Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g077230.3.1
CDS Infomation

two-component response regulator-like APRR2-like
Sequence

ATGATTTGCATTGAGAATGAATTATTGGGTTGGAAAGATTTCCCAAAGGGGCTTAAAGTC
CTACTTCTTGATGAAGATAGCAACTCTGCTGCTGAGATGAAATCAAGGCTTGAGAAAATG
GACTACATAGTCTACTCGTTCTGCAACGAGAGCGAAGCTTTGACTGCAATCTCAAGCAAA
TCCGAGGGCTTTCATGTTGCCATTGTGGAGGTAAGTGCAGGCAACAGTGATGGGGTTCTA
CGGTTTCTTGAAAGTGCCAAAGATCTACCAACTATAATGACATCAAATATACATTCTCTT
AGTACCATGATGAAATGTATTGCGCTAGGCGCAGTTGAGTTCCTTCAGAAACCATTGTCA
GATGATAAACTCAAAAATATATGGCAGCATGTAGTTCACAAGGCATTCAATACTAGAAAG
GATGTGTCCAAATCACTTGAGCCGGTAAAAGATTCTGTCCTCTCGATGCTGCAGTTACAA
CTAGAAATGGGTGAAGCAGATGACAAAAGTTCAAATGGAACAGAACCTCCCACTGCAGTA
GCGGAAAGCAATACTGAACAGTCATCGGGCTGTGATAAATACCCTGCTCCCTCAACCCCA
CAATTGAAACAAGGAGTGCGATCCGTCGATGATGGTGACTGCCATGATCATACTATCTTC
TCAACTGACCAAGACAGTGGGGAACATGATGCTGACACTAAATCCGTCGAAACTACTTAT
AACAATTCACTTGCTGAGAATAATGTCCAAACAAGTCCTACTGTACAGCAAGGAGATATT
ATTTTGAAAGAGGATAATGTTTCATCTCCTGATCTAAAGACGGAGACTGATATCGCTACC
ACTTCACGAAGTAACGACTGCCCTGACAATAGCATTATGCATTCTGCTGAACCTAGTAAA
GCATCTGGTCCTCATAGTTCAAATGGGACTAAATCCAATAGGAAGAAGATAAAGGTAGAT
TGGACACCTGAACTACACAAGAAGTTTGTTCAAGCAGTAGAGCAACTCGGTATAGATCAA
GCCATTCCTTCTCGAATACTGGACCTGATGAAAGTAGAGGGCTTAACGAGACATAACGTA
GCTAGCCATCTCCAGAAATACAGAATGCATCGAAAGCAAATTTTGCCAAAGGAAGTAGAA
AGAAGATGGCCTAATCCGCAACCAATAGATTCAGTCCAAAGAAGTTACTATCCTCATAAA
CCTATCATGACATTCCCACAATATCATTCTAATCATGTTGCCCCAGGTGGTCAGTTCTAT
CCTGCTTGGGTAACACCAGCAAGTTATCCGAACGGTTTACAAGTGTGGGGTTCACCTTAC
TATCCGGGATGGAAACCTGCAGAGACTTGGCACTGGACGCCTCGTCCAGAGCTGCATGCT
GATACATGGGGCTCCCCTATCATGTCACCGTCGCTTGGATCATATCCACCATATCCTCAG
AATGCTGGAGTGTACCGGCCACATGGAACACATAACAGATATAGCATGCTAGAGAAGTCG
TTTGATCTTCACCCGGCGGATGAGGTGATTGATAAAGTAGTAAAAGAGGCAATAACCAAA
CCATGGTTACCACTTCCTTTGGGCCTAAAAGCTCCTTCAACGGAGAGCGTTCTTGACGAA
CTTTCTAGACAAGGGATCTCAACCATTCCTTCACAAATCAACGACTCCCGTTGTCGGAGA
TGA

Peptide Sequence

PEP ID

Solyc08g077230.3.1
PEP Infomation

two-component response regulator-like APRR2-like
Sequence

MICIENELLGWKDFPKGLKVLLLDEDSNSAAEMKSRLEKMDYIVYSFCNESEALTAISSK
SEGFHVAIVEVSAGNSDGVLRFLESAKDLPTIMTSNIHSLSTMMKCIALGAVEFLQKPLS
DDKLKNIWQHVVHKAFNTRKDVSKSLEPVKDSVLSMLQLQLEMGEADDKSSNGTEPPTAV
AESNTEQSSGCDKYPAPSTPQLKQGVRSVDDGDCHDHTIFSTDQDSGEHDADTKSVETTY
NNSLAENNVQTSPTVQQGDIILKEDNVSSPDLKTETDIATTSRSNDCPDNSIMHSAEPSK
ASGPHSSNGTKSNRKKIKVDWTPELHKKFVQAVEQLGIDQAIPSRILDLMKVEGLTRHNV
ASHLQKYRMHRKQILPKEVERRWPNPQPIDSVQRSYYPHKPIMTFPQYHSNHVAPGGQFY
PAWVTPASYPNGLQVWGSPYYPGWKPAETWHWTPRPELHADTWGSPIMSPSLGSYPPYPQ
NAGVYRPHGTHNRYSMLEKSFDLHPADEVIDKVVKEAITKPWLPLPLGLKAPSTESVLDE
LSRQGISTIPSQINDSRCRR*

Transcript Sequence

Transcript ID

Solyc08g077230.3.1
Transcript Infomation

two-component response regulator-like APRR2-like
Sequence

ATAACCTCTCTCTTCTTGAATTCTGCTTATCTCTGTTTTCAACAGTCTCACTGTCTCCCC
TAAACCCCTTACCTGACCCCCCCTTCCCTTTTATCTTGTTTCATTCGACCCACCTAACTA
TAATCAACAAACGACCCTTAAAAGAAGAAAAAAAAACAAGAACAGATGAGCTAAGTCTTC
TTCATTTCCCAAGAGATACAGGATTGAATAGTTAATGACTGATTAAAAAGTGACCGAGTT
GGAGGGACTAAAAAGGATGCCTTTTTAGAAATGATTTGCATTGAGAATGAATTATTGGGT
TGGAAAGATTTCCCAAAGGGGCTTAAAGTCCTACTTCTTGATGAAGATAGCAACTCTGCT
GCTGAGATGAAATCAAGGCTTGAGAAAATGGACTACATAGTCTACTCGTTCTGCAACGAG
AGCGAAGCTTTGACTGCAATCTCAAGCAAATCCGAGGGCTTTCATGTTGCCATTGTGGAG
GTAAGTGCAGGCAACAGTGATGGGGTTCTACGGTTTCTTGAAAGTGCCAAAGATCTACCA
ACTATAATGACATCAAATATACATTCTCTTAGTACCATGATGAAATGTATTGCGCTAGGC
GCAGTTGAGTTCCTTCAGAAACCATTGTCAGATGATAAACTCAAAAATATATGGCAGCAT
GTAGTTCACAAGGCATTCAATACTAGAAAGGATGTGTCCAAATCACTTGAGCCGGTAAAA
GATTCTGTCCTCTCGATGCTGCAGTTACAACTAGAAATGGGTGAAGCAGATGACAAAAGT
TCAAATGGAACAGAACCTCCCACTGCAGTAGCGGAAAGCAATACTGAACAGTCATCGGGC
TGTGATAAATACCCTGCTCCCTCAACCCCACAATTGAAACAAGGAGTGCGATCCGTCGAT
GATGGTGACTGCCATGATCATACTATCTTCTCAACTGACCAAGACAGTGGGGAACATGAT
GCTGACACTAAATCCGTCGAAACTACTTATAACAATTCACTTGCTGAGAATAATGTCCAA
ACAAGTCCTACTGTACAGCAAGGAGATATTATTTTGAAAGAGGATAATGTTTCATCTCCT
GATCTAAAGACGGAGACTGATATCGCTACCACTTCACGAAGTAACGACTGCCCTGACAAT
AGCATTATGCATTCTGCTGAACCTAGTAAAGCATCTGGTCCTCATAGTTCAAATGGGACT
AAATCCAATAGGAAGAAGATAAAGGTAGATTGGACACCTGAACTACACAAGAAGTTTGTT
CAAGCAGTAGAGCAACTCGGTATAGATCAAGCCATTCCTTCTCGAATACTGGACCTGATG
AAAGTAGAGGGCTTAACGAGACATAACGTAGCTAGCCATCTCCAGAAATACAGAATGCAT
CGAAAGCAAATTTTGCCAAAGGAAGTAGAAAGAAGATGGCCTAATCCGCAACCAATAGAT
TCAGTCCAAAGAAGTTACTATCCTCATAAACCTATCATGACATTCCCACAATATCATTCT
AATCATGTTGCCCCAGGTGGTCAGTTCTATCCTGCTTGGGTAACACCAGCAAGTTATCCG
AACGGTTTACAAGTGTGGGGTTCACCTTACTATCCGGGATGGAAACCTGCAGAGACTTGG
CACTGGACGCCTCGTCCAGAGCTGCATGCTGATACATGGGGCTCCCCTATCATGTCACCG
TCGCTTGGATCATATCCACCATATCCTCAGAATGCTGGAGTGTACCGGCCACATGGAACA
CATAACAGATATAGCATGCTAGAGAAGTCGTTTGATCTTCACCCGGCGGATGAGGTGATT
GATAAAGTAGTAAAAGAGGCAATAACCAAACCATGGTTACCACTTCCTTTGGGCCTAAAA
GCTCCTTCAACGGAGAGCGTTCTTGACGAACTTTCTAGACAAGGGATCTCAACCATTCCT
TCACAAATCAACGACTCCCGTTGTCGGAGATGAGATGACATGTCATTCTAATTTTTTTTG
GGTCCCATAGTTGGTGCATGTCAAAAAAAAATAATAATCTCCAATTACTTGATGGACATA
TGTACCATGACATTACCCAGTGACCCGAGTGACCCACGCGTATGGCATTGACTCGACGGT
CAAAATCGAGTTGTTGTAAATAATGGACCCAAATATGGGTTTTCCCTTTTTTGTTGGCCC
AATTTTAGATGTTTGGGCCGATGAGTGTGCTCCATTAATTTCTTTGGAAAATAATGAATA
AACCATTCTTAGTTTATGGGTTATAAATCCAAATTCTTTTT