGTTGGTAAACGAATGCAATCTCTTGGTTATGAAAAGT
ATTT