Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g078140.3.1
CDS Infomation

Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** K4CNH3_SOLLC)
Sequence

ATGGCCGACATTGCTAAGAAATGGCTTCCTCTTGAAGCTAATCCTGATGTCATGAATCAG
TTTCTTTGGAGTCGTGGTGTTCCACCGGATGAGGTAGAGTGCTATGATGTTTATGGGTTG
GATGAAGAACTTTTGGGAATGGTGCCCAAGCCGGTCCTTGCTGTTTTGTTTCTCTATCCT
CTAACATCACAGAGTGAAGCAGAGAGAGTACAGCAAGACAGTGAAATAAAGGTGAAGGAC
CCCACCAGTACCATTTACTTCATGAAACAAACAGTGGGAAATGCATGTGGAACAATTGGT
CTACTTCATGCTATTGGGAATATTACCTCAGAGATAAAACTTGATGAGGGCTCATTTTTG
GACAAGTTCTTTAAATCAACTGCATGCATGGACCCGATGGAGCGTGCTTCATTCCTTGAA
AGTGATACAGAAATAGAGGTTGCTCATTCAGTAGCAGCTACTGCTGGTGACACTGAGGTT
CCAGTAAATGTGGACACCCATTTCATCTGCTTCACATGTGTTGATGGACAACTCTATGAA
CTTGATGGAAGGAAGTCCAGACCAATTTCACATGGTGCATCTACTCCAAGCAGCCTGTTA
CAGGATGCTGCTAAAGTTATACAAAAGATGATGCAAAAAAATCCAGACTCGATGAACTTC
AACATCATTGCCATATCGAAGAGAGTTAAAGGTGATGCTCCATGA

Peptide Sequence

PEP ID

Solyc08g078140.3.1
PEP Infomation

Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** K4CNH3_SOLLC)
Sequence

MADIAKKWLPLEANPDVMNQFLWSRGVPPDEVECYDVYGLDEELLGMVPKPVLAVLFLYP
LTSQSEAERVQQDSEIKVKDPTSTIYFMKQTVGNACGTIGLLHAIGNITSEIKLDEGSFL
DKFFKSTACMDPMERASFLESDTEIEVAHSVAATAGDTEVPVNVDTHFICFTCVDGQLYE
LDGRKSRPISHGASTPSSLLQDAAKVIQKMMQKNPDSMNFNIIAISKRVKGDAP*

Transcript Sequence

Transcript ID

Solyc08g078140.3.1
Transcript Infomation

Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** K4CNH3_SOLLC)
Sequence

ATGGCCGACATTGCTAAGAAATGGCTTCCTCTTGAAGCTAATCCTGATGTCATGAATCAG
TTTCTTTGGAGTCGTGGTGTTCCACCGGATGAGGTAGAGTGCTATGATGTTTATGGGTTG
GATGAAGAACTTTTGGGAATGGTGCCCAAGCCGGTCCTTGCTGTTTTGTTTCTCTATCCT
CTAACATCACAGAGTGAAGCAGAGAGAGTACAGCAAGACAGTGAAATAAAGGTGAAGGAC
CCCACCAGTACCATTTACTTCATGAAACAAACAGTGGGAAATGCATGTGGAACAATTGGT
CTACTTCATGCTATTGGGAATATTACCTCAGAGATAAAACTTGATGAGGGCTCATTTTTG
GACAAGTTCTTTAAATCAACTGCATGCATGGACCCGATGGAGCGTGCTTCATTCCTTGAA
AGTGATACAGAAATAGAGGTTGCTCATTCAGTAGCAGCTACTGCTGGTGACACTGAGGTT
CCAGTAAATGTGGACACCCATTTCATCTGCTTCACATGTGTTGATGGACAACTCTATGAA
CTTGATGGAAGGAAGTCCAGACCAATTTCACATGGTGCATCTACTCCAAGCAGCCTGTTA
CAGGATGCTGCTAAAGTTATACAAAAGATGATGCAAAAAAATCCAGACTCGATGAACTTC
AACATCATTGCCATATCGAAGAGAGTTAAAGGTGATGCTCCATGAGCGGAGAGTTTTATG
CCTGTGTATCTTTTGATCACATTTCTAATATAGAAAGAGCTAAAGATGGACTTATGTCAT
CACGTTTTGACATGGAACCATTTCCACTGCATACCTCGACTGAGATCCTTTTGTCTTTAG
CCACTCCACTCTGTTGTATAAAAATCAAAGACGCACTTGTTATACAAACCTTACACAAAA
AGTTGTAGCGCAAATGTTAAATCAGGTTTGCCTTAGAAATGAGCCGTTCCAGCATTACCA
ATTTACTGTCTAACAACATGGTGGTGCACTAGTGTGAATAGGGGTTCAAGTCCTGTACTC
A