Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g079530.3.1
CDS Infomation

CPD photolyase (AHRD V3.3 *** Q9AVI6_CUCSA)
Sequence

ATGGCTTCTGCAATTCCAGTTGTTCAGTCGGGTCGGATCCGGGTTGTGAAGCAAGGATCA
GGACCGTTGGTTGGACCGGTGGTGTATTGGATGTTTAGAGATCAACGGATAAGAGATAAC
TGGGCGTTGATCCACGCCGTTGATCAAGCTAACAAGGCAAATGTACCTGTAGCTATTGCT
TTCAATTTGTTCGATCAGTTTTTAGGTGCTAAAGCTAGACAGTTAGGGTTTATGCTTAGA
GGCCTTGAGAAGCTTCAGGGGAACCTCGAAAGTACTCTTCGAATTCCGTTTTTCCTATTT
CAGGGAGAAGCAATAGACACAATTCCCAACTTTCTTAAAGAATGTGGAGCTTCTCTTCTA
GTAACGGATTTCTCACCGTTGAGGGATGTTAGGAGTTGGAAAGAAAAAATTTGTGAGAGG
GTTGATGAATCAGTGACAGTACATGAGGTTGATGCACACAACATTGTTCCTCTTTGGGTG
GCATCAAATAAATTGGAATACAGTGCTAGAACGATACGTGGTAAAATAAATAAGCTGCTT
CCTGAGTATCTGATTGAATTGCCTGCAATAGAGCCTCTTAAGATAAAGTGGTCTTCTTCA
AACGCTCCAATAGATTGGCCAAAACTAGTTTCAGATGTTGTAAGGAAAGGAGCAGAAGTA
CCTGAACTTGAATGGTGTGAACCAGGTGAAGACGCTGCATTCGAAGTGTTAATGGGAAGT
AAAAAAGGGTTCCTGACTACCAGGTTGAAGACTTATTCAACGGACCGGAACAACCCTCTG
AAACCCCAAGCACTTTCTGGTCTCTCTCCTTATTTGCACTTTGGGCAGATATCTGCACAG
AGATGTGCATTAGAAGCAAACAAAGTTCGGAAAAACTATACTCAGGCAGTTGACACATTT
CTGGAGGAAATGATTGTGCGCAGAGAGCTTTCTGATAACTTCTGCTATTATCAGCCTCAA
TATGATTCATTACTGGGTGCATGGGAATGGGCGCGTAAAACCTTAATGGAACATGCATCT
GATAAACGAGAACATATATACACCCGAGAGCAATTGGAGAAGGCACAGACTGCAGATGTT
CTTTGGAATGCTTCCCAATTAGAGATGGTTCATTATGGAAAAATGCATGGTTTTATGAGG
ATGTATTGGGCTAAAAAGATACTCGAGTGGACAAATGGACCAGAAGAAGCTCTGGCCATC
ACAATATATTTAAATGATAAGTATCATATAGATGGAAGAGACCCTAGTGGTTATGTTGGA
TGCATGTGGTCAATATGTGGCGTACACGACCAGGGTTGGCGAGAACGCCCGGTATTTGGG
AAAATCAGATACATGAACTATGCAGGTTGCAAGAAGAAGTTCAATGTAGACGGATATATT
TCATACGTTAAGAGGCTAGTTGGTGAAAGCAAGAAAAGAAAAGCAGAAGTAATTTTGGAC
AAAAAGGCAAAAGAATTGCGTAATTAG

Peptide Sequence

PEP ID

Solyc08g079530.3.1
PEP Infomation

CPD photolyase (AHRD V3.3 *** Q9AVI6_CUCSA)
Sequence

MASAIPVVQSGRIRVVKQGSGPLVGPVVYWMFRDQRIRDNWALIHAVDQANKANVPVAIA
FNLFDQFLGAKARQLGFMLRGLEKLQGNLESTLRIPFFLFQGEAIDTIPNFLKECGASLL
VTDFSPLRDVRSWKEKICERVDESVTVHEVDAHNIVPLWVASNKLEYSARTIRGKINKLL
PEYLIELPAIEPLKIKWSSSNAPIDWPKLVSDVVRKGAEVPELEWCEPGEDAAFEVLMGS
KKGFLTTRLKTYSTDRNNPLKPQALSGLSPYLHFGQISAQRCALEANKVRKNYTQAVDTF
LEEMIVRRELSDNFCYYQPQYDSLLGAWEWARKTLMEHASDKREHIYTREQLEKAQTADV
LWNASQLEMVHYGKMHGFMRMYWAKKILEWTNGPEEALAITIYLNDKYHIDGRDPSGYVG
CMWSICGVHDQGWRERPVFGKIRYMNYAGCKKKFNVDGYISYVKRLVGESKKRKAEVILD
KKAKELRN*

Transcript Sequence

Transcript ID

Solyc08g079530.3.1
Transcript Infomation

CPD photolyase (AHRD V3.3 *** Q9AVI6_CUCSA)
Sequence

CAACTGTACCTGTACGGAAACCAAAACACGAAGTTCTCCACTATACTCCGTTAACCTACG
CATTTTCTCCGTCCGGCGCACGTTAGTACAGTTTTTGTTCGCCGAGTTCCGCCATGGCTT
CTGCAATTCCAGTTGTTCAGTCGGGTCGGATCCGGGTTGTGAAGCAAGGATCAGGACCGT
TGGTTGGACCGGTGGTGTATTGGATGTTTAGAGATCAACGGATAAGAGATAACTGGGCGT
TGATCCACGCCGTTGATCAAGCTAACAAGGCAAATGTACCTGTAGCTATTGCTTTCAATT
TGTTCGATCAGTTTTTAGGTGCTAAAGCTAGACAGTTAGGGTTTATGCTTAGAGGCCTTG
AGAAGCTTCAGGGGAACCTCGAAAGTACTCTTCGAATTCCGTTTTTCCTATTTCAGGGAG
AAGCAATAGACACAATTCCCAACTTTCTTAAAGAATGTGGAGCTTCTCTTCTAGTAACGG
ATTTCTCACCGTTGAGGGATGTTAGGAGTTGGAAAGAAAAAATTTGTGAGAGGGTTGATG
AATCAGTGACAGTACATGAGGTTGATGCACACAACATTGTTCCTCTTTGGGTGGCATCAA
ATAAATTGGAATACAGTGCTAGAACGATACGTGGTAAAATAAATAAGCTGCTTCCTGAGT
ATCTGATTGAATTGCCTGCAATAGAGCCTCTTAAGATAAAGTGGTCTTCTTCAAACGCTC
CAATAGATTGGCCAAAACTAGTTTCAGATGTTGTAAGGAAAGGAGCAGAAGTACCTGAAC
TTGAATGGTGTGAACCAGGTGAAGACGCTGCATTCGAAGTGTTAATGGGAAGTAAAAAAG
GGTTCCTGACTACCAGGTTGAAGACTTATTCAACGGACCGGAACAACCCTCTGAAACCCC
AAGCACTTTCTGGTCTCTCTCCTTATTTGCACTTTGGGCAGATATCTGCACAGAGATGTG
CATTAGAAGCAAACAAAGTTCGGAAAAACTATACTCAGGCAGTTGACACATTTCTGGAGG
AAATGATTGTGCGCAGAGAGCTTTCTGATAACTTCTGCTATTATCAGCCTCAATATGATT
CATTACTGGGTGCATGGGAATGGGCGCGTAAAACCTTAATGGAACATGCATCTGATAAAC
GAGAACATATATACACCCGAGAGCAATTGGAGAAGGCACAGACTGCAGATGTTCTTTGGA
ATGCTTCCCAATTAGAGATGGTTCATTATGGAAAAATGCATGGTTTTATGAGGATGTATT
GGGCTAAAAAGATACTCGAGTGGACAAATGGACCAGAAGAAGCTCTGGCCATCACAATAT
ATTTAAATGATAAGTATCATATAGATGGAAGAGACCCTAGTGGTTATGTTGGATGCATGT
GGTCAATATGTGGCGTACACGACCAGGGTTGGCGAGAACGCCCGGTATTTGGGAAAATCA
GATACATGAACTATGCAGGTTGCAAGAAGAAGTTCAATGTAGACGGATATATTTCATACG
TTAAGAGGCTAGTTGGTGAAAGCAAGAAAAGAAAAGCAGAAGTAATTTTGGACAAAAAGG
CAAAAGAATTGCGTAATTAGTAATTTTATTGATAGACTTTACTCCTGGATTTTCCAGAGA
TTGATAAAAGCTTAGTAACTAACCTTTTTATTTCTTTTTTGTAAAACTTATGAATCTTTA
GACCTCAGTATAAAGATCCCTTTTGAACAAATCATAATGTAGTTGTATTTGATCAAATTC
TAATTGTTGTTTCTCTAGACAATTGAGACTTACGTTACTAAATGAACACATTAT