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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g078000.3.1
CDS Infomation

Vesicle-associated protein 2-1 (AHRD V3.3 *** W9S0E2_9ROSA)
Sequence

ATGACTGGTGCTACAAACCAGTTTATATCTGTTAGTCCGGAGGAGCTCAAATTCCAATTT
GAGCTGGAGAAACAAAGCTACTGTGATCTTAAAGTTACAAACAGCACAGAGAGTTATGTT
GCTTTCAAGGTGAAAACTACTTCTCCTAAGAAGTATTTTGTTCGTCCAAACACGGGTGTT
ATACATCCTTGGGATTCATGTTTTATACGAGTCACCCTTCAAGCTCAAAAGGAGTATCCC
TCGGACATGCAATGCAAGGACAAGTTCCTCTTACAGAGCACCATTGTGAATAGTGATGCT
GAGGAACTTCCTCCAGATACTTTTAATAAGGATAGTGGAAGAAATGTAGAAGAGTGCAAG
CTTAGGGTTGTTTACATCTCTCCTCACTCATCTCCGGGACATTCTGAAGATGCGTTTAAA
CAAAGTTCTGATGGCAACTCTAGTCAAGCAGTGCAGCGTGCCAGAGATGAAAGAGATGCA
GTTTTCCGACAAACGCAGCAGCTGCAACAGGAACTGGAAGTGCTGAAGAGACAAAAAAGG
CGGAGAAGTGACGCAGGCTTCTCTCTAAAGTTTGCACTTCTGGTGGGACTCATTGGGTTA
ATGGCCGGGTTTCTGTTTAAACTGTTGATGTCTTCACCTTCTACAGAAACTGTTGATGTC
TAA

Peptide Sequence

PEP ID

Solyc08g078000.3.1
PEP Infomation

Vesicle-associated protein 2-1 (AHRD V3.3 *** W9S0E2_9ROSA)
Sequence

MTGATNQFISVSPEELKFQFELEKQSYCDLKVTNSTESYVAFKVKTTSPKKYFVRPNTGV
IHPWDSCFIRVTLQAQKEYPSDMQCKDKFLLQSTIVNSDAEELPPDTFNKDSGRNVEECK
LRVVYISPHSSPGHSEDAFKQSSDGNSSQAVQRARDERDAVFRQTQQLQQELEVLKRQKR
RRSDAGFSLKFALLVGLIGLMAGFLFKLLMSSPSTETVDV*

Transcript Sequence

Transcript ID

Solyc08g078000.3.1
Transcript Infomation

Vesicle-associated protein 2-1 (AHRD V3.3 *** W9S0E2_9ROSA)
Sequence

ATGACTGGTGCTACAAACCAGTTTATATCTGTTAGTCCGGAGGAGCTCAAATTCCAATTT
GAGCTGGAGAAACAAAGCTACTGTGATCTTAAAGTTACAAACAGCACAGAGAGTTATGTT
GCTTTCAAGGTGAAAACTACTTCTCCTAAGAAGTATTTTGTTCGTCCAAACACGGGTGTT
ATACATCCTTGGGATTCATGTTTTATACGAGTCACCCTTCAAGCTCAAAAGGAGTATCCC
TCGGACATGCAATGCAAGGACAAGTTCCTCTTACAGAGCACCATTGTGAATAGTGATGCT
GAGGAACTTCCTCCAGATACTTTTAATAAGGATAGTGGAAGAAATGTAGAAGAGTGCAAG
CTTAGGGTTGTTTACATCTCTCCTCACTCATCTCCGGGACATTCTGAAGATGCGTTTAAA
CAAAGTTCTGATGGCAACTCTAGTCAAGCAGTGCAGCGTGCCAGAGATGAAAGAGATGCA
GTTTTCCGACAAACGCAGCAGCTGCAACAGGAACTGGAAGTGCTGAAGAGACAAAAAAGG
CGGAGAAGTGACGCAGGCTTCTCTCTAAAGTTTGCACTTCTGGTGGGACTCATTGGGTTA
ATGGCCGGGTTTCTGTTTAAACTGTTGATGTCTTCACCTTCTACAGAAACTGTTGATGTC
TAAGAAAAACTCAAAGTCCCGTCGTTCATGGAATTATAGTTTTTCTTTTAGTTAACTGTA
AAATTTTTAGTGTTGGTGAACTGCTGTAGAGCTCGCTGGCTCTCTTCTTTCTTTGTAAAT
TGATCATTTTTATGATGTGATACCTTGTATTCATCCTCACCATTTTTCAGTTCATACATG
TTCTCTTTTTTCTTGAAAATTAACA