Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g076990.3.1
CDS Infomation

Acetylornithine deacetylase (AHRD V3.3 *** ARGE_ARATH)
Sequence

ATGACTACTACAGCTTCTGTTAAGCAGATTTTGGGCGATCTAAACAAGGATTCATTCGTA
ACCCTTTTGGGGAAACTGATCGGCGAGTCCAAATATGTACAGAACAATCCGCCGGAGCTT
ATCCCGGAGGAAGACAGGATTGTGAATCACGTTCTTGATACACTTCTTCCTTATAGCACC
ACCACCGGCGGCGGACCATTGATCATCAATCATGTTACGTATAAGCCTAATAGGGGTAAT
CTTATTGTGGAGTACCCGGGTACTCAGCCCGGGAAAATCTTGTCTTTTGTTGGAATGCAT
ATGGATGTTGTCACTGCCAATCCTGATGATTGGGAATTTGATCCCTTTTCATTGAGCATT
GATGGTGATAAACTTCGAGGACGTGGAACTACTGATTGTTTAGGTCATGTGGCTCTTGTA
TCCGAGCTTATGAGGCGTCTTGGGGAGACAAAGCCACAGTTGAAATCCACGGTGGTTGCT
GTCTTCATAGCCAGTGAAGAGAACTCATCTATCCCTGGGGTTGGTGTGGATGCATTAGTG
AAGGATGGATTGCTTGATAAGTTAAAGAAAGGCCCTCTATTTTGGATTGACACAGCAGAT
AAACAACCATGCATTGGTACCGGTGGCAGTATACCGTGGAAACTTCATGTAACTGGAAAG
CTTTTTCACAGTGGTCTCCCCCACAAGGCTATCAATCCTCTGGAGCTTGCTATGGAAGCA
CTGAAAGAAATTCAGTCCCGCTTCTATAGAGATTTCCCTGCGCATCCAAAAGAACAAGTC
TATGAATTTGCTACACCATCGACCATGAAACCAACTCAGTGGTTTTATCCTGGGGGTGGA
ATCAACCAAATTCCTGGTGAGTGCACTGTTTCTGGAGATGTTAGGTTGACTCCATTTTAC
AGTGTATCAGATGCTATGAAGAAATTACAAGAATATGTTGATGATTTGAATGCCAACATT
GAAAAACTTGATGGTCGAGGTCCTGTTTCAAAATATGTTCTGCCAGATGAGAACTTAAGG
GGCAGAATCACTATAACTTTCGACGAAGCTTCGTCTGGAGTTGCTTGTGATCTCAATTCT
CGGGGATTTCATGTACTATGCAAAGCTACCAAAGAGGAAGTTGGGCATGTAAAACCATAT
TCTATAACTGGTACTCTGCCATTGATAAGAGATCTACAGGACGAGGGTTTTGATGTTCAA
ACTTCTGGCTACGGCTTAATGGCTACATACCATGCAAAGAATGAATATTGTCTACTGTCT
GATATGTGCCAAGGTTTCCGGGTCTTTGCAAGCGTCATCGCTCAGTTGGAAGATTGA

Peptide Sequence

PEP ID

Solyc08g076990.3.1
PEP Infomation

Acetylornithine deacetylase (AHRD V3.3 *** ARGE_ARATH)
Sequence

MTTTASVKQILGDLNKDSFVTLLGKLIGESKYVQNNPPELIPEEDRIVNHVLDTLLPYST
TTGGGPLIINHVTYKPNRGNLIVEYPGTQPGKILSFVGMHMDVVTANPDDWEFDPFSLSI
DGDKLRGRGTTDCLGHVALVSELMRRLGETKPQLKSTVVAVFIASEENSSIPGVGVDALV
KDGLLDKLKKGPLFWIDTADKQPCIGTGGSIPWKLHVTGKLFHSGLPHKAINPLELAMEA
LKEIQSRFYRDFPAHPKEQVYEFATPSTMKPTQWFYPGGGINQIPGECTVSGDVRLTPFY
SVSDAMKKLQEYVDDLNANIEKLDGRGPVSKYVLPDENLRGRITITFDEASSGVACDLNS
RGFHVLCKATKEEVGHVKPYSITGTLPLIRDLQDEGFDVQTSGYGLMATYHAKNEYCLLS
DMCQGFRVFASVIAQLED*

Transcript Sequence

Transcript ID

Solyc08g076990.3.1
Transcript Infomation

Acetylornithine deacetylase (AHRD V3.3 *** ARGE_ARATH)
Sequence

GTGTGAAAAGTAGGATTTGTTAAAACATCAAACTTCTTCCCCTAGGTTTGCTCTGTTCCG
AAAATAAGGCATCAGCTCACTACAATGACTACTACAGCTTCTGTTAAGCAGATTTTGGGC
GATCTAAACAAGGATTCATTCGTAACCCTTTTGGGGAAACTGATCGGCGAGTCCAAATAT
GTACAGAACAATCCGCCGGAGCTTATCCCGGAGGAAGACAGGATTGTGAATCACGTTCTT
GATACACTTCTTCCTTATAGCACCACCACCGGCGGCGGACCATTGATCATCAATCATGTT
ACGTATAAGCCTAATAGGGGTAATCTTATTGTGGAGTACCCGGGTACTCAGCCCGGGAAA
ATCTTGTCTTTTGTTGGAATGCATATGGATGTTGTCACTGCCAATCCTGATGATTGGGAA
TTTGATCCCTTTTCATTGAGCATTGATGGTGATAAACTTCGAGGACGTGGAACTACTGAT
TGTTTAGGTCATGTGGCTCTTGTATCCGAGCTTATGAGGCGTCTTGGGGAGACAAAGCCA
CAGTTGAAATCCACGGTGGTTGCTGTCTTCATAGCCAGTGAAGAGAACTCATCTATCCCT
GGGGTTGGTGTGGATGCATTAGTGAAGGATGGATTGCTTGATAAGTTAAAGAAAGGCCCT
CTATTTTGGATTGACACAGCAGATAAACAACCATGCATTGGTACCGGTGGCAGTATACCG
TGGAAACTTCATGTAACTGGAAAGCTTTTTCACAGTGGTCTCCCCCACAAGGCTATCAAT
CCTCTGGAGCTTGCTATGGAAGCACTGAAAGAAATTCAGTCCCGCTTCTATAGAGATTTC
CCTGCGCATCCAAAAGAACAAGTCTATGAATTTGCTACACCATCGACCATGAAACCAACT
CAGTGGTTTTATCCTGGGGGTGGAATCAACCAAATTCCTGGTGAGTGCACTGTTTCTGGA
GATGTTAGGTTGACTCCATTTTACAGTGTATCAGATGCTATGAAGAAATTACAAGAATAT
GTTGATGATTTGAATGCCAACATTGAAAAACTTGATGGTCGAGGTCCTGTTTCAAAATAT
GTTCTGCCAGATGAGAACTTAAGGGGCAGAATCACTATAACTTTCGACGAAGCTTCGTCT
GGAGTTGCTTGTGATCTCAATTCTCGGGGATTTCATGTACTATGCAAAGCTACCAAAGAG
GAAGTTGGGCATGTAAAACCATATTCTATAACTGGTACTCTGCCATTGATAAGAGATCTA
CAGGACGAGGGTTTTGATGTTCAAACTTCTGGCTACGGCTTAATGGCTACATACCATGCA
AAGAATGAATATTGTCTACTGTCTGATATGTGCCAAGGTTTCCGGGTCTTTGCAAGCGTC
ATCGCTCAGTTGGAAGATTGATCTGAGGTTTGATTACATCACAATTCAGAGACTGGTTGA
CAGAATTAGGTTTATGATAAAGTAGAACTCTTTCACTGATGACTCCTGTTATAAATGTTG
CTGGTTCTTTGTTGAATCTGTGACTAATTTAAGTACTTGAGCTGACGTTTTAACTTATAC
TTGAAGTAAATTTTAGCTTTGTTAAAACTAAATCCCCAGCATTACAGTATCATGTGTTTG
TCATTAGTCTTTTGCGCGTTCAGAATCTATGAAATAGTTTGCTCTATTTTGATATTAACA
TCTAATCTGCTTTAAATA