Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g076390.3.1
CDS Infomation	Lysine-specific demethylase (AHRD V3.3 *** A0A199VZ18_ANACO)
Sequence	ATGGTGGAAGGGAGAGTCTGCATGTCGAGGGAGGCTAAATTGGAATTTTTGAAGCGAAAG AGGCTTCAACGAATGAAAACAGAATCTTTGAATGATCTTTCTTGTGTCAGCAATATGCTG AGTAGAAGCGGAGGAGATGCCCTACGATCTTCTGCTTCATGTGGTGTTAGAATCCAGGTT AATACTGATTCATATCCAGGATCTGGGGCTTCTTTTAATGGAAAGGATAATTTCTCAAAG CACAAGGTAGCAAAGTTTGACACTTCCAATCTGGACTGGATCGATAAAATTCCAGAATGT CCAGTATACTGTCCAACTAAAGAGGAGTTTGAGGATCCCTTAGTTTATCTCCAGAAGTTA GCTCCCGAAGCTTCTAAATATGGTATATGCAAGATTGTTGCCCCTATAACTGCTTCTGTT CCTGCTGGAGTTGTTTTGATGAAAGAGAAGGCTGGTTTTAAATTTACTACTAGGGTACAG CCACTTCGGCTAGCCGAATGGGACACGGATGACAAGGTCACCTTTTTCATGAGTGGAAGG AACTATTCATTCAGAGATTTCGAGAAAATGGCGAACAAGGTATTTTCTCGTCGATATTAT AGTGCTGGATGCCTTCCTCCTACATACTTGGAAAAAGAATTTTGGCATGAAATAGCTTGT GGAAAGACTGATAGTGTAGAATATGCCTGTGATGTTGATGGTAGTGCGTTCTCATCTTCT CCAAATGATCAGCTCGGAAAAAGCAAATGGAATTTGAAGGAACTTTCTCGGTTGCCTAAA TCAGTACTGCGGCTCCTCGAAAAATCAATCCCGGGAGTTACTGAACCTATGTTGTATATT GGAATGCTATTTAGTATGTTTGCTTGGCATGTGGAAGACCACTACTTATATAGTATCAAT TATCAGCACTGTGGGGCAGCAAAAACGTGGTACGGTATTCCAGGTCATGCAGCACTTGAC TTTGAGAAGGTCGTCCGGGAGCATGTGTACACCAATGATATCTTATCAGCTGATGGAGAG GATGGAGCTTTTGATGTGCTTTTGGGGAAGACAACACTGTTTCCTCCAAATATTTTGTCA GAGCATGGTGTACCTGTGTATAGAGCTGTTCAAAAGCCCGGCGAATTCGTAGTAACTTTT CCTAGAGCGTATCATGCAGGATTTAGTCATGGTTTTAATTGTGGTGAGGCAGTTAACTTT GCAACTGGCGATTGGTTTCCTATGGGTTCAATTTCTAGCCGTCGCTATGCACTTTTGAAC AGGGTGCCCTTACTTCCCCATGAGGAACTTCTCTGCAAAGAAGCAATGCTTCTGTGTACG AGTTTGAAACTGGAAGATCCTGACTATTCCTCTTCAGACTTGATCACTCATCGTAGCATC AAAGTTTCTTTTTTGAATTTGATGAGGTTTCAGCATCGTGCTCGTTGGTGCCTCGCAAGG TTAAAAGCATTTTCATGCATATCTTTATTCACACATGGTACCATTCTTTGCAGCATATGC AAGCGTGATTGTTATGTAGCTTACCTTAACTGCAACTGCTATGCACATGCAGTGTGCCTT CGCCATGAACCTAGGTCACTTGATTTTCCTTGCGGCAGCAATAGAACCCTTTGCCTAAGG GAAGATATTTTGGACATGGAAACTGCAGCTAGACAGTTTGAGCAGGATAAGGTAGTTCTG CATGAAGTTCAACAGCAACACAGAAAAACTGATGACTTTTCTAAACTTTTAAAAATGTTT CCACGAGCCGAGGATGATGGTTATGTTCCATATTGTGAAATCAATTTTGAATGGCCAGAG GACTCAGTTGAACAAACAATTTATGAGGAAGCACCAAATGGTTCTGGTCCTGTTGTGTCT GATCTCAACTCTTCAATGGAGCCAAAAGATTATCTTTCAACTGGTGTTAATGTACAGGGA AATGCTAACTGTAACTTAGGGGATAGTTCATCAATGAAGCTCCATGGTGATGTTTTTAGT TGTGGGAGTGAAAGATCGGAGATTTCATCAAGTGCTAGCAGTAAAGTCCATCAGAAAGTA GCTCAAGAGACGGATTGTAGAACTATTATAGATCAAGACAGTGATGAGTCTGATACAGAG GTTTTCAGAGTGAAGAGACGTCCTCGAGCAGAACATAGAAGTGTACATGATTCAATGTCT ATCAACGTTGAAAATCAGAGTTTTAAAAGATTAAAGAAACATCAATCAGGACGATTGGGG TCATTGTGTTTGCCAGAGCATTCCTCGACTTGTGATATAAATCATAGGTCCGTTGCTATT TCAAGCCAATCGAAGGAAGCATTGGACTTCCATCCCAGAGACAAGTCAGTGAGAGGTGGT ACAGTTCCAGTCTGTATTAAGTTGAAGAAAGGGGTTGGTTATGAACAAGATGAGCACAAG AGAGATGATAGGTTACCGTTTGAATTGGGGCAGAGTAAGAGGAGGGAACCAGGGAGAACA GAGAGTGGGTCGAAGCGTTTGAAAGTCAGAGGTCCTTCAGTTTTAGGGTTTGGAGGTCGG ATGGATGGATTGAATAGATAG

Peptide Sequence

PEP ID	Solyc08g076390.3.1
PEP Infomation	Lysine-specific demethylase (AHRD V3.3 *** A0A199VZ18_ANACO)
Sequence	MVEGRVCMSREAKLEFLKRKRLQRMKTESLNDLSCVSNMLSRSGGDALRSSASCGVRIQV NTDSYPGSGASFNGKDNFSKHKVAKFDTSNLDWIDKIPECPVYCPTKEEFEDPLVYLQKL APEASKYGICKIVAPITASVPAGVVLMKEKAGFKFTTRVQPLRLAEWDTDDKVTFFMSGR NYSFRDFEKMANKVFSRRYYSAGCLPPTYLEKEFWHEIACGKTDSVEYACDVDGSAFSSS PNDQLGKSKWNLKELSRLPKSVLRLLEKSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSIN YQHCGAAKTWYGIPGHAALDFEKVVREHVYTNDILSADGEDGAFDVLLGKTTLFPPNILS EHGVPVYRAVQKPGEFVVTFPRAYHAGFSHGFNCGEAVNFATGDWFPMGSISSRRYALLN RVPLLPHEELLCKEAMLLCTSLKLEDPDYSSSDLITHRSIKVSFLNLMRFQHRARWCLAR LKAFSCISLFTHGTILCSICKRDCYVAYLNCNCYAHAVCLRHEPRSLDFPCGSNRTLCLR EDILDMETAARQFEQDKVVLHEVQQQHRKTDDFSKLLKMFPRAEDDGYVPYCEINFEWPE DSVEQTIYEEAPNGSGPVVSDLNSSMEPKDYLSTGVNVQGNANCNLGDSSSMKLHGDVFS CGSERSEISSSASSKVHQKVAQETDCRTIIDQDSDESDTEVFRVKRRPRAEHRSVHDSMS INVENQSFKRLKKHQSGRLGSLCLPEHSSTCDINHRSVAISSQSKEALDFHPRDKSVRGG TVPVCIKLKKGVGYEQDEHKRDDRLPFELGQSKRREPGRTESGSKRLKVRGPSVLGFGGR MDGLNR*

Transcript Sequence

Transcript ID	Solyc08g076390.3.1
Transcript Infomation	Lysine-specific demethylase (AHRD V3.3 *** A0A199VZ18_ANACO)
Sequence	TTTATTTTCTCTTTTTTCCGTTTTTTCTAAAAGCCAATACTTCTGGATTTCCATTTACTG TTCCCCTTCTTCTTCTCTCTCTTCCCTCTCTCTACTTGCCGGGAAACCTCTTCCCCTCGC CGGCGAACAACTTTTCCGTTTACCGGTGAAAAGAGTCGACGAAAAATTCTAATGCACTCA CTCTTCGTATTTCGTTCGGTTTGATTATTGCTTTTACCTTTGGCGTAACTGAGTCACTTG GTTGGTGGAATCGCTCTGATCTCTGAGTTTGACTCGTTTTGTGGAGTTCTAGGGGAATGT GGCGAGCCTAAGGGTGTTTTTCTGGCTCCTTATGCCCTAGATCAGGATCTAGGGCTTGAC TGAAGGCTGTATTGTTGTTTTTGGCCTTTTTTTGTATTGTTTTTTCTGTGAAGACGAAGA AGAGTAGGGAAAAGCTTCGTAATGAGATGGTGGAAGGGAGAGTCTGCATGTCGAGGGAGG CTAAATTGGAATTTTTGAAGCGAAAGAGGCTTCAACGAATGAAAACAGAATCTTTGAATG ATCTTTCTTGTGTCAGCAATATGCTGAGTAGAAGCGGAGGAGATGCCCTACGATCTTCTG CTTCATGTGGTGTTAGAATCCAGGTTAATACTGATTCATATCCAGGATCTGGGGCTTCTT TTAATGGAAAGGATAATTTCTCAAAGCACAAGGTAGCAAAGTTTGACACTTCCAATCTGG ACTGGATCGATAAAATTCCAGAATGTCCAGTATACTGTCCAACTAAAGAGGAGTTTGAGG ATCCCTTAGTTTATCTCCAGAAGTTAGCTCCCGAAGCTTCTAAATATGGTATATGCAAGA TTGTTGCCCCTATAACTGCTTCTGTTCCTGCTGGAGTTGTTTTGATGAAAGAGAAGGCTG GTTTTAAATTTACTACTAGGGTACAGCCACTTCGGCTAGCCGAATGGGACACGGATGACA AGGTCACCTTTTTCATGAGTGGAAGGAACTATTCATTCAGAGATTTCGAGAAAATGGCGA ACAAGGTATTTTCTCGTCGATATTATAGTGCTGGATGCCTTCCTCCTACATACTTGGAAA AAGAATTTTGGCATGAAATAGCTTGTGGAAAGACTGATAGTGTAGAATATGCCTGTGATG TTGATGGTAGTGCGTTCTCATCTTCTCCAAATGATCAGCTCGGAAAAAGCAAATGGAATT TGAAGGAACTTTCTCGGTTGCCTAAATCAGTACTGCGGCTCCTCGAAAAATCAATCCCGG GAGTTACTGAACCTATGTTGTATATTGGAATGCTATTTAGTATGTTTGCTTGGCATGTGG AAGACCACTACTTATATAGTATCAATTATCAGCACTGTGGGGCAGCAAAAACGTGGTACG GTATTCCAGGTCATGCAGCACTTGACTTTGAGAAGGTCGTCCGGGAGCATGTGTACACCA ATGATATCTTATCAGCTGATGGAGAGGATGGAGCTTTTGATGTGCTTTTGGGGAAGACAA CACTGTTTCCTCCAAATATTTTGTCAGAGCATGGTGTACCTGTGTATAGAGCTGTTCAAA AGCCCGGCGAATTCGTAGTAACTTTTCCTAGAGCGTATCATGCAGGATTTAGTCATGGTT TTAATTGTGGTGAGGCAGTTAACTTTGCAACTGGCGATTGGTTTCCTATGGGTTCAATTT CTAGCCGTCGCTATGCACTTTTGAACAGGGTGCCCTTACTTCCCCATGAGGAACTTCTCT GCAAAGAAGCAATGCTTCTGTGTACGAGTTTGAAACTGGAAGATCCTGACTATTCCTCTT CAGACTTGATCACTCATCGTAGCATCAAAGTTTCTTTTTTGAATTTGATGAGGTTTCAGC ATCGTGCTCGTTGGTGCCTCGCAAGGTTAAAAGCATTTTCATGCATATCTTTATTCACAC ATGGTACCATTCTTTGCAGCATATGCAAGCGTGATTGTTATGTAGCTTACCTTAACTGCA ACTGCTATGCACATGCAGTGTGCCTTCGCCATGAACCTAGGTCACTTGATTTTCCTTGCG GCAGCAATAGAACCCTTTGCCTAAGGGAAGATATTTTGGACATGGAAACTGCAGCTAGAC AGTTTGAGCAGGATAAGGTAGTTCTGCATGAAGTTCAACAGCAACACAGAAAAACTGATG ACTTTTCTAAACTTTTAAAAATGTTTCCACGAGCCGAGGATGATGGTTATGTTCCATATT GTGAAATCAATTTTGAATGGCCAGAGGACTCAGTTGAACAAACAATTTATGAGGAAGCAC CAAATGGTTCTGGTCCTGTTGTGTCTGATCTCAACTCTTCAATGGAGCCAAAAGATTATC TTTCAACTGGTGTTAATGTACAGGGAAATGCTAACTGTAACTTAGGGGATAGTTCATCAA TGAAGCTCCATGGTGATGTTTTTAGTTGTGGGAGTGAAAGATCGGAGATTTCATCAAGTG CTAGCAGTAAAGTCCATCAGAAAGTAGCTCAAGAGACGGATTGTAGAACTATTATAGATC AAGACAGTGATGAGTCTGATACAGAGGTTTTCAGAGTGAAGAGACGTCCTCGAGCAGAAC ATAGAAGTGTACATGATTCAATGTCTATCAACGTTGAAAATCAGAGTTTTAAAAGATTAA AGAAACATCAATCAGGACGATTGGGGTCATTGTGTTTGCCAGAGCATTCCTCGACTTGTG ATATAAATCATAGGTCCGTTGCTATTTCAAGCCAATCGAAGGAAGCATTGGACTTCCATC CCAGAGACAAGTCAGTGAGAGGTGGTACAGTTCCAGTCTGTATTAAGTTGAAGAAAGGGG TTGGTTATGAACAAGATGAGCACAAGAGAGATGATAGGTTACCGTTTGAATTGGGGCAGA GTAAGAGGAGGGAACCAGGGAGAACAGAGAGTGGGTCGAAGCGTTTGAAAGTCAGAGGTC CTTCAGTTTTAGGGTTTGGAGGTCGGATGGATGGATTGAATAGATAGGTAACTGAAAAAG TAAAGGAGCATCGACTTTGCTAACACACAGATATTCTCTAACAACACGATAAAGAAAGGT AAGCATTAGATTAAAGAAGAGTTCTTTGTGCAGGCCTCTAAAGTTGGGGCAAGTAGCACA GTGGTGATTGTTATTGTTCTTTGTCCAGGGAGGAGAACCTCTCTCCTTGTTATTCCACTG CAGATAGATAGTAGGTGAATTCTCTCATGTACATTTTTATTTTTAACAAGTTGATCCAAT TCTTGTGAGGTGCAAATGGGTATTCCCAAATAGCCCTCTGATTTAATGTCAAGCCTGTTG CCTTCTCCCTAGTTTAGGGTTCATTATTCTTTTGTAGCTACATGTCCTTTTTTGGCTTGA AACTACATGAATAAATACATAGCATTTTTTTTCCCCCTTTCACT