Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g079240.3.1
CDS Infomation

(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (AHRD V3.3 *** A0A0B0NEC9_GOSAR)
Sequence

ATGGCCGCAGCATTCAGCAGCAGCTTTACTAGTTCCGCCATTGGAGCTCAATTCTACAGG
CCCAAATTTGTAAAACCCAAGACTTTTGTAAACACAATTCGCTGTGCTGGTAGACTAGAA
TGGGATCCAGATGGTTTATTGGGTCCGCCTCAAACGGGTCATATAGCCCGACTCGAGTTC
CAGAGACGCCTTGAGAACGATGCTGCGGCCAGAGAAGAATTTGAACGGCAAGTTCGTGAA
GAGAAAGAACGTCGCAGAGTTCTTCGTGAGGATCAAGCGATTATCATCATGCCAAAAGCT
ATAGATTTTGGCATAATGTCACGAGTGATTCCGGATACAGTGGAAGGGCTTGTGGAGTTT
TTTCTTGACACTGAAGCTCAAGAGATTGAATTTGAGATTGCAAGAATGAGACCACGATTG
AACAAAGAATTCTTTGACCATCTGCAAGTCGAACTTGGAAAGCTGCGTTTTTCTGTAAAC
AAAACTCAGGCTGTGGAAGACAGATTATTTGAACTGGAAGCACTGCAAAAGGCCCTGCAA
GAAGCAACAGAAGCCTATGATAAATTACAAGCAGATCTTGTAGCAACAAAGAAGAACCTA
ACTGAGATTTTGACTTCAAAGGATGTCAAGGCTACTCTTTTGGATTTGGTTGAGAGGAAT
GCGCTGAATAGACCCTTGTTGACGCTTCTTGATGAAAACATTGCAACTGCACATAGTGTT
AACCAGAAACAAGCAGCAGAATACATGGAAAAGCTGAGAGGACTTGTTCTGAAGTACCTA
ACAGTATAG

Peptide Sequence

PEP ID

Solyc08g079240.3.1
PEP Infomation

(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (AHRD V3.3 *** A0A0B0NEC9_GOSAR)
Sequence

MAAAFSSSFTSSAIGAQFYRPKFVKPKTFVNTIRCAGRLEWDPDGLLGPPQTGHIARLEF
QRRLENDAAAREEFERQVREEKERRRVLREDQAIIIMPKAIDFGIMSRVIPDTVEGLVEF
FLDTEAQEIEFEIARMRPRLNKEFFDHLQVELGKLRFSVNKTQAVEDRLFELEALQKALQ
EATEAYDKLQADLVATKKNLTEILTSKDVKATLLDLVERNALNRPLLTLLDENIATAHSV
NQKQAAEYMEKLRGLVLKYLTV*

Transcript Sequence

Transcript ID

Solyc08g079240.3.1
Transcript Infomation

(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (AHRD V3.3 *** A0A0B0NEC9_GOSAR)
Sequence

ACACAAAATAAAATGGTTGGAGTATAGGAAGGAAAATTGTAGATAAGGGTGTGCGCATTT
CTAACGGATAAAGCACCGCGAAACTAACTGAACTCAATAACCAGTCATTCAAAAGCTCTC
AAAAACGGCCAACAATGGCCGCAGCATTCAGCAGCAGCTTTACTAGTTCCGCCATTGGAG
CTCAATTCTACAGGCCCAAATTTGTAAAACCCAAGACTTTTGTAAACACAATTCGCTGTG
CTGGTAGACTAGAATGGGATCCAGATGGTTTATTGGGTCCGCCTCAAACGGGTCATATAG
CCCGACTCGAGTTCCAGAGACGCCTTGAGAACGATGCTGCGGCCAGAGAAGAATTTGAAC
GGCAAGTTCGTGAAGAGAAAGAACGTCGCAGAGTTCTTCGTGAGGATCAAGCGATTATCA
TCATGCCAAAAGCTATAGATTTTGGCATAATGTCACGAGTGATTCCGGATACAGTGGAAG
GGCTTGTGGAGTTTTTTCTTGACACTGAAGCTCAAGAGATTGAATTTGAGATTGCAAGAA
TGAGACCACGATTGAACAAAGAATTCTTTGACCATCTGCAAGTCGAACTTGGAAAGCTGC
GTTTTTCTGTAAACAAAACTCAGGCTGTGGAAGACAGATTATTTGAACTGGAAGCACTGC
AAAAGGCCCTGCAAGAAGCAACAGAAGCCTATGATAAATTACAAGCAGATCTTGTAGCAA
CAAAGAAGAACCTAACTGAGATTTTGACTTCAAAGGATGTCAAGGCTACTCTTTTGGATT
TGGTTGAGAGGAATGCGCTGAATAGACCCTTGTTGACGCTTCTTGATGAAAACATTGCAA
CTGCACATAGTGTTAACCAGAAACAAGCAGCAGAATACATGGAAAAGCTGAGAGGACTTG
TTCTGAAGTACCTAACAGTATAG