Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g078150.1.1
CDS Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9HYB0_POPTR)
Sequence	ATGCTTCTGTTTTATAGAAACTTGAAACATACCCGGAACTTAATCGAAATTTATCGGAGT TATCATCCATTTCGGAACACTGCAGGGTCGTGCGATTTCAACGTCAAAGGACCTTACTTT TCTTCTAGATACTACTGTTCTGGGAAGAGCAGTGATGAATGGACTGAAGATGTAGAATAT CTGGATGAATCAGGGAGTGTCATTTACTCTGGGAAGGGAATAAGGTCGGTTGAGCCGGGG CTGGATGACCATGTAATGGTCGGTGGATTGAAAAAGCCTATTTTGAATGCTTCCGCAGTA GCAAAGCTTGTTGAGATAGTGAAGAGGTGGAGATGGGGACCTGAAATGGAGACCCAATTG GATAAGCTCCAGTTTATACCAAATATGACTCATATTATGCAAGCATTGAAAGTTATGGAA GATAGTGATGCTTCATTGAGTTTGTTTCGGTGGGCAAAGAGACAACCTTGGTATAAGCCA AATGATGCATGTTATATCACACTGTTTGATAAATTGAACCAAAGTAGAGATTTTGATGGA ATTCAATTGGTTTTCGATGATATGGTTCTTGATTCAGGCGAGAATGGGGCGTCGTCTTTG TTTAATGCGTATAATAGAGTCATCCAGTACCTAGCTAAGGCAGAGAAATTTGAGGTAGCA TTCTGTTGTTTTAAGAAAATTCAAGAGTCTGGTTGCATAGTTGATACCGGGACATACAAT TCCCTTATCACCGTGTTCTTAAACAATGGTTTGCCATACAAGGCATTTGAGATATATGAG AACATGGAAAAAGCCGGGTGTTCATTAGATGCATCGAGTTATGAGTTAATGATTCCAAGT CTAGCTAAGTCAGGACGCCTTGATGCAGCGTTCAAGCTCTTCCAACAGATGAAGGTGAGC AACTTCCGACCAGGTTTTGGGATCTTTGCCTCACTGGTTGATTCAATGGGTAAAGCTGGG AGGTTGGACACATCACTAAAGGTATATACTGAAATGCAGGGTTTTGGGTTCAGGCCATCT GCCACTATGTTCGTATCCTTGATTGAGTCTTTTGTGAAAGCTGGAAAACTAGAGACTGCT CTAAGGCTTTGGGATGAAATGAAAAAAACAGGGTTTAGACCTAACTATGGGCTGTACACC ATGATTGTTGAGTCCCATGCAAAATCTGGGAAGCTTGATGTTGCTACGTCTGTCTTCTCA GATATGGAAAAGGCGGGATTTTTGCCCACTCCGTCCACCTATTCTTCTCTCCTGGAGATG CATGCTGCTTCTGGTCAGGTAGATGCTGCAATGAAGCTTTATAACTCAATGACAAATGCA GGTCTGAGACCAGGACTGAGTACTTATACAGCCTTGCTAACCCTTCTTGCCAAAAAGAAG CTTCTGGATGTTTCTGCAAAGATTTTACTGGAAATGAAGGCCATGGGATATTCAGTTGAT GTGAATGCTAGTGATGTTTTGATGGTTTACATTAAAGATGGTTCTGTTGATCTTGCTTTA AGGTGGCTACGGTTTATGGGTTCATCAGCCATCAGGACAAATAATTTCATTATCCGGCAG CTTTTTGAATCATGCATGAAGAGTGGGGCGTACGAGCAAGCCAAGCCTCTCCTCGAAACA TATGTGAACTCTGCTGCCAAAGTTGACCTCATTCTTTACACTTCAATTTTAGCACATTTA GTAAGATGCCAAGACGAGAACAATGAGAGGCATTTAATGTCAATCTTGAGTGCTACAAGG CATAAGGCTCACACTTTCATGTGTGGGCTCTTTACTGGGCCAGAGCAGAGGAAACAACCA GTTTTAACTTTTGTAAGGGAATTCTTCCAAGGCATTGATTATGAGCTGGAAGAAGGAGCT TCAAGGTATTTTGTTAATGTTCTCCTCAACTATCTTGTTCTCATGGGACAAATAAATCGT GCTCGTTGTGTATGGAAAGTTGCCTATGAAAACAAGCTTTTCCCAAAGGCTATAGTGTTT GATCAACATATTGCCTGGTCCCTTGATGTTAGAAACTTGTCAGTGGGAGCAGCTCTCGTT GCCGTGGTACATACGCTTCATAGGTTTAGGAAACGGATGTTGTATTATGGTGTTGTCCCT AGGCGGATCAAATTGGTTACTGGACCAACTTTGAAAATTGTGGTGGCACAGATGTTAAGC TCCGTGGAATCTCCCTTCGAGGTTAGTAAGGTTGTTTTGAGGGCCCCAGGAGATGCGGTC CTGGATTGGTTTAAGAAACCAATTGTTCAGCAATTTCTTTTGAATGAGATTCCATCAAGG GCTGATATTTTAATGCATAAACTCAACATACTTTTTCCAACATCTGCACCTGAAATCAGG TCGTTGTCCCCTCCTAAACCTATTTTTGCTGGAAAAGCAATGTAG

Peptide Sequence

PEP ID	Solyc08g078150.1.1
PEP Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9HYB0_POPTR)
Sequence	MLLFYRNLKHTRNLIEIYRSYHPFRNTAGSCDFNVKGPYFSSRYYCSGKSSDEWTEDVEY LDESGSVIYSGKGIRSVEPGLDDHVMVGGLKKPILNASAVAKLVEIVKRWRWGPEMETQL DKLQFIPNMTHIMQALKVMEDSDASLSLFRWAKRQPWYKPNDACYITLFDKLNQSRDFDG IQLVFDDMVLDSGENGASSLFNAYNRVIQYLAKAEKFEVAFCCFKKIQESGCIVDTGTYN SLITVFLNNGLPYKAFEIYENMEKAGCSLDASSYELMIPSLAKSGRLDAAFKLFQQMKVS NFRPGFGIFASLVDSMGKAGRLDTSLKVYTEMQGFGFRPSATMFVSLIESFVKAGKLETA LRLWDEMKKTGFRPNYGLYTMIVESHAKSGKLDVATSVFSDMEKAGFLPTPSTYSSLLEM HAASGQVDAAMKLYNSMTNAGLRPGLSTYTALLTLLAKKKLLDVSAKILLEMKAMGYSVD VNASDVLMVYIKDGSVDLALRWLRFMGSSAIRTNNFIIRQLFESCMKSGAYEQAKPLLET YVNSAAKVDLILYTSILAHLVRCQDENNERHLMSILSATRHKAHTFMCGLFTGPEQRKQP VLTFVREFFQGIDYELEEGASRYFVNVLLNYLVLMGQINRARCVWKVAYENKLFPKAIVF DQHIAWSLDVRNLSVGAALVAVVHTLHRFRKRMLYYGVVPRRIKLVTGPTLKIVVAQMLS SVESPFEVSKVVLRAPGDAVLDWFKKPIVQQFLLNEIPSRADILMHKLNILFPTSAPEIR SLSPPKPIFAGKAM*

Transcript Sequence

Transcript ID	Solyc08g078150.1.1
Transcript Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9HYB0_POPTR)
Sequence	ATGCTTCTGTTTTATAGAAACTTGAAACATACCCGGAACTTAATCGAAATTTATCGGAGT TATCATCCATTTCGGAACACTGCAGGGTCGTGCGATTTCAACGTCAAAGGACCTTACTTT TCTTCTAGATACTACTGTTCTGGGAAGAGCAGTGATGAATGGACTGAAGATGTAGAATAT CTGGATGAATCAGGGAGTGTCATTTACTCTGGGAAGGGAATAAGGTCGGTTGAGCCGGGG CTGGATGACCATGTAATGGTCGGTGGATTGAAAAAGCCTATTTTGAATGCTTCCGCAGTA GCAAAGCTTGTTGAGATAGTGAAGAGGTGGAGATGGGGACCTGAAATGGAGACCCAATTG GATAAGCTCCAGTTTATACCAAATATGACTCATATTATGCAAGCATTGAAAGTTATGGAA GATAGTGATGCTTCATTGAGTTTGTTTCGGTGGGCAAAGAGACAACCTTGGTATAAGCCA AATGATGCATGTTATATCACACTGTTTGATAAATTGAACCAAAGTAGAGATTTTGATGGA ATTCAATTGGTTTTCGATGATATGGTTCTTGATTCAGGCGAGAATGGGGCGTCGTCTTTG TTTAATGCGTATAATAGAGTCATCCAGTACCTAGCTAAGGCAGAGAAATTTGAGGTAGCA TTCTGTTGTTTTAAGAAAATTCAAGAGTCTGGTTGCATAGTTGATACCGGGACATACAAT TCCCTTATCACCGTGTTCTTAAACAATGGTTTGCCATACAAGGCATTTGAGATATATGAG AACATGGAAAAAGCCGGGTGTTCATTAGATGCATCGAGTTATGAGTTAATGATTCCAAGT CTAGCTAAGTCAGGACGCCTTGATGCAGCGTTCAAGCTCTTCCAACAGATGAAGGTGAGC AACTTCCGACCAGGTTTTGGGATCTTTGCCTCACTGGTTGATTCAATGGGTAAAGCTGGG AGGTTGGACACATCACTAAAGGTATATACTGAAATGCAGGGTTTTGGGTTCAGGCCATCT GCCACTATGTTCGTATCCTTGATTGAGTCTTTTGTGAAAGCTGGAAAACTAGAGACTGCT CTAAGGCTTTGGGATGAAATGAAAAAAACAGGGTTTAGACCTAACTATGGGCTGTACACC ATGATTGTTGAGTCCCATGCAAAATCTGGGAAGCTTGATGTTGCTACGTCTGTCTTCTCA GATATGGAAAAGGCGGGATTTTTGCCCACTCCGTCCACCTATTCTTCTCTCCTGGAGATG CATGCTGCTTCTGGTCAGGTAGATGCTGCAATGAAGCTTTATAACTCAATGACAAATGCA GGTCTGAGACCAGGACTGAGTACTTATACAGCCTTGCTAACCCTTCTTGCCAAAAAGAAG CTTCTGGATGTTTCTGCAAAGATTTTACTGGAAATGAAGGCCATGGGATATTCAGTTGAT GTGAATGCTAGTGATGTTTTGATGGTTTACATTAAAGATGGTTCTGTTGATCTTGCTTTA AGGTGGCTACGGTTTATGGGTTCATCAGCCATCAGGACAAATAATTTCATTATCCGGCAG CTTTTTGAATCATGCATGAAGAGTGGGGCGTACGAGCAAGCCAAGCCTCTCCTCGAAACA TATGTGAACTCTGCTGCCAAAGTTGACCTCATTCTTTACACTTCAATTTTAGCACATTTA GTAAGATGCCAAGACGAGAACAATGAGAGGCATTTAATGTCAATCTTGAGTGCTACAAGG CATAAGGCTCACACTTTCATGTGTGGGCTCTTTACTGGGCCAGAGCAGAGGAAACAACCA GTTTTAACTTTTGTAAGGGAATTCTTCCAAGGCATTGATTATGAGCTGGAAGAAGGAGCT TCAAGGTATTTTGTTAATGTTCTCCTCAACTATCTTGTTCTCATGGGACAAATAAATCGT GCTCGTTGTGTATGGAAAGTTGCCTATGAAAACAAGCTTTTCCCAAAGGCTATAGTGTTT GATCAACATATTGCCTGGTCCCTTGATGTTAGAAACTTGTCAGTGGGAGCAGCTCTCGTT GCCGTGGTACATACGCTTCATAGGTTTAGGAAACGGATGTTGTATTATGGTGTTGTCCCT AGGCGGATCAAATTGGTTACTGGACCAACTTTGAAAATTGTGGTGGCACAGATGTTAAGC TCCGTGGAATCTCCCTTCGAGGTTAGTAAGGTTGTTTTGAGGGCCCCAGGAGATGCGGTC CTGGATTGGTTTAAGAAACCAATTGTTCAGCAATTTCTTTTGAATGAGATTCCATCAAGG GCTGATATTTTAATGCATAAACTCAACATACTTTTTCCAACATCTGCACCTGAAATCAGG TCGTTGTCCCCTCCTAAACCTATTTTTGCTGGAAAAGCAATGTAG