Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g079260.3.1
CDS Infomation

Tetratricopeptide repeat-containing family protein (AHRD V3.3 *** U5GMD7_POPTR)
Sequence

ATGGACCCGATGAAGTTGAATCAACTGAAGCAATTCGTTGAACAGTGCAAATCCAATCCT
TCCATTCTCTCCGATCCTTCTCTTTCATTTTTCCGTGACTACATTGAGAATCTCGGTGCT
AAACTTCCTCCGGCTGCTTACGACACCGGCGATTACAAAGAGAAGTCCCATGCGGTGGAT
GCGAGTGATGATGAGATGGATGATGATGAGAATGATGCTAATATCAAAGAGACAGTTGAA
GAAGAGGAGGAGCCTGAGATAATTGAATCTGATATTGAGCTTGATGAGAGTGACACTGTG
GAACCTGACAATGATGAGCCACAGAAGATGGGAGACCCTTCTGTGGAGGTGACTGAAGAA
AGCCGTGATGCTTCTCAGGAGTCCAAAGCTGAGGCCATGGAAGCAATTTCTGAAGGTAAG
TTAGAAGATGCAATTGAGCATCTTACGAAGGCAGTTCTCCTCAATCCTAAATCAGCAATT
ATGTATGCTACTAGAGCTAGTGTTTATATCAAGATGAAGAAGCCAAACGCTGCCATACGA
GATGCAACTGCAGCATTGGAGTTGAATCCAGATTCTGCTAAAGGTTACAAATCTCGTGGC
ATTGCCAGAGCCATGCTGGGACAGTGGGAGGCAGCTGCTAAGGATCTTCATGTGGCTTCG
AAGCTGGACTATGATGAGGAAATAAGTGCTGTGCTTAAGAAGGTTGAGCCCAATGCACAT
AGAATTGAAGAACACCGCAGGAAATATGATAGGTTGCGCAAAGAACGAGAAGATAGAAAG
ATTGAGCGTGAGAGACAACGAAGAAAGGCTGAAGCTCAGGCTGCTTATGAAAAGGCCAAG
AAGCAAGAAGAATCATCAAGTAGGAGAGCTGGTGGCATGCCCGGAGGCTTTCCTGGTGGC
ATGCCCGGAGGCTTTCCTGGTGGCATGCCCGGATTTCCTGGTGGCATGCCCGGAGGTTTT
CCTGGTGGCATGCCTGGAGGCTTTCCAGGTGGCATGCCCGGAGGCTTTCCAGGGGGTATG
CCTGGGTCTGCACCTGGAGGAATGCCCGGAGGCATGCCTGGGGCTGCACCTGGAGGAATG
CCCGGTAACATGGACTACAGCAAAATACTGAATGACCCTGAATTAATGGCGGCATTCAAG
GATCCAGATGTCATGGCTGCACTGCAAGATGTGATGAAGAACCCAGCTAATTTGGCCAAG
CATCAAGGAAATCCTAAGATTGCTCCTATTATTGCAAAAATGATGGGCAAGTTTGCTGGA
AATAATTGA

Peptide Sequence

PEP ID

Solyc08g079260.3.1
PEP Infomation

Tetratricopeptide repeat-containing family protein (AHRD V3.3 *** U5GMD7_POPTR)
Sequence

MDPMKLNQLKQFVEQCKSNPSILSDPSLSFFRDYIENLGAKLPPAAYDTGDYKEKSHAVD
ASDDEMDDDENDANIKETVEEEEEPEIIESDIELDESDTVEPDNDEPQKMGDPSVEVTEE
SRDASQESKAEAMEAISEGKLEDAIEHLTKAVLLNPKSAIMYATRASVYIKMKKPNAAIR
DATAALELNPDSAKGYKSRGIARAMLGQWEAAAKDLHVASKLDYDEEISAVLKKVEPNAH
RIEEHRRKYDRLRKEREDRKIERERQRRKAEAQAAYEKAKKQEESSSRRAGGMPGGFPGG
MPGGFPGGMPGFPGGMPGGFPGGMPGGFPGGMPGGFPGGMPGSAPGGMPGGMPGAAPGGM
PGNMDYSKILNDPELMAAFKDPDVMAALQDVMKNPANLAKHQGNPKIAPIIAKMMGKFAG
NN*

Transcript Sequence

Transcript ID

Solyc08g079260.3.1
Transcript Infomation

Tetratricopeptide repeat-containing family protein (AHRD V3.3 *** U5GMD7_POPTR)
Sequence

CGACTTATAAATGAAAATATAATAAAGCAAATAAAACGGAACAAAGAGTTTATCCAGTAA
TAGAAGCTACTAGAAGAACCTAGTCAGCTCCAGTCCCCTTCCATTTTCCTCGCCTCACTA
CCAAAAGCTAGGGTTTACAGTTTCTACAATTTCAAAATTTTTTGAATCTGTAGTAATCGT
ATTTGAAGGTAATCGGAAAAAGCTATGGACCCGATGAAGTTGAATCAACTGAAGCAATTC
GTTGAACAGTGCAAATCCAATCCTTCCATTCTCTCCGATCCTTCTCTTTCATTTTTCCGT
GACTACATTGAGAATCTCGGTGCTAAACTTCCTCCGGCTGCTTACGACACCGGCGATTAC
AAAGAGAAGTCCCATGCGGTGGATGCGAGTGATGATGAGATGGATGATGATGAGAATGAT
GCTAATATCAAAGAGACAGTTGAAGAAGAGGAGGAGCCTGAGATAATTGAATCTGATATT
GAGCTTGATGAGAGTGACACTGTGGAACCTGACAATGATGAGCCACAGAAGATGGGAGAC
CCTTCTGTGGAGGTGACTGAAGAAAGCCGTGATGCTTCTCAGGAGTCCAAAGCTGAGGCC
ATGGAAGCAATTTCTGAAGGTAAGTTAGAAGATGCAATTGAGCATCTTACGAAGGCAGTT
CTCCTCAATCCTAAATCAGCAATTATGTATGCTACTAGAGCTAGTGTTTATATCAAGATG
AAGAAGCCAAACGCTGCCATACGAGATGCAACTGCAGCATTGGAGTTGAATCCAGATTCT
GCTAAAGGTTACAAATCTCGTGGCATTGCCAGAGCCATGCTGGGACAGTGGGAGGCAGCT
GCTAAGGATCTTCATGTGGCTTCGAAGCTGGACTATGATGAGGAAATAAGTGCTGTGCTT
AAGAAGGTTGAGCCCAATGCACATAGAATTGAAGAACACCGCAGGAAATATGATAGGTTG
CGCAAAGAACGAGAAGATAGAAAGATTGAGCGTGAGAGACAACGAAGAAAGGCTGAAGCT
CAGGCTGCTTATGAAAAGGCCAAGAAGCAAGAAGAATCATCAAGTAGGAGAGCTGGTGGC
ATGCCCGGAGGCTTTCCTGGTGGCATGCCCGGAGGCTTTCCTGGTGGCATGCCCGGATTT
CCTGGTGGCATGCCCGGAGGTTTTCCTGGTGGCATGCCTGGAGGCTTTCCAGGTGGCATG
CCCGGAGGCTTTCCAGGGGGTATGCCTGGGTCTGCACCTGGAGGAATGCCCGGAGGCATG
CCTGGGGCTGCACCTGGAGGAATGCCCGGTAACATGGACTACAGCAAAATACTGAATGAC
CCTGAATTAATGGCGGCATTCAAGGATCCAGATGTCATGGCTGCACTGCAAGATGTGATG
AAGAACCCAGCTAATTTGGCCAAGCATCAAGGAAATCCTAAGATTGCTCCTATTATTGCA
AAAATGATGGGCAAGTTTGCTGGAAATAATTGAGAGCTTTTGGGATTTTGTCCGTAGGAA
TTTCTAGAGTTTGATAGAGAACATGTTGTTTACCGTAAGCTTGTTTTTATCGAGTATAAA
GTCATTCTCCAAGATTGTGTCTAATCCAAGTTTAGTTTCAAACTACAGCTGTCTTCTTTT
CTTATAGATTTGTTATTGTTATGTGTATCAACTATTTTTCCTTCTGGTGACTGATGTTTT
GGTATGCAAAAACTGGTTTCTATCTGCATCTTT