Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g076590.3.1
CDS Infomation

SolycHsfA1c
Sequence

ATGGACGCCGGAGGAGGTTCTCCGGTGCCGGAAATAACACCGGCGCCGATGCCTAGCTCA
AATGCGGTACCACCTTTTTTGATGAAGACTTATGATATGGTTGATGACCCGAGTACTGAC
AAGATTGTTTCGTGGAGTCCTACCGATAGTAGCTTTGTGATTTGGGATCCACCGGAGTTC
GCCAAGCAGTTACTGCCCAAGTATTTTAAGCATAGTAACTTCTCCAGCTTCGTTCGTCAG
TTGAACACTTATGGCTTTAGAAAGGTTGGTTCCGACCTCTGGAAATTTTCTAATGATGGA
TTCATAAGAGGTCAAAAGCATCTGCTTAAAAATATTAGCAGGCGCAAGCCTGCTCATGGA
CAGCAGCAGCAGCAGCAGCTGCATAGTCAGAGTGCGTCAGTTGGGGCTTGTGTCGAGGTT
GGAAATTTTGGGCTTGAGAAAGAGGTTGAGTGGCTGAAAAGGGACAAGAATGTGCTTATG
CAAGAGCTGGTTAAGCTGAGACAACACCAGCAGACTACTGATAATCAGATGCAAAACATG
GTGCAGAACCTTCAGATTATGGAGCAGCGGCAGCAACAGATGATGTCTTTCCTGGCAAAA
GCTGTTAACAGCCCTGGATTCTTTGCACAGTTTGTACAGCAGCAAAATGACAACAATAAG
CGCAAGATGGAAGGAAAGAAGAAACGCAGGATTAGACAAGATTTTCCTTCAGATGATCAT
TCTGTTAGGCCTGCTGATGGACAGCTTGTGAAGTACCACCCTATAATGAATGAGACAGCG
AAAGGAATGCTCACACAGATAACAAAACTAGATTCTTCTCCTAGGTTAGAGAACTTCAGC
AACAGTCCTGAAAGTCCACCGATTGGTGATGCATTTGATGGCAGAAGTAACAGTCGAATT
TCAGGAGTCACTCTTCAGGAAGTTTCACCTGCTTTTTCGCAGCCGTTTGCAAGTACAACT
TCAGCTATTGCAGGACAAAGTTCATTGTCTGCCAACATTCAGTTTTCAGAGAGCAGTTCC
CCAATTGGAGCTCAAAATTTGCCACCTATTGTACCGTTTTCATCAGATATGATTATGCCT
ATGCCCTCACAGTTACAAGAAATTGTGCCTGAAAACAATATGGATATTAATGGAACAGAG
AGGGGCAATGATTCTTTCATGGATCCCACATTGTGGGGAAACGGAGAACTGCCATTGGAA
AATGATATTTTCCCCCCCGACCTTCAAATCAAGTGGGAAAGTGCTTTGGTTGACGATATT
GGAGAGCCTCCTACTGTTACTGATCCCTCCTGGGAAAAGTTTCTTCAAAGCCTATACCCT
CCTACTGAGACAGAGGAGATGGGTTCGGTTGAAACAGAAAATGATAAGACTACTGAAACA
GAGCTGCTAGGAAATGGATGGTACAATGTTCAGCATATGGAACATCTTACTGAGCAAATG
GGGCTACTAACATCAAACACTAAAAAAGTATGA

Peptide Sequence

PEP ID

Solyc08g076590.3.1
PEP Infomation

SolycHsfA1c
Sequence

MDAGGGSPVPEITPAPMPSSNAVPPFLMKTYDMVDDPSTDKIVSWSPTDSSFVIWDPPEF
AKQLLPKYFKHSNFSSFVRQLNTYGFRKVGSDLWKFSNDGFIRGQKHLLKNISRRKPAHG
QQQQQQLHSQSASVGACVEVGNFGLEKEVEWLKRDKNVLMQELVKLRQHQQTTDNQMQNM
VQNLQIMEQRQQQMMSFLAKAVNSPGFFAQFVQQQNDNNKRKMEGKKKRRIRQDFPSDDH
SVRPADGQLVKYHPIMNETAKGMLTQITKLDSSPRLENFSNSPESPPIGDAFDGRSNSRI
SGVTLQEVSPAFSQPFASTTSAIAGQSSLSANIQFSESSSPIGAQNLPPIVPFSSDMIMP
MPSQLQEIVPENNMDINGTERGNDSFMDPTLWGNGELPLENDIFPPDLQIKWESALVDDI
GEPPTVTDPSWEKFLQSLYPPTETEEMGSVETENDKTTETELLGNGWYNVQHMEHLTEQM
GLLTSNTKKV*

Transcript Sequence

Transcript ID

Solyc08g076590.3.1
Transcript Infomation

SolycHsfA1c
Sequence

ACAAACTACTTTCTCTCTCCACTTTAATACCCAATCGTCTTTCTCTCTCTAAAACTTAGT
TTTTCTTCTTCCAATTTTCCGTCCTAATCCCCAAAACCCTGTGTATTTGTGAATTTATAT
ATGATCAGCGTTGTGTTAAGTAATTGAAAATTTAATTTCTTCGTTTAGGAATAGGTTCTA
ATTCAATGGACGCCGGAGGAGGTTCTCCGGTGCCGGAAATAACACCGGCGCCGATGCCTA
GCTCAAATGCGGTACCACCTTTTTTGATGAAGACTTATGATATGGTTGATGACCCGAGTA
CTGACAAGATTGTTTCGTGGAGTCCTACCGATAGTAGCTTTGTGATTTGGGATCCACCGG
AGTTCGCCAAGCAGTTACTGCCCAAGTATTTTAAGCATAGTAACTTCTCCAGCTTCGTTC
GTCAGTTGAACACTTATGGCTTTAGAAAGGTTGGTTCCGACCTCTGGAAATTTTCTAATG
ATGGATTCATAAGAGGTCAAAAGCATCTGCTTAAAAATATTAGCAGGCGCAAGCCTGCTC
ATGGACAGCAGCAGCAGCAGCAGCTGCATAGTCAGAGTGCGTCAGTTGGGGCTTGTGTCG
AGGTTGGAAATTTTGGGCTTGAGAAAGAGGTTGAGTGGCTGAAAAGGGACAAGAATGTGC
TTATGCAAGAGCTGGTTAAGCTGAGACAACACCAGCAGACTACTGATAATCAGATGCAAA
ACATGGTGCAGAACCTTCAGATTATGGAGCAGCGGCAGCAACAGATGATGTCTTTCCTGG
CAAAAGCTGTTAACAGCCCTGGATTCTTTGCACAGTTTGTACAGCAGCAAAATGACAACA
ATAAGCGCAAGATGGAAGGAAAGAAGAAACGCAGGATTAGACAAGATTTTCCTTCAGATG
ATCATTCTGTTAGGCCTGCTGATGGACAGCTTGTGAAGTACCACCCTATAATGAATGAGA
CAGCGAAAGGAATGCTCACACAGATAACAAAACTAGATTCTTCTCCTAGGTTAGAGAACT
TCAGCAACAGTCCTGAAAGTCCACCGATTGGTGATGCATTTGATGGCAGAAGTAACAGTC
GAATTTCAGGAGTCACTCTTCAGGAAGTTTCACCTGCTTTTTCGCAGCCGTTTGCAAGTA
CAACTTCAGCTATTGCAGGACAAAGTTCATTGTCTGCCAACATTCAGTTTTCAGAGAGCA
GTTCCCCAATTGGAGCTCAAAATTTGCCACCTATTGTACCGTTTTCATCAGATATGATTA
TGCCTATGCCCTCACAGTTACAAGAAATTGTGCCTGAAAACAATATGGATATTAATGGAA
CAGAGAGGGGCAATGATTCTTTCATGGATCCCACATTGTGGGGAAACGGAGAACTGCCAT
TGGAAAATGATATTTTCCCCCCCGACCTTCAAATCAAGTGGGAAAGTGCTTTGGTTGACG
ATATTGGAGAGCCTCCTACTGTTACTGATCCCTCCTGGGAAAAGTTTCTTCAAAGCCTAT
ACCCTCCTACTGAGACAGAGGAGATGGGTTCGGTTGAAACAGAAAATGATAAGACTACTG
AAACAGAGCTGCTAGGAAATGGATGGTACAATGTTCAGCATATGGAACATCTTACTGAGC
AAATGGGGCTACTAACATCAAACACTAAAAAAGTATGATCAGTCACCGAGAAGATGTACC
TGAGTAATGGTTAGGTGGTAATTTCCAGTTCTTCTAGTAAGAGTAGTTTCTTCAGCAAGT
TGTATGTAGTTGGATGGCAGAAACTCGCCGGAGGACAACAAGGATTTCGTGTTGTTCTTT
TTTGGTAACTTTACATTTCCAAAAGACGAAATACGTATACGATGTGGAGAAAATCCGTGT
ATTTTTTTTTTTGGTAACTTTTGCATTTACAAAAGACGAAATTCACACTGCAAAGGATAA
TTTCTTGCTGTAAAGTGCAAATAATAGTAACTTCTTTTGGAATATCAGAGTTTCAAATTT
TGTGAAATATGTACAAGTGATTATTCAAATTTAAAAGAAAAAACAAAAACCGAGTATTTA
TAGGATATAAATATAATATACATACATTATATACAAGTATTTGACAACCAATTCAACCGT
CCACTAGAATAGACTAAAACTGTGATTGGAAATCTAAGTCTACCAACGTTCGTAGCGAAA
TAAACCGTTCCTAATAAATCGCAAGTGTGGAATAAAAGAATCAAATACGAAATAACCTCA
TAACATGGTGATACTAAACATCTACCAAAACAACGTAAGATTGGAAAAACTGATGCAACT
CTACGTCTAAAATAAGACATAAAACATAGTCTTACAATCCAATTTTGTTGAGGAGAAAAC
ATATCATATTCTTTTTTGTCAATATAGATCCATCTATTAGTAAATAAGAGTATCTATACT
CGTTATCGCTCGTCTGGGCTAAGTAGTTACATTAGGAGTACAATACACATTTATATCTGA
AACGGAAAGGATAATTTCCTGAATCTAACAAAATCTCATATGGAATTCACGCTTCTGGAA
AATCATTAGAGCAAAAATTAACAGTAAAAAATTATTCGTACAAATAATGCACAAGAAAAC
ATTCCTCATTTTAATGTGGCCGCCAACTTAGATTTCTGCTTTCCAACTTCTACATGTTTG
TGAAGGCGTCCTGTAAATGCACAGTAGTAATGCATCAAGTACACTATCATAATGTCACCT
AAATGAAAAGAAGATTATCACCAAGTTTCCTAAATGAACGATGCTGTCATTTTTGCTATT
CGTGAGCTACCTGGCCTAGAAATCCTGTGAATACGAGACCTAGGTCCATCAAA