Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g078600.3.1
CDS Infomation	DNA-directed RNA polymerase III subunit RPC5 (AHRD V3.3 *** A0A0B0N397_GOSAR)
Sequence	ATGGATTTGGACTTCGACGGTCCAAGTAAAGTTCCGACTAGGCAATCCCGTTTTGCTCCT AAAAGTTCTAAATTGAAGCCTCAACCGGAAACCAAACCAAAAATTGAAACACTGCCACAG TCTGATTCAGCCATTTCGACTAAAAAGGAAGAGTTGACTGTTCATTTAGCCGAAAACAGA GCGGTTACAGGTAATGACGACGTTCCATTGGAGGGAGAGACTACAGGAAACGACCTGGGA GAAGATGAAGAACAAGTCACTGACAGCGATCATGATGAAATTGTTCGTGAAATTGATGTG TGTATTAACCCTTCTTTTGATCCCAGCACTCAGTTATATGTGTTTCAATACCCATTGAAG GCCGTATGGCGTCCGTATGAATTGGAGGAAAGATGTCAAGAGGTGAGGTTGAGACCTTCA ACTGCAGAAATGGAGGTTGATTTGGCAATAGATTTGGATTCTAAAAACTTTGACAGAGAC TCTGTCCATGCTGCAACAGTAAAAAAGCAGATGCTTTCTACATCATGGATACCATTACCA ACTTGCACCTCTGGATATGCTGTTGGGGTCCTCATTGGTGATAAGTTACACCTCAATCCT GTTCATGCAGTTGTACAACTCCGGCCATCAAAGCGGAATCTTAAGGAAAGTGAGTTGAAG AAGAACATTATCACCAACAATGATGAAAAAAGTGTTGAAAATGAAGACGTCAAGGAGAAA AGGCCCGTGGGACCATCAAAGAAGCAGAACAAATCACCTGGGATCGAAAAGGATATTGGA GAGCATTGGTTACATCTAAAATACCATGGGGCTAGGAGTGATATTTCAGCCAGATATCTG CAGAAAATGTCCATGGAGGAAGGCTCTCCAGTACCATTTTCAATGAGCCCGGTTGATTAT CTGAATGCCTTTTGTCCTGGAAGACCAACTGACACTGACAGATTAAAAATTCTTCGAACA AGGTTGTCTCAATTACCACTTGAAGAACGTGTCAGAATATGGCTTCTTGAGGGGCCTCCA ATTCATCGTTTTGATGCTTTAATGCACCTAGCGCCGGATAATTCTGCTGATGAGATTATA AGAGTCCTCCAAATATATGCACAATTAGTTCAAGGATTGTGGGTTCCAAAAAGTTCATTA GTCTATGGAACGAATAGTGGAGTTGAAGTTTTAGCGAGGAATTTCGTTCTGTACGAGTTT ACCAAGGGTATCTTAATTAAAAAGTCAGTTTTTGGCAGGAGACCTGAATTCCTTAAAGCT GCGACACCAGCACTAAAATCATTAGCTGTCGAGAGGCCTGACCTGAATGATTGGAAGCTC AAAGAGCATCCTGACAAGAAATTTGAAAACCTTTATGGTGATGTAGTGAGAGAGCAGCAA GCTACCTGGGAGTGCTTGGGAAAACAGATCAATGATGTTTTGCCTGGAGGAAGAACCAGG CCTACTATGAAGAATCCTATAAACCGTAATGCCGACATTACTGCATTGCCGAGTGGTGAT AAGCCCACTTCTAGCTCACTTTTGAGAACATCTATGTCCGAAGAAATTCGAGAAGCTTTG CCAAAGGCACTTCAAGAAGTTTTTAGAACTTATAAGGTTTGCAGTTTCCAACAAATCCGC CAAGGTCTGCGAAAACTTGGAGTTTCTAAGTCATATCCTCCAAAGGGAGCTCCAAGGAAA GCTATAACTGCATCCGTTGATGTTTTTGATGCACCTCAAGAGGAGATACAGGCAGTGATT AATCAGGTTGCTGTGAACATCCATGGTGTCTATGTTTTGAAGTCGTCACCAGATAATCCA CAGTATGACACATTGAGGAAAATCGTAATTGATCTTTTTATGGCTGAAGGACCAAGTGCC AAGCTAAAGAAAGCATCTGTAACTGAAGCTGCCAAGTTGCAACTGAATAGGGATATTACC AATGTTGAGTTTCTAAAGGTTATGAAGGAACTATGTCATTCAGAAAAATCAGCATGGGTT TTGAGAAGTGGCGACGGCAAGCCAGAATAG

Peptide Sequence

PEP ID	Solyc08g078600.3.1
PEP Infomation	DNA-directed RNA polymerase III subunit RPC5 (AHRD V3.3 *** A0A0B0N397_GOSAR)
Sequence	MDLDFDGPSKVPTRQSRFAPKSSKLKPQPETKPKIETLPQSDSAISTKKEELTVHLAENR AVTGNDDVPLEGETTGNDLGEDEEQVTDSDHDEIVREIDVCINPSFDPSTQLYVFQYPLK AVWRPYELEERCQEVRLRPSTAEMEVDLAIDLDSKNFDRDSVHAATVKKQMLSTSWIPLP TCTSGYAVGVLIGDKLHLNPVHAVVQLRPSKRNLKESELKKNIITNNDEKSVENEDVKEK RPVGPSKKQNKSPGIEKDIGEHWLHLKYHGARSDISARYLQKMSMEEGSPVPFSMSPVDY LNAFCPGRPTDTDRLKILRTRLSQLPLEERVRIWLLEGPPIHRFDALMHLAPDNSADEII RVLQIYAQLVQGLWVPKSSLVYGTNSGVEVLARNFVLYEFTKGILIKKSVFGRRPEFLKA ATPALKSLAVERPDLNDWKLKEHPDKKFENLYGDVVREQQATWECLGKQINDVLPGGRTR PTMKNPINRNADITALPSGDKPTSSSLLRTSMSEEIREALPKALQEVFRTYKVCSFQQIR QGLRKLGVSKSYPPKGAPRKAITASVDVFDAPQEEIQAVINQVAVNIHGVYVLKSSPDNP QYDTLRKIVIDLFMAEGPSAKLKKASVTEAAKLQLNRDITNVEFLKVMKELCHSEKSAWV LRSGDGKPE*

Transcript Sequence

Transcript ID	Solyc08g078600.3.1
Transcript Infomation	DNA-directed RNA polymerase III subunit RPC5 (AHRD V3.3 *** A0A0B0N397_GOSAR)
Sequence	CAAAAAGGAAAAGATTCTTTTTGATTAAGAGTAATAATAATTCTATTTAGCATGTAGTAA TAAATTCTAATTAAATAACTAGAACTAAAGAAGAACAAAAAGGGAAAGAGAAATTAAGGT GTCATTTTTGTTTCATTCGGTTCGAGTTCACTAAATCCCATGTTTCTTGCCTCAATTCAT AAGCCCTAAACCCTCCCTTCATCCTCTGGATTGAAGCTTAATTTTCCGGTGAAGTACACG GCGGAGATGGATTTGGACTTCGACGGTCCAAGTAAAGTTCCGACTAGGCAATCCCGTTTT GCTCCTAAAAGTTCTAAATTGAAGCCTCAACCGGAAACCAAACCAAAAATTGAAACACTG CCACAGTCTGATTCAGCCATTTCGACTAAAAAGGAAGAGTTGACTGTTCATTTAGCCGAA AACAGAGCGGTTACAGGTAATGACGACGTTCCATTGGAGGGAGAGACTACAGGAAACGAC CTGGGAGAAGATGAAGAACAAGTCACTGACAGCGATCATGATGAAATTGTTCGTGAAATT GATGTGTGTATTAACCCTTCTTTTGATCCCAGCACTCAGTTATATGTGTTTCAATACCCA TTGAAGGCCGTATGGCGTCCGTATGAATTGGAGGAAAGATGTCAAGAGGTGAGGTTGAGA CCTTCAACTGCAGAAATGGAGGTTGATTTGGCAATAGATTTGGATTCTAAAAACTTTGAC AGAGACTCTGTCCATGCTGCAACAGTAAAAAAGCAGATGCTTTCTACATCATGGATACCA TTACCAACTTGCACCTCTGGATATGCTGTTGGGGTCCTCATTGGTGATAAGTTACACCTC AATCCTGTTCATGCAGTTGTACAACTCCGGCCATCAAAGCGGAATCTTAAGGAAAGTGAG TTGAAGAAGAACATTATCACCAACAATGATGAAAAAAGTGTTGAAAATGAAGACGTCAAG GAGAAAAGGCCCGTGGGACCATCAAAGAAGCAGAACAAATCACCTGGGATCGAAAAGGAT ATTGGAGAGCATTGGTTACATCTAAAATACCATGGGGCTAGGAGTGATATTTCAGCCAGA TATCTGCAGAAAATGTCCATGGAGGAAGGCTCTCCAGTACCATTTTCAATGAGCCCGGTT GATTATCTGAATGCCTTTTGTCCTGGAAGACCAACTGACACTGACAGATTAAAAATTCTT CGAACAAGGTTGTCTCAATTACCACTTGAAGAACGTGTCAGAATATGGCTTCTTGAGGGG CCTCCAATTCATCGTTTTGATGCTTTAATGCACCTAGCGCCGGATAATTCTGCTGATGAG ATTATAAGAGTCCTCCAAATATATGCACAATTAGTTCAAGGATTGTGGGTTCCAAAAAGT TCATTAGTCTATGGAACGAATAGTGGAGTTGAAGTTTTAGCGAGGAATTTCGTTCTGTAC GAGTTTACCAAGGGTATCTTAATTAAAAAGTCAGTTTTTGGCAGGAGACCTGAATTCCTT AAAGCTGCGACACCAGCACTAAAATCATTAGCTGTCGAGAGGCCTGACCTGAATGATTGG AAGCTCAAAGAGCATCCTGACAAGAAATTTGAAAACCTTTATGGTGATGTAGTGAGAGAG CAGCAAGCTACCTGGGAGTGCTTGGGAAAACAGATCAATGATGTTTTGCCTGGAGGAAGA ACCAGGCCTACTATGAAGAATCCTATAAACCGTAATGCCGACATTACTGCATTGCCGAGT GGTGATAAGCCCACTTCTAGCTCACTTTTGAGAACATCTATGTCCGAAGAAATTCGAGAA GCTTTGCCAAAGGCACTTCAAGAAGTTTTTAGAACTTATAAGGTTTGCAGTTTCCAACAA ATCCGCCAAGGTCTGCGAAAACTTGGAGTTTCTAAGTCATATCCTCCAAAGGGAGCTCCA AGGAAAGCTATAACTGCATCCGTTGATGTTTTTGATGCACCTCAAGAGGAGATACAGGCA GTGATTAATCAGGTTGCTGTGAACATCCATGGTGTCTATGTTTTGAAGTCGTCACCAGAT AATCCACAGTATGACACATTGAGGAAAATCGTAATTGATCTTTTTATGGCTGAAGGACCA AGTGCCAAGCTAAAGAAAGCATCTGTAACTGAAGCTGCCAAGTTGCAACTGAATAGGGAT ATTACCAATGTTGAGTTTCTAAAGGTTATGAAGGAACTATGTCATTCAGAAAAATCAGCA TGGGTTTTGAGAAGTGGCGACGGCAAGCCAGAATAGTCTCCTACCTCCAAATCATGTTGT ACAGGTCAGGGAAAGTAAGTACATGTTAGTTGCGGAAATTCTCGATAACAAGTTGGAAGA AAGCTTTGCTTGAGGTTTCCCTTTACTCATACTTGTTAGTTTTTGGGTTATACAACGTCT CAAGTATAAGGTTGAGCTGTTGGTAGGAAACGTTTTGCATTTGCAAATCTATTAGAAAAT TTAGGAGATATTATTAATCAGAAGATATTGTAGAGATATACTTCTTTCCTTTAATCACTC AAAGAGTTCTAAGTTGGTTCTAGTTTTATGATGGCAAATGATACATGTTCCTTTG