Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g080080.3.1
CDS Infomation

WD40 repeat-containing protein (AHRD V3.3 *** A0A103XFY3_CYNCS)
Sequence

ATGGAAAATTCTTCTGTAAATCCTCAAAATCCAATTTCTTCATCATCTGATCTAAATCCC
AAAACCCCATCAAGAACAAATCAGTTAATTCCGGGTTTCAATTCATATCATCCTTCACCT
TCTAGAACAATCTACAGTGATCGTTTCATTCCGAGTAGATCTTCGTCTAATTTTGCTCTT
TTTGACCTTCCTTTACCTCCACAATCATCTTCATCTGAGGATTCCACCAATGCCTATACT
GCACTACTTCGTTCAGCTCTGTTTGGAGCTGATTGTGGATCGGTGGTGCCGCCGGTGACA
CCGGATAAGTCGTTGGGTTTAAATGCAAGAAATTTACAGATTTGTAGACCCAATTGTAAT
ATTTTTCGGTATAAGACGGAGACCCGGCAATCATTGCAGTCATTGTCGCCGTTTGGGTTT
GAGGATCAGCTTCCGGGTTTTAGTCCTAGCCCGGTTAAAGCTAACCGGAAAGTTCCAAGA
TCGCCTTTTAAGGTGTTGGATGCGCCGGCATTGCAAGATGATTTTTACTTGAACCTCGTG
GACTGGTCGTCGCATAATGTGTTAGCTGTGGGGCTAGGGAGCTGTGTTTATCTATGGCAT
GCATCTAGTAGCAAGGTAGTGAAGTTGTGTGACCTAGGAATTGATGATAGTGTTAGTTCA
GTTGGTTGGGCACAACGGGGCACGCATCTAGCTGTTGGAACAAGTAATGGCAAAGTCCAG
TTATGGGATTCCTCGCGCTGTAAGAGGATAAGAACCATGGAGGGTCATCGATTACGAGTT
GGCGCACTTGCGTGGAGCTCATCCATGCTGTCTTCAGGAAGCCGAGACAAGAGTATTCTT
CAGCGTGATATACGTGCTCAAGAAGATTTTGTCAGTAAGCTGAGTGGTCATAAATCAGAG
GTTTGTGGGCTCAAATGGTCTTATGATAACCGTGAATTAGCTTCAGGTGGAAATGATAAT
CGGCTTTTTGTATGGAACAACCATTCAACACAACCTGTGCTGAAATACTGTGAGCATACT
GCTGCGGTTAAGGCCATTGCATGGTCCCCCCATCTCCATGGGCTTCTAGCATCCGGTGGA
GGCACAGCTGATCGATGCATTAGATTCTGGAACACCACCACTAATACACATCTCAGTTGC
ATGGACACTGGCAGTCAGGTCTGTAATCTTGTGTGGTCGAAGAATGTCAATGAATTAGTC
AGCACACATGGTTACTCTCAAAATCAGATAATAGTTTGGAGATATCCGACAATGTCTAAG
ATAGCTACTCTGACAGGTCATACATATAGAGTCTTATATCTTGCTATATCTCCAGATGGA
CAGACAATTGTCACTGGAGCAGGAGATGAAACACTTCGATTCTGGAATGTTTTCCCTTCT
CCCAAGTCAAAGAACACCGAGACTGAAATTGGTGCATCTTCGTTTGGTAGAACTCAGATC
AGGTGA

Peptide Sequence

PEP ID

Solyc08g080080.3.1
PEP Infomation

WD40 repeat-containing protein (AHRD V3.3 *** A0A103XFY3_CYNCS)
Sequence

MENSSVNPQNPISSSSDLNPKTPSRTNQLIPGFNSYHPSPSRTIYSDRFIPSRSSSNFAL
FDLPLPPQSSSSEDSTNAYTALLRSALFGADCGSVVPPVTPDKSLGLNARNLQICRPNCN
IFRYKTETRQSLQSLSPFGFEDQLPGFSPSPVKANRKVPRSPFKVLDAPALQDDFYLNLV
DWSSHNVLAVGLGSCVYLWHASSSKVVKLCDLGIDDSVSSVGWAQRGTHLAVGTSNGKVQ
LWDSSRCKRIRTMEGHRLRVGALAWSSSMLSSGSRDKSILQRDIRAQEDFVSKLSGHKSE
VCGLKWSYDNRELASGGNDNRLFVWNNHSTQPVLKYCEHTAAVKAIAWSPHLHGLLASGG
GTADRCIRFWNTTTNTHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSK
IATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSKNTETEIGASSFGRTQI
R*

Transcript Sequence

Transcript ID

Solyc08g080080.3.1
Transcript Infomation

WD40 repeat-containing protein (AHRD V3.3 *** A0A103XFY3_CYNCS)
Sequence

ATTTTCTTAACCTTTAGATCTCTTCATTTTTGTTCTTTCTTCTTTGTTTCTTCTTCCTTC
TTCCTTCTTTCTTCTTCGATCTACTATGGAAAATTCTTCTGTAAATCCTCAAAATCCAAT
TTCTTCATCATCTGATCTAAATCCCAAAACCCCATCAAGAACAAATCAGTTAATTCCGGG
TTTCAATTCATATCATCCTTCACCTTCTAGAACAATCTACAGTGATCGTTTCATTCCGAG
TAGATCTTCGTCTAATTTTGCTCTTTTTGACCTTCCTTTACCTCCACAATCATCTTCATC
TGAGGATTCCACCAATGCCTATACTGCACTACTTCGTTCAGCTCTGTTTGGAGCTGATTG
TGGATCGGTGGTGCCGCCGGTGACACCGGATAAGTCGTTGGGTTTAAATGCAAGAAATTT
ACAGATTTGTAGACCCAATTGTAATATTTTTCGGTATAAGACGGAGACCCGGCAATCATT
GCAGTCATTGTCGCCGTTTGGGTTTGAGGATCAGCTTCCGGGTTTTAGTCCTAGCCCGGT
TAAAGCTAACCGGAAAGTTCCAAGATCGCCTTTTAAGGTGTTGGATGCGCCGGCATTGCA
AGATGATTTTTACTTGAACCTCGTGGACTGGTCGTCGCATAATGTGTTAGCTGTGGGGCT
AGGGAGCTGTGTTTATCTATGGCATGCATCTAGTAGCAAGGTAGTGAAGTTGTGTGACCT
AGGAATTGATGATAGTGTTAGTTCAGTTGGTTGGGCACAACGGGGCACGCATCTAGCTGT
TGGAACAAGTAATGGCAAAGTCCAGTTATGGGATTCCTCGCGCTGTAAGAGGATAAGAAC
CATGGAGGGTCATCGATTACGAGTTGGCGCACTTGCGTGGAGCTCATCCATGCTGTCTTC
AGGAAGCCGAGACAAGAGTATTCTTCAGCGTGATATACGTGCTCAAGAAGATTTTGTCAG
TAAGCTGAGTGGTCATAAATCAGAGGTTTGTGGGCTCAAATGGTCTTATGATAACCGTGA
ATTAGCTTCAGGTGGAAATGATAATCGGCTTTTTGTATGGAACAACCATTCAACACAACC
TGTGCTGAAATACTGTGAGCATACTGCTGCGGTTAAGGCCATTGCATGGTCCCCCCATCT
CCATGGGCTTCTAGCATCCGGTGGAGGCACAGCTGATCGATGCATTAGATTCTGGAACAC
CACCACTAATACACATCTCAGTTGCATGGACACTGGCAGTCAGGTCTGTAATCTTGTGTG
GTCGAAGAATGTCAATGAATTAGTCAGCACACATGGTTACTCTCAAAATCAGATAATAGT
TTGGAGATATCCGACAATGTCTAAGATAGCTACTCTGACAGGTCATACATATAGAGTCTT
ATATCTTGCTATATCTCCAGATGGACAGACAATTGTCACTGGAGCAGGAGATGAAACACT
TCGATTCTGGAATGTTTTCCCTTCTCCCAAGTCAAAGAACACCGAGACTGAAATTGGTGC
ATCTTCGTTTGGTAGAACTCAGATCAGGTGACGAACTGTAATTATTTTCCACTCGTAGAA
ATTATTCCATCAAGAAATACACATCACATTTTTCTGTTTGATGGAGCGGCAAGAAAAGAT
GCAATTTTACTTGAGTCAATTATTCTTTCATTATGTCACAAAATGTACAGTTGGAGATGT
TATTTAATTCTCATTAACATCTCCTATTCATCATGTAATATATGGGGAAAGTGGAAGAGG
TTCCTTTCTAAGGAACATCTAATGTAAGGAAAAACCACAGTTCCTTGTAAATAAAAGTTC
ACTTTTTTCCTCGAATAACAAGTCTTTTTTTCTGCCCCCAAGGCTTTGAACTAGTAGCAA
GAGCGTAACTCGTGATGTGTGTGAACTGCATGGCAGGTTTGCTACCATATTGGTAAATAG
T