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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g076080.3.1
CDS Infomation

Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4CMX5_SOLLC)
Sequence

ATGGATCATCGAGTTCTTTCATTTGTATCAAAATCAATAACACCTTTCTCTCTCCTATTA
TTACTGTACATTTTTCCGGCGGCTGAGACGGCGGCGAACATGACGTATAAGGCGTTTAAT
CTGCCGACGATTACTTTCAAAGAAGGATATTCCCCTCTTTTTAGTGATTTCAATATTGAA
CGATCTCCTGATGATCGAAGCTTTCGTCTCCTCCTTAATAAATTCTCAGGATCGGGTGTT
ATTTCAACAGAATATTACAATTATGGATTTTTCAGCGCTAGTATAAAGTTACCGGCCATA
TATACGGCCGGCATCGTCGTCGCTTTCTATACATCAAATGCAGATACATTTGAGAAGAAT
CATGATGAGTTAGATATTGAGTTTTTGGGGAATGTGAACGGTCAACCATGGAGGTTTCAG
ACTAACATGTATGGAAATGGCAGTGTTAGCCGTGGTAGAGAAGAGAGGTATAGAATGTGG
TTTGATCCAAGCAAGGACTTTCATCAGTACAGCATTCTTTGGACACCAAAAAACATCATA
TTTTACATTGATGAAACACCACTTAGAGAAATAAATCGCCATCCAGCAATGGGAGGTGAC
TTTCCAGCAAAACCAATGGCTTTATATGCCACAATTTGGGATGCATCTTCTTGGGCTACA
AATGGTGGCAAAGCTAAAGTGGACTATAAATATGAACCTTTTGCAACAGAGCTTAAAGAC
TTAGTTCTTGAAGGATGCATAGTAGATCCATCTGAGCAAATTCCATCAACAAATTGCACT
GACAGGAATGCTAAATTACTTGCTCAAGATTACTCTAACATCACGCCCGAAAGGCGAAAC
AACATGAAATTTTTTAGGGAAAGATACATGTACTATTCTTATTGTTATGATAACCTTAGG
TACCCTGTGCCACCACCAGAATGTGTGATTGTTCAGTCCGAAAGAGATTTGTTTAGGGAC
AGTGGAAGGCTTAGGCAGAAGATGAAGTTTGGTGGGAGCCACAGCCATACCCAAAGCCAC
CGGAAACACCGCCCTGGACGGAGCTCTAGGCGGCGGAATAAGGTGGCTGGCGGTGCATCA
AAATCTGGCCGACGAGGTTCTGCTGCTGCTGCAATGTGA

Peptide Sequence

PEP ID

Solyc08g076080.3.1
PEP Infomation

Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4CMX5_SOLLC)
Sequence

MDHRVLSFVSKSITPFSLLLLLYIFPAAETAANMTYKAFNLPTITFKEGYSPLFSDFNIE
RSPDDRSFRLLLNKFSGSGVISTEYYNYGFFSASIKLPAIYTAGIVVAFYTSNADTFEKN
HDELDIEFLGNVNGQPWRFQTNMYGNGSVSRGREERYRMWFDPSKDFHQYSILWTPKNII
FYIDETPLREINRHPAMGGDFPAKPMALYATIWDASSWATNGGKAKVDYKYEPFATELKD
LVLEGCIVDPSEQIPSTNCTDRNAKLLAQDYSNITPERRNNMKFFRERYMYYSYCYDNLR
YPVPPPECVIVQSERDLFRDSGRLRQKMKFGGSHSHTQSHRKHRPGRSSRRRNKVAGGAS
KSGRRGSAAAAM*

Transcript Sequence

Transcript ID

Solyc08g076080.3.1
Transcript Infomation

Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 *** K4CMX5_SOLLC)
Sequence

CAGCAAAAACAATTACTCATATTACGTGTGTATATATTGACTTTGATTTAGTTCATAAGT
TACTTGCGTCACAAGTTGATTTTCTCATAATATTATAAATATCGAATGCGACTAAACTTT
TATGCAAAATCACTTTCATCCTCTCATACGGATTGCGATCATTTAAAGAAAAGCAAATCT
AGCTATGTACTATTTAATCATGAATAGAGAAGAAATGAGATTGAATAAAATGTAGAAGGA
CATGACTCATGACTAAATTACTTAAATAATGTGCGATAGATATTCACATATTGAGATTTG
ATTAAATTTATTTACATATTGTAGGATTCATTTTTAATGCGAATATTTAATTTAAAGATG
AGTTAATCTCAATTATGTAGTATATATGAGATTACACTCTTAACTTTCATGACCATATTT
AAATTTGATATTTTGATTGATATGTATGGAGGAGTTATCTATTATCTTAAATTAATTTAA
CCTAATAATAACATTATCTTTGGAACCAAAACTCGATTTGATTTTACAATCCTTTACACA
TAAAAGAATTTTCTTTTTAGAAAACATTATCTTCTATTTCTATTTAAGTTATAAATAGTC
ATAATAGGAGTATATCATTTTCATCAAACTTGCAATATTACATTCCAATTCAACTATGTT
TTGGTTATTAAATAGAACTTTCTTTCATATTACTCCACCATCCCAAAAAAGTATGATCCT
ATCAAAAATTAAGTCTAATAAAAAAAAGTTAATAAGTACATGAATTAGTGTAGTTTATTA
AATTTATCAAATATTTATCGAACTTTTCTTTTAAAAACAAGAATATATATGGAAAAACAT
GTTGATTTTTACTTTATTCCCTTTTTATAAAAATATATCACGTGGCAATCTAGTAAATAA
ACCCAACTACGAGGACTATTCTATATTCCACCCCTCAAAACCGTAACCTGCCAAATCTCT
CTGTTTCCTCCTCTCTTTCTTCATGGCTGCATATTCCGTTACCATTTTTGCGAATCGAAG
AATCCAAAAGAAGAAGAAAATGAAAAGATTACAAAAATTTTTATAATTAAGAGAGAAGAA
GAGAAAAAATCTAACGTATATATATGTATATATAGTAAAAAATTTCTATACAGAATTACA
AAAAAAATAATAATCATGGATCATCGAGTTCTTTCATTTGTATCAAAATCAATAACACCT
TTCTCTCTCCTATTATTACTGTACATTTTTCCGGCGGCTGAGACGGCGGCGAACATGACG
TATAAGGCGTTTAATCTGCCGACGATTACTTTCAAAGAAGGATATTCCCCTCTTTTTAGT
GATTTCAATATTGAACGATCTCCTGATGATCGAAGCTTTCGTCTCCTCCTTAATAAATTC
TCAGGATCGGGTGTTATTTCAACAGAATATTACAATTATGGATTTTTCAGCGCTAGTATA
AAGTTACCGGCCATATATACGGCCGGCATCGTCGTCGCTTTCTATACATCAAATGCAGAT
ACATTTGAGAAGAATCATGATGAGTTAGATATTGAGTTTTTGGGGAATGTGAACGGTCAA
CCATGGAGGTTTCAGACTAACATGTATGGAAATGGCAGTGTTAGCCGTGGTAGAGAAGAG
AGGTATAGAATGTGGTTTGATCCAAGCAAGGACTTTCATCAGTACAGCATTCTTTGGACA
CCAAAAAACATCATATTTTACATTGATGAAACACCACTTAGAGAAATAAATCGCCATCCA
GCAATGGGAGGTGACTTTCCAGCAAAACCAATGGCTTTATATGCCACAATTTGGGATGCA
TCTTCTTGGGCTACAAATGGTGGCAAAGCTAAAGTGGACTATAAATATGAACCTTTTGCA
ACAGAGCTTAAAGACTTAGTTCTTGAAGGATGCATAGTAGATCCATCTGAGCAAATTCCA
TCAACAAATTGCACTGACAGGAATGCTAAATTACTTGCTCAAGATTACTCTAACATCACG
CCCGAAAGGCGAAACAACATGAAATTTTTTAGGGAAAGATACATGTACTATTCTTATTGT
TATGATAACCTTAGGTACCCTGTGCCACCACCAGAATGTGTGATTGTTCAGTCCGAAAGA
GATTTGTTTAGGGACAGTGGAAGGCTTAGGCAGAAGATGAAGTTTGGTGGGAGCCACAGC
CATACCCAAAGCCACCGGAAACACCGCCCTGGACGGAGCTCTAGGCGGCGGAATAAGGTG
GCTGGCGGTGCATCAAAATCTGGCCGACGAGGTTCTGCTGCTGCTGCAATGTGATAAGTT
GTATAACTAAGGTATACAAGGTGAATATTATGGTTTGTAAAAAGTATATTACACTCCTAT
AGTTGGTATACATACTCATTAGTGGTATAAATATTAATGTGGTGGCTGGGTGAAGAGTAA
AAACCACATCCATTAATTTTTATGAGCAATGGTTTTCTTGGTTTCTTCACTATGTATATT
GGCACTTCATATTCATCCAAGCAATGTTATGATGAATGGTTGCATGGTTTTCGCAGCTAT
TTGTCACTTTCACCCCGAGCTGTAGAACTATTGAGTCTGATCAATACAGTCCAGTCATTT
TTCCTAT