Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g078380.3.1
CDS Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT4G17430.1)
Sequence

ATGGAAACTGAAACCTTCATTAGACCCAACAACAAATCAAAGAAGAAACAAAGATCTCCA
CTTTTAACTTTCCTTTTTCTCTTCACTTTGATTCTCCTTTTCTTCTACTTCAAAAACTTC
ATTTCCCCTTCTCTTCTTCCCCTTTCAAAAAAATCAATACCCATTATACCCCGTCCCCAA
CAATGCAACCCCGAAAATCGCCTGCAGGAGAAGTTCATGTGGTATGCGCCTCACAGTGGG
TTCAGCAACCAATTGGCTGAGTTCAAGAATGCGATTTTGATGGCTAAGATTCTAAATCGG
ACCCTAATTGTACCACCCGTGTTGGATCACCATGCTGTTGCGCTTGGTAGTTGTCCTAAA
TTTAGGGTTTTGGAACCTAATGAATTGAGATACTTGGTTTGGAATCATAGTATTCAGCTC
TTGCGTGATTGCAGGTATGTATCCATGGCTGATATAGTTGACCTTTCACCACTTGCTTCC
TATTCAACTGTGAGATTTATAGATTTTCGTGCTTTTGTGTCCTCCTGGTGTGGTGTAAAC
TTGGATGTTATTTGCTCTAAGAACCAAAATATACCATCTTCGTTATTCGAGAGCCTTCGA
CAATGTGGTTCTCTATTGTCTGGTTATTATGGTAGTTTCAGTGGTTGTTTGTCTGCTTTA
AAAGAAGATTGTAGAACAACAGTTTGGACATATAAAAAAGACGATGAGGATGGAGCTTTA
GACTCGTTTCAACCTGATGACCAACTTAGGAAGAAAAAGAAGATATCATTTATTAGGAGA
AGGAAAGATGTGTATAAAGCTCTTGGCCCTGGTTCTGCCGCAGAATCAGCCACTGTTTTG
GCATTTGGAAGCCTTTTCACTGCTCCTTATAAGGGATCTGAATCCCATATTGACATTCAT
GAAGCTCCTAATAATCCCATCGTACAGACCTTAATCAAAAAGATAGAGTTCCTTCCCTTT
GTGCCTGAAATAATAAATGCCGGCAAGAAGTTTGCTCTTCAAACTATCAAGGGTCCCTTT
CTTTGTGCACAGCTCAGGCTACTAGATGGACAATTCAAGAACCACCATAAAGCTACTTTT
CTTGGTCTGAAGCAGAAACTAGAATCTTTGAGGCAAACAGGACAGAAACAGATCCATGTA
TTTGTGATGACTGATCTCCCCATGGCTAATTGGACAGGGAGTTACTTGGGGAACTTAGCA
AAAGATTCCGATGCCTTCAAGCTGTTTGTTATCAGAGAAGAAGATGACTTGGTTCAAGAA
ACTGCTAGAGAAGTGATGGCTTCGGGGCATGGGCTAAAACTTGGTTCAGTTTCACAGAAT
ACGGTAGGGATTAGCGAGCATCACCATCCTCAATCATTAACTGATGTTCTCTTATACATA
GAGGAAGTAGTCTGCAGCTGTGCTTCTCTTGGTTTTGTAGGCACTTCTGGGTCAACAATT
GCTGAGAGCATAGAGTTAATGAGGAAACATGACATTTGTTCCGGCTAA

Peptide Sequence

PEP ID

Solyc08g078380.3.1
PEP Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT4G17430.1)
Sequence

METETFIRPNNKSKKKQRSPLLTFLFLFTLILLFFYFKNFISPSLLPLSKKSIPIIPRPQ
QCNPENRLQEKFMWYAPHSGFSNQLAEFKNAILMAKILNRTLIVPPVLDHHAVALGSCPK
FRVLEPNELRYLVWNHSIQLLRDCRYVSMADIVDLSPLASYSTVRFIDFRAFVSSWCGVN
LDVICSKNQNIPSSLFESLRQCGSLLSGYYGSFSGCLSALKEDCRTTVWTYKKDDEDGAL
DSFQPDDQLRKKKKISFIRRRKDVYKALGPGSAAESATVLAFGSLFTAPYKGSESHIDIH
EAPNNPIVQTLIKKIEFLPFVPEIINAGKKFALQTIKGPFLCAQLRLLDGQFKNHHKATF
LGLKQKLESLRQTGQKQIHVFVMTDLPMANWTGSYLGNLAKDSDAFKLFVIREEDDLVQE
TAREVMASGHGLKLGSVSQNTVGISEHHHPQSLTDVLLYIEEVVCSCASLGFVGTSGSTI
AESIELMRKHDICSG*

Transcript Sequence

Transcript ID

Solyc08g078380.3.1
Transcript Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT4G17430.1)
Sequence

ATTATTTAGAACTTGATGGATTTAGCGTCACTGTCCTCTATCTCTGATCCAAGAATTCAG
AGAGTTCAATTGAATCCATGGAAACTGAAACCTTCATTAGACCCAACAACAAATCAAAGA
AGAAACAAAGATCTCCACTTTTAACTTTCCTTTTTCTCTTCACTTTGATTCTCCTTTTCT
TCTACTTCAAAAACTTCATTTCCCCTTCTCTTCTTCCCCTTTCAAAAAAATCAATACCCA
TTATACCCCGTCCCCAACAATGCAACCCCGAAAATCGCCTGCAGGAGAAGTTCATGTGGT
ATGCGCCTCACAGTGGGTTCAGCAACCAATTGGCTGAGTTCAAGAATGCGATTTTGATGG
CTAAGATTCTAAATCGGACCCTAATTGTACCACCCGTGTTGGATCACCATGCTGTTGCGC
TTGGTAGTTGTCCTAAATTTAGGGTTTTGGAACCTAATGAATTGAGATACTTGGTTTGGA
ATCATAGTATTCAGCTCTTGCGTGATTGCAGGTATGTATCCATGGCTGATATAGTTGACC
TTTCACCACTTGCTTCCTATTCAACTGTGAGATTTATAGATTTTCGTGCTTTTGTGTCCT
CCTGGTGTGGTGTAAACTTGGATGTTATTTGCTCTAAGAACCAAAATATACCATCTTCGT
TATTCGAGAGCCTTCGACAATGTGGTTCTCTATTGTCTGGTTATTATGGTAGTTTCAGTG
GTTGTTTGTCTGCTTTAAAAGAAGATTGTAGAACAACAGTTTGGACATATAAAAAAGACG
ATGAGGATGGAGCTTTAGACTCGTTTCAACCTGATGACCAACTTAGGAAGAAAAAGAAGA
TATCATTTATTAGGAGAAGGAAAGATGTGTATAAAGCTCTTGGCCCTGGTTCTGCCGCAG
AATCAGCCACTGTTTTGGCATTTGGAAGCCTTTTCACTGCTCCTTATAAGGGATCTGAAT
CCCATATTGACATTCATGAAGCTCCTAATAATCCCATCGTACAGACCTTAATCAAAAAGA
TAGAGTTCCTTCCCTTTGTGCCTGAAATAATAAATGCCGGCAAGAAGTTTGCTCTTCAAA
CTATCAAGGGTCCCTTTCTTTGTGCACAGCTCAGGCTACTAGATGGACAATTCAAGAACC
ACCATAAAGCTACTTTTCTTGGTCTGAAGCAGAAACTAGAATCTTTGAGGCAAACAGGAC
AGAAACAGATCCATGTATTTGTGATGACTGATCTCCCCATGGCTAATTGGACAGGGAGTT
ACTTGGGGAACTTAGCAAAAGATTCCGATGCCTTCAAGCTGTTTGTTATCAGAGAAGAAG
ATGACTTGGTTCAAGAAACTGCTAGAGAAGTGATGGCTTCGGGGCATGGGCTAAAACTTG
GTTCAGTTTCACAGAATACGGTAGGGATTAGCGAGCATCACCATCCTCAATCATTAACTG
ATGTTCTCTTATACATAGAGGAAGTAGTCTGCAGCTGTGCTTCTCTTGGTTTTGTAGGCA
CTTCTGGGTCAACAATTGCTGAGAGCATAGAGTTAATGAGGAAACATGACATTTGTTCCG
GCTAAATTGCTTTGGCTCCTAGCTAACTAGTGTTACTTACCCAGCTTTGTGTTCACCCAT
TTGGCAGCTATAATCCATGTATCTGAAAATTCTCTCTTTTCAGAAGCGTGAACTTACAAA
TTAACAATGTCTTGATCGAATTCAAAGATGGACTAGGATGTCCTATTTGAAGGATACAAG
TGATCCATACTGCTGGAAGAGGGACTAATGGATGAAGATTCTGCTGCATATATCAATGGA
TTAGAAGCACTGATAGATGGATCTGTCTGGTGCGGAGTTGTTCTATTCTTCAAATGCATA
CTGCTAACTAGATTCTACCCTTATAAAGGGAGGAGGTAAGTCCAGATTTGGATCCAATAT
CAACAACCTTCAAGTTTGGAAGACTATTCGTTGATTTGTGGCATTTAACAACCGATAGCT
TAGCACCCTGTAGAACAATTGAACTGTACAAAATGTTTATGTACTCTGTTGGAGGTGCTC
CTTCTCTTTCTTGATTACACTTGCTCAGAGCTTAGTACACCAAACAGAAAAGAAATTGAA
AGGTTCTGCTCTATGTTGATTCTTAACCGCCGTTTGTCTCCTCTTCACTATTGTTTTCTA
TGGACATGGCAACACAAGCTTGTGATTATCTTTTGAGTCTGGCTGCAGTTGAATTATCTT
CTGGGTAATTGAAAAATTATTAATAAATTGGTCAACTTTACTATTTGAT