Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g078460.3.1
CDS Infomation

Oxidoreductase family protein (AHRD V3.3 *** AT4G17370.1)
Sequence

ATGGTAGCAATAGTGAAATATGGAATAATTGGTGTTGGTATGATGGGAAGAGAACATTTA
ATCAATCTTTATCATCTTAAATCTGAAGGAGTTTCTGTTGTTGCCATTGCTGATCCACAC
CTTCCTTCCCAAAAATATGCACAAAAATTAGCTGATTCTTTTGATTGGCCTCTCCAGGTT
TATGCAGGGCACAAACAGTTATTAGAAAGTGGGCTATGTGATGTGGTTGTAGTTTCAACT
CCAAACATGACTCATTATGAAATTCTCATGGATATCATCAATCACCCAAAACCCCATCAT
GTTTTGGTGGAGAAGCCTTTGTGCACAAATGTTTCAGACTGCAAAAAGGTCATAACTGCT
GCAAAAACGAGATCCGATATGCTGGTACAAGTTGGTCTAGAGTACAGATACATGCCTCCT
GTTGCTAAACTGATAGACATTGTAAAAGAAGGAGCTTTAGGACAAGTGAAGATGGTGTCA
ATTCGAGAACATCGATTTCCATTTCTTGTTAAGGTCGATAATTGGAATCGTTTCAACTGC
AATACTGGAGGTACTCTGGTGGAGAAATGCTGTCATTTCTTTGATCTCATGAGGCTTTTC
ATTGGAGCTAATCCTGTTCGTGTTATGGCTTCTGGGGCGATGGATTTGAATCACAAAGAA
GAAGTGTATGATGGACGGGTGCCTGATATAATTGACAATGCTTATGTAATTGTGGAATTC
GACAATGGTTGTCGTGGCTTGCTTGATCTATGTATGTTTGCTGAAGGAAGTAAAAATGAG
CAAGAAATATCTGTAGTAGGTGATACTGGAAAGGGTGAAGCACTTGTGCCTGAGAGCATT
GTGCGTTGGGGCACACGAGCTGAAGGAAGAAACGGTGTACAGACATTACTAGCTGAAGAT
AAGCGAATAAAATATGATGGGCTACATCATGGTTCAAGCTACTTGGAGCACCTTCAGTTT
TTGTCAGCAGTAAGAGCAAGAGGAGAACAAGCTCCTGCTGTTGGTTTACATGATGGATTG
GTTTCAGTAGCCATTGGAGTTGCTGCACAGCTTTCGATTCAGAAAGGACGATCTGTTACG
ATTGAGGAAGTCATGCATGAACAGCTTCTTCAATCCACCAAGTCTTGA

Peptide Sequence

PEP ID

Solyc08g078460.3.1
PEP Infomation

Oxidoreductase family protein (AHRD V3.3 *** AT4G17370.1)
Sequence

MVAIVKYGIIGVGMMGREHLINLYHLKSEGVSVVAIADPHLPSQKYAQKLADSFDWPLQV
YAGHKQLLESGLCDVVVVSTPNMTHYEILMDIINHPKPHHVLVEKPLCTNVSDCKKVITA
AKTRSDMLVQVGLEYRYMPPVAKLIDIVKEGALGQVKMVSIREHRFPFLVKVDNWNRFNC
NTGGTLVEKCCHFFDLMRLFIGANPVRVMASGAMDLNHKEEVYDGRVPDIIDNAYVIVEF
DNGCRGLLDLCMFAEGSKNEQEISVVGDTGKGEALVPESIVRWGTRAEGRNGVQTLLAED
KRIKYDGLHHGSSYLEHLQFLSAVRARGEQAPAVGLHDGLVSVAIGVAAQLSIQKGRSVT
IEEVMHEQLLQSTKS*

Transcript Sequence

Transcript ID

Solyc08g078460.3.1
Transcript Infomation

Oxidoreductase family protein (AHRD V3.3 *** AT4G17370.1)
Sequence

GAGCCCCTCTTATAGATTTGTGGAGACATTGCTGTTCTGTTTATTTTATTATTTTTTTTC
TCAAAAAAATAAAGTGAATTTTGAGCCATGGTAGCAATAGTGAAATATGGAATAATTGGT
GTTGGTATGATGGGAAGAGAACATTTAATCAATCTTTATCATCTTAAATCTGAAGGAGTT
TCTGTTGTTGCCATTGCTGATCCACACCTTCCTTCCCAAAAATATGCACAAAAATTAGCT
GATTCTTTTGATTGGCCTCTCCAGGTTTATGCAGGGCACAAACAGTTATTAGAAAGTGGG
CTATGTGATGTGGTTGTAGTTTCAACTCCAAACATGACTCATTATGAAATTCTCATGGAT
ATCATCAATCACCCAAAACCCCATCATGTTTTGGTGGAGAAGCCTTTGTGCACAAATGTT
TCAGACTGCAAAAAGGTCATAACTGCTGCAAAAACGAGATCCGATATGCTGGTACAAGTT
GGTCTAGAGTACAGATACATGCCTCCTGTTGCTAAACTGATAGACATTGTAAAAGAAGGA
GCTTTAGGACAAGTGAAGATGGTGTCAATTCGAGAACATCGATTTCCATTTCTTGTTAAG
GTCGATAATTGGAATCGTTTCAACTGCAATACTGGAGGTACTCTGGTGGAGAAATGCTGT
CATTTCTTTGATCTCATGAGGCTTTTCATTGGAGCTAATCCTGTTCGTGTTATGGCTTCT
GGGGCGATGGATTTGAATCACAAAGAAGAAGTGTATGATGGACGGGTGCCTGATATAATT
GACAATGCTTATGTAATTGTGGAATTCGACAATGGTTGTCGTGGCTTGCTTGATCTATGT
ATGTTTGCTGAAGGAAGTAAAAATGAGCAAGAAATATCTGTAGTAGGTGATACTGGAAAG
GGTGAAGCACTTGTGCCTGAGAGCATTGTGCGTTGGGGCACACGAGCTGAAGGAAGAAAC
GGTGTACAGACATTACTAGCTGAAGATAAGCGAATAAAATATGATGGGCTACATCATGGT
TCAAGCTACTTGGAGCACCTTCAGTTTTTGTCAGCAGTAAGAGCAAGAGGAGAACAAGCT
CCTGCTGTTGGTTTACATGATGGATTGGTTTCAGTAGCCATTGGAGTTGCTGCACAGCTT
TCGATTCAGAAAGGACGATCTGTTACGATTGAGGAAGTCATGCATGAACAGCTTCTTCAA
TCCACCAAGTCTTGATTTTCAGTTTTTATAACTAGAGAACATGTAGTAGTAGCAACACAA
ATAACAAGGGTGTCCAGACCTTGATCGGTTCTCGACTTGTCTAGTATTCATCATACTATT
ATTGAAGAAATCATTTCACAAAGTAGAAAGACTTTTAAATGCACTCTGATGCATTTGATC
AATCTGGTAGCCAATTGATAAGTTAATGAAGCAAGTGATGGGAGGGTTTATGATAGTTCT
ATCTTCGTTTTGCT