Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g077250.3.1
CDS Infomation

Inner nuclear membrane Man1 (AHRD V3.3 *** A0A0B0P5D6_GOSAR)
Sequence

ATGGCTTCCAGTCCTCGAACACGACCATCTTCTCAAAGCCCTAACCCTAAACCCACCAAA
AACAAAACTTCCTCTTCTTCTTCTGCTTCTCGTCCTTCTACATCATCCAGAAGTATTCCT
TTACAACCTTCCTCAAACTTATTCCCTTCCTCTAAATCAGAGTTTTCAAGGCTCATCGCC
GTCGTCGTCGTTGCCTCCGCCGTCGCATTTTCCTGCAACTATGTTTTCACCTATCTCAAT
AGCCAACCTAAACCTTTTTGCGACAGTAATTCCGGTTTCGACGATTCTCTCACCGACCTC
TGTGAGCCTTGTCCACTTAATGGAGTATGTCGTGAAGGCAAATTAGAGTGTGCTCATGGC
TACCGGAGGCTTGGGAACTTGTGTGTTGAAGATTCAAATATAAACGAAACAGCTAAAAAG
CTTTCAAAGTTAGTAGAAGGTCTCCTTTGTGAAGAACATGCTCAATATTCATGCACTGGC
ACTGGCACTATTTGGGTTCAAGGTAACCAATTGTGGGAGAAGGTGAATGAATCTAAAATA
ATGGATGAGTATGGATTGAACGAGGCTGTTTATGCTCATGCCATGAAAAGAGCAATGGAG
GCACTTCGCAAGGTTTTAGAGACAAGACTGAATGATCATGGAATTGAAGAGCTGAAGTGT
CCACCTTTGCTGGTCCTACATTATACACCAGTTTCCTGTCGCATCCAGCGCTGGATTCTT
GAGCATGCTTTGTTATTGGTTCCAGCTTGTTGGGTTTTACAGCTACTGGGATGCGTTTTC
ACATTGTTAAAACTCCGTCGGAGGTACCACTTGTCAGTTAAAGCGGAACATATATATAAT
GAGGCTTGTGATGTTCTTGAAGAGAAGGCAATGAGTGCAAGAAGTATGACTGGCGAGCAT
GAACCTTGGGTGGTGGCATCATTGTTACGTGATCATCTTCTATCGCCCAAGGAAAGAAAA
GATCCAATGTTATGGAAAAAGGTTGAGCAGCTGGTTCAAGAAGATTCTCGTCTAGAGAGA
TATCCAAAGATGGTAAAAGGTGAATGTAAGGTGGTCTGGGAGTGGCAAGTTGAGGGTTCT
TTAAGCTCTTCGGGCAAGAGGAAGAAGGCCAAGGAAATCAGGCTAGCATCAGGTCAACAT
ACAAATCTCTCTACTCAGCAAAGAAACTGGCCATGGAAGGCCAAGGAGCCTGTGAAATGC
TGA

Peptide Sequence

PEP ID

Solyc08g077250.3.1
PEP Infomation

Inner nuclear membrane Man1 (AHRD V3.3 *** A0A0B0P5D6_GOSAR)
Sequence

MASSPRTRPSSQSPNPKPTKNKTSSSSSASRPSTSSRSIPLQPSSNLFPSSKSEFSRLIA
VVVVASAVAFSCNYVFTYLNSQPKPFCDSNSGFDDSLTDLCEPCPLNGVCREGKLECAHG
YRRLGNLCVEDSNINETAKKLSKLVEGLLCEEHAQYSCTGTGTIWVQGNQLWEKVNESKI
MDEYGLNEAVYAHAMKRAMEALRKVLETRLNDHGIEELKCPPLLVLHYTPVSCRIQRWIL
EHALLLVPACWVLQLLGCVFTLLKLRRRYHLSVKAEHIYNEACDVLEEKAMSARSMTGEH
EPWVVASLLRDHLLSPKERKDPMLWKKVEQLVQEDSRLERYPKMVKGECKVVWEWQVEGS
LSSSGKRKKAKEIRLASGQHTNLSTQQRNWPWKAKEPVKC*

Transcript Sequence

Transcript ID

Solyc08g077250.3.1
Transcript Infomation

Inner nuclear membrane Man1 (AHRD V3.3 *** A0A0B0P5D6_GOSAR)
Sequence

CCTAAAAAGAATATTGTACAAACACTTTACTATTATTTCATGAACACAGAGAAGTCATTT
TTTGCGAAACTATTAACTTAAGTTCATCAAACTCAACTAAAGAAAGCATAACAAAGTCTA
AAAAAATCTACCGCAAAATAGTATAGTAATCAAAACACAATGTATCATAAAAGTTTTAAA
CGTACAAGGATTTACGACTAACACTACGACTCAAACTTAAATCTTTACAGAATAAGACAT
AAATCGAACTCCACTATTTATTAATCTTTTATTTTAATACAAATCTTTAACTCTTTCTTA
TTTAAAATTATATTTCAAACAATACGAAGTTACACCATACTATCCAATCTCTCACACGAA
ATCATGAGCATCTTAATATCTCCATCTCATTTTCCTTTTTTTTTAACTGTAATCACTCTC
ACCCTGTCTCGAATATTTTCGTCGATTTGCAAAAACTATTTTTAAGGGCAATCTAACCCT
AATGTTTAAACTTTGAGTTGTGTTCATCAATGGCTTCCAGTCCTCGAACACGACCATCTT
CTCAAAGCCCTAACCCTAAACCCACCAAAAACAAAACTTCCTCTTCTTCTTCTGCTTCTC
GTCCTTCTACATCATCCAGAAGTATTCCTTTACAACCTTCCTCAAACTTATTCCCTTCCT
CTAAATCAGAGTTTTCAAGGCTCATCGCCGTCGTCGTCGTTGCCTCCGCCGTCGCATTTT
CCTGCAACTATGTTTTCACCTATCTCAATAGCCAACCTAAACCTTTTTGCGACAGTAATT
CCGGTTTCGACGATTCTCTCACCGACCTCTGTGAGCCTTGTCCACTTAATGGAGTATGTC
GTGAAGGCAAATTAGAGTGTGCTCATGGCTACCGGAGGCTTGGGAACTTGTGTGTTGAAG
ATTCAAATATAAACGAAACAGCTAAAAAGCTTTCAAAGTTAGTAGAAGGTCTCCTTTGTG
AAGAACATGCTCAATATTCATGCACTGGCACTGGCACTATTTGGGTTCAAGGTAACCAAT
TGTGGGAGAAGGTGAATGAATCTAAAATAATGGATGAGTATGGATTGAACGAGGCTGTTT
ATGCTCATGCCATGAAAAGAGCAATGGAGGCACTTCGCAAGGTTTTAGAGACAAGACTGA
ATGATCATGGAATTGAAGAGCTGAAGTGTCCACCTTTGCTGGTCCTACATTATACACCAG
TTTCCTGTCGCATCCAGCGCTGGATTCTTGAGCATGCTTTGTTATTGGTTCCAGCTTGTT
GGGTTTTACAGCTACTGGGATGCGTTTTCACATTGTTAAAACTCCGTCGGAGGTACCACT
TGTCAGTTAAAGCGGAACATATATATAATGAGGCTTGTGATGTTCTTGAAGAGAAGGCAA
TGAGTGCAAGAAGTATGACTGGCGAGCATGAACCTTGGGTGGTGGCATCATTGTTACGTG
ATCATCTTCTATCGCCCAAGGAAAGAAAAGATCCAATGTTATGGAAAAAGGTTGAGCAGC
TGGTTCAAGAAGATTCTCGTCTAGAGAGATATCCAAAGATGGTAAAAGGTGAATGTAAGG
TGGTCTGGGAGTGGCAAGTTGAGGGTTCTTTAAGCTCTTCGGGCAAGAGGAAGAAGGCCA
AGGAAATCAGGCTAGCATCAGGTCAACATACAAATCTCTCTACTCAGCAAAGAAACTGGC
CATGGAAGGCCAAGGAGCCTGTGAAATGCTGAGCTTTTATCCTACAATTGTGCCGCGTGT
TTTTAGATTGTTGTATAGTAGTACCATTCATCTGGCAAAATGCAGTTCCCAGTGTCACGC
ACTTAGGTACATGATACACATCTCAGAATAGCCTTGTTAATCTAATTATTAGTCTTGTCT
GCATCAGAAAACACAAGAATTTTGTCAATAACACAATTCATGTGGAAGCTTCATTGTCCT
TTAAATGTGCTTTCTTTCTGTCACATTTCTGTATCACATTGTGTTTGATTTATGATTAGA
TACTATGATAGTTCTCCTCATGGACTTCACATAATGGACCTTGACTTTGATGGACAATTA
TGCCAGCTAGCTCAAGAATTAGTGTGGTTTTAGATTGGGTTCAACCCCACTTGACATGAC
AAGAAAATAAGACTCAAAATAAATTATGTATGCTTTGGTCTTCAGTCCATTTTGTTTCTC
AATTATCTCTACTTTCATAGAGTTCTATAATTGAATTCTAGAATCAATCAGGTGTTCGAT
ATCTGTGGTGACGCTTAATTCACACATTGTATGACTTATTTTTGAGGTAACACTTTTAAC
AATTCTTTATTTATATTTAAAGCTGAAATTT