Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g076410.3.1
CDS Infomation

Shikimate kinase (AHRD V3.3 *** A0A151RA83_CAJCA)
Sequence

ATGAGTTTGCTTCTCTTTTCCGACCAATTTGTGGAACTTATGCAGTTTTCAGATGGCTCC
TCTGAGGTGGAGCTAAGATTAGAACTTGGGCAGGGAGATGTAACTCCTAAGGATATATAT
GTAGATGCAAATGAGAGCTCATTAGCAATTAGAGTACAGCAATCTGGAATTGTTCGGACT
CTCATGGAAACCAGTACTCTGTACATAGATGAAGATCAATTAGTAATTAGCTTGAAGAAG
CAAAACTCCGAGTTGAAATGGCCTGACATTGTGGAGTCTTGGGAGTCCCTAAGTGCTGGA
ATTACACAACTCCTTAGAGGAACATCAATATACTTAGTTGGGGAATCTACTGAAATCAAC
CAGAGGATTGCTCGAGAACTGGCTGTTGGACTAGGGTACACTCCACTTTGTACAAAGGAG
CTGCTAGAAACATATGCCAAGCAATCAATGGAAACGTGGGTTAATGAGGAGGGGTCTGAT
GCTGTAGCAGAAGCAGAAAGTGCTATACTAGAGAGTCTGAGTAGCCAAGCCCGTGCTGTT
ATTGCAACCTTGGGAGGGAAGAAAGGCGCTGCTGGAAGAGTGAACCAATGGAGGCATCTT
TTTGCTGGATTCACAGTCTGGCTTTCCCTTTCTCAAGCTACAGATGAAGAATCTGCAAAA
GAGGAGGCAAAAAGGAATATGCAAGATAGTGGTCGTGGTTACTCTAACGCGGAAGTGGTA
GTCAAGCTTGGAGGTTGGGATCCTAACTATTCAAAAGCAGTAGCTCAGGCTGTGCTTAGT
GCCCTTAAGCGCTTAATATTGGCAGATAAAGACCTTCCAGGGAAAAAGAGTTTATACATA
AGGTTGGGCTGCCGAGGTGATTGGCCAGACATCAAACCCCCAGGCTGGGATCCATCAACG
AGCCTTGATGCATCTTCTCCGCGGTCATAA

Peptide Sequence

PEP ID

Solyc08g076410.3.1
PEP Infomation

Shikimate kinase (AHRD V3.3 *** A0A151RA83_CAJCA)
Sequence

MSLLLFSDQFVELMQFSDGSSEVELRLELGQGDVTPKDIYVDANESSLAIRVQQSGIVRT
LMETSTLYIDEDQLVISLKKQNSELKWPDIVESWESLSAGITQLLRGTSIYLVGESTEIN
QRIARELAVGLGYTPLCTKELLETYAKQSMETWVNEEGSDAVAEAESAILESLSSQARAV
IATLGGKKGAAGRVNQWRHLFAGFTVWLSLSQATDEESAKEEAKRNMQDSGRGYSNAEVV
VKLGGWDPNYSKAVAQAVLSALKRLILADKDLPGKKSLYIRLGCRGDWPDIKPPGWDPST
SLDASSPRS*

Transcript Sequence

Transcript ID

Solyc08g076410.3.1
Transcript Infomation

Shikimate kinase (AHRD V3.3 *** A0A151RA83_CAJCA)
Sequence

ATGAGTTTGCTTCTCTTTTCCGACCAATTTGTGGAACTTATGCAGTTTTCAGATGGCTCC
TCTGAGGTGGAGCTAAGATTAGAACTTGGGCAGGGAGATGTAACTCCTAAGGATATATAT
GTAGATGCAAATGAGAGCTCATTAGCAATTAGAGTACAGCAATCTGGAATTGTTCGGACT
CTCATGGAAACCAGTACTCTGTACATAGATGAAGATCAATTAGTAATTAGCTTGAAGAAG
CAAAACTCCGAGTTGAAATGGCCTGACATTGTGGAGTCTTGGGAGTCCCTAAGTGCTGGA
ATTACACAACTCCTTAGAGGAACATCAATATACTTAGTTGGGGAATCTACTGAAATCAAC
CAGAGGATTGCTCGAGAACTGGCTGTTGGACTAGGGTACACTCCACTTTGTACAAAGGAG
CTGCTAGAAACATATGCCAAGCAATCAATGGAAACGTGGGTTAATGAGGAGGGGTCTGAT
GCTGTAGCAGAAGCAGAAAGTGCTATACTAGAGAGTCTGAGTAGCCAAGCCCGTGCTGTT
ATTGCAACCTTGGGAGGGAAGAAAGGCGCTGCTGGAAGAGTGAACCAATGGAGGCATCTT
TTTGCTGGATTCACAGTCTGGCTTTCCCTTTCTCAAGCTACAGATGAAGAATCTGCAAAA
GAGGAGGCAAAAAGGAATATGCAAGATAGTGGTCGTGGTTACTCTAACGCGGAAGTGGTA
GTCAAGCTTGGAGGTTGGGATCCTAACTATTCAAAAGCAGTAGCTCAGGCTGTGCTTAGT
GCCCTTAAGCGCTTAATATTGGCAGATAAAGACCTTCCAGGGAAAAAGAGTTTATACATA
AGGTTGGGCTGCCGAGGTGATTGGCCAGACATCAAACCCCCAGGCTGGGATCCATCAACG
AGCCTTGATGCATCTTCTCCGCGGTCATAACTCATAGCAGAATCACAGTATATGTATCTA
AATGAAGCTATTTTTCTCTACCCTTAGGCTCTTGTATCAATGTATCAAAATTAAAAAACA
TTCTTCTTGAGGATATCAAGTTGGATATTCTCAACATGATCTTTCTATATTAAGGGAAAG
AAAAGACTAAGGTCCTGGCGTGTATTAATTGTCCAGAAAGTTGCCATTGAGCCCCGAAGG
CCATCTGGTTAGTCAGAATTTTTTTATGGAAGATGGTCAATTTTGTATGCTGTGAATAAT
TGCCACAAATGTTGCTTATATTCATTCTTTATTCTAATACAGTAACACCTTTTTCATTGT
TGTGACTGCATTAGTGAGGTGTTCTTACATACGTATAATATATTTATATCTAATGTTTAC
ATATCACTTAGCAAAACGAAAGAATGTATTATTAACCAATTCAACCAAATGAATATATGG
ATGTAAAGAATAACAATATTTTTTCCCCGTGAAATTTATCTGCATAATTGATGAGCATAC
GTTAAATACAATTCTCCTGAACTTAAAAATTATGTGAAAAAGATTAAACTTGATTTTCAT
GGATATTCTAACATTTCATTTTTATACAAAATATTTGAGTAGTTATTAAGGAATAATTTC
GCGCAGAGTGTACCACTTACTATATGCAGTATACATGAAAATCGATTCTAGAGAAATTCA
TATTGTACCAGTGAAATATTACAAGTTCATACCAGAAGGCTATTATAACAATGTTCAAGA
ATTTTTAGGCAAGTGAATTAGAAACATAATAATGCGAAAACTCAAAGGAAAAATTTCACC
CCTCAGCTTCAAAGTGATAACAGTACAATGCCTAAGTTTTTGTTAAAATACAACGCCACC
GATGTTTGCTACAGTTTTATTCTCTTCAAACCATGATTAAACCGACTAGCAGCACTTTCA
AGATGCCAACCTAAAACCAATTTAAGCTCCAGTAACTCCTGCTGTGCACCAATTATTGCC
ATCACAGACGGGAGAGAATTGGAAGTCGCATATATAGAAGAACAGAAGGTGCAAGTCTAG
ACATAACACCAAAAACAAAGAGAGATAGAGAGAAGAGGACGACGCTTGATTGGTAAAAGT
GGACTCTTCGCCACCACGCAGCGATCCACCCTTGCTGGTACAGCCTCAACAATTACTCTC
CCCACTCGGCACATTCAGAAAGCATGGAGATGCGGAAGGCGGCTGCAAACATAAAGAACA
AACTTCTAAAGGCCCCATGCATAAGCCCATAGTTCATAATTGTAGATACTACCTCTTTGG
AAGCGGCAAGCCAAGCATGCCGAACATTGGATTTCCCACGATACTTTTGAGTTATCTCAG
CCTGCTTCTCAAACAGTTCCAAGCGATTTCTCATATATTTACTTGAGCATTGACTAATTT
TGACTATATCCACCATATAGATGGTATTCATTCCCTTAACAAACATAGTTTTAACCGATT
CTGCATCCACCAACTTAAGTGTATCTTCTAATATAGGAGACAGACTTTCCTGATCCTGTT
GATTTTCTGCCACTACTTCCATTTTAGGATATGATTTTTGATCAACAGCAAATTGTTGAT
TATCTTTTAAAGGATCGACTTTAATCCTTTTAACACGGACATTTGACTCTTCCATACCTT
CATCCAATTTGCAATTGTTCGGTCCATTAATATCTATTTCAAGATGCAACTTGATATTAG
TAGCCCTATCTGGCTCAGCAGCACTGAATCCTTCAGTTCTCTGCGATTGTATCTCAATGT
TGTCGTGCGCTTTACAACTAACGAGACATAAATCAGGGAAGAAACAGCCACCTGCTTCGT
CTATCCAGGCAATAGGTTTCTCCAATCCGGTAACCAAATTTACCTGAACCATATATAGAA
TATCAAGTATTACATGAAAGCCACCAAAGTTCACCTCAATCACAGCCTTCTTTGCACGGA
AATCTTCTTTGACAATACGAACAATATCTTGAGGGAAATCATTCCATTCACCATTCTGAT
GATATAAAACACGTTGTGGCAGTCCACTTTTAATGAAATTTGAGTAGTTCTTAACTGTCG
ATTTCCTGAGATGTGATCTGCAATTAGTTTCACCTTCCACAGTCCTCTTCCTCTTACCAA
GCGTGCTATAAAATGAGCTACAATTTGGTTGAAATGATAGCTCCTCCAGCTTCTCAGTGC
CAGCTCCAACTATACGTGCCACGTACTGAGACGCTACTTTACTTTTTGAGTCGACGTCAG
CTGTCCTACGGTCATTATCTAACACTTCAACCCAGTTTGACTCCATTTATCTACAGGCAA
CTACTATTTACAAATTTCTAACAGAAAGACTAAATCCTAAACTAGTATAGCACAGGTCTG
TCATAACAAATTTCTGAGAAGCCGCATCATGGAGAACGAAATGCAAAACCTGGCAGGAGA
AAGACATTTAGAAAGTCATTCATTCGAAAAAAATGGATAAGGATTTCTTCATATGAGCAG
AACGATACTCGCATAAAAGAACATGTCATAGTTAAAAGTTACATAGCTAAGGTAAACTAA
CACTAACTGAACTGAATCCAGCAATAGAAGTAAATTTCATGTTTTTTGGTGTGCGAAACA
AAAGGAAATATTTTTCGCACTCTTGTGAAATAGAAGTGAATTTCATGCCTAAATGCATAT
TTTTCGCACTCTTGTGAAATAGAAGTGAATTTCATGCCTAAATGCATATAACTATGTGCC
AAATTTATTTACTTCCTGTAAGAGTGAATCTCTCCGTAAAATCAGTAAATTGTTCTGATG
CTTATGGAATGTAGCTAGCCTATAAAAACCTACCAAATTCTGCAATGAGTGGCCATCTCG
GTAGAAGCACGTTCTCTCCATAATGTTGATGTCAAGTCAACAAATTTCCCTTTGTACAAA
GGTAACTTACGCGCTAATTTAATTCACCTCCTCTGAAAAACATAATTTTTGTTAGCATTG
AAAGACAAAAAGATGCACATAAAAATGCCAAACCCAAATTTCCAGATAAATTAAATAAAT
AAAGAAAAAAGGAACTAAGGTCTATCACTATCTTTCTAGCAAACAAATAAAGATTAGCAT
TACACTTAAATCTCTTACTTGCTCTGAAAACTTCAGCTAATATTCAACCGTGAACAAACA
CCAGAGAAACAACCATGTGAACTTTTTGTGTTTTACACCTTTTTGTTTTTAAAACCTTCT
TGAATTAACTTATAATCAGCAAACATGTAACTCCCACAAAATATATACATACATACATAC
AACTTTTTTATTATTCTATTGGGTGTACAATTGGGCAGTAAGAACTTTTTTGTTAATTAT
TGGGTGTACAATTGGGCAGTAAGAACTTTCTTGTTGATTATTGGCGC