Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc08g075990.3.1
CDS Infomation	LOW PSII ACCUMULATION protein (DUF1995) (AHRD V3.3 *** AT5G48790.1)
Sequence	ATGTGGTTATCCACTTTTCCAACTGCACTAACAGCTGCTGTTTCAGTTCCTTCCTCTCAT ACTCCACAGGATTTCAGCTGGAGAAAGTTTAAATTGAAGAGAAATGTGAAAATTTCAAGA AATTTTGAATTTGCCATCAGTTGTTCTGGTGATAAAGCTGCTTCAATTGGGTTTGATGTG TCATTCCCTAAGGACTACACTGAATTACTTCAACAAGCTAAAGAAGCAACTGAATTGGCA TTGAAGGATAACAGACAACTGATGGAAATTGAATTTCCAACTGCTGGGTTGGGTTCTGTA CCAGGTGACGGTGAGGGTGGAATAGAAATGACTGGAAGTATACAACTAATACGTGAGTTC TGTGATCTCTTGGTTATACCAGAGAAAGCCACAAAGACCAGAATTTTTTTCCCGGAGGCT AACGAAGTGAAATTTGCAAGACAATCAATTTTTGGAGGAGCATCTTTTAAGTTGGACTAT TTGACAAAGCCTTCTTTTTTCGAAGATTTCGGTTTCACCGAAAAGGTCAAGATGGCTGAT CGTGTCAAGCCAGAAGATGAACTCTTTGTGGTCGCCTATCCATACTTTAATGTCAATGAG ATGCTTGTCGTGGAAGAGCTATACAAAGCAGCAGTGTCGAACACTTCTAGAAAACTGATT ATATTCAACGGAGAGCTTGACCGAATAAGATCTGGTTATTATCCGCCATTCTTTTATCCG AAGCTGGCTGCACTATCCAAGACTCTTTTTCCTGAAATGGAGACGGTATATTATATTCAC AATTTTAAAGGACGATATGGAGGAGTCCTGTTTAGGTGTTACCCTGGTCCTTGGAAAGTT TTCCGAAGAGTAGGAAGTAGCTACATCTGCTTGCATCAACAGGAGTCAATGCCATCCTTG AAAGAAGTTGCTTTGGACATCCTTCCATCAGCTTGA

Peptide Sequence

PEP ID	Solyc08g075990.3.1
PEP Infomation	LOW PSII ACCUMULATION protein (DUF1995) (AHRD V3.3 *** AT5G48790.1)
Sequence	MWLSTFPTALTAAVSVPSSHTPQDFSWRKFKLKRNVKISRNFEFAISCSGDKAASIGFDV SFPKDYTELLQQAKEATELALKDNRQLMEIEFPTAGLGSVPGDGEGGIEMTGSIQLIREF CDLLVIPEKATKTRIFFPEANEVKFARQSIFGGASFKLDYLTKPSFFEDFGFTEKVKMAD RVKPEDELFVVAYPYFNVNEMLVVEELYKAAVSNTSRKLIIFNGELDRIRSGYYPPFFYP KLAALSKTLFPEMETVYYIHNFKGRYGGVLFRCYPGPWKVFRRVGSSYICLHQQESMPSL KEVALDILPSA*

Transcript Sequence

Transcript ID	Solyc08g075990.3.1
Transcript Infomation	LOW PSII ACCUMULATION protein (DUF1995) (AHRD V3.3 *** AT5G48790.1)
Sequence	ATTGTAAGAAAATACAATGATAATGGATATAAACTTTTTTTTTTGTTCTAGTTTATAAAG AGGGGAATACACTTTATTGTTAACTCTTTTGAACCTTTCTTTTTTTCTCTCTGTCCTTGT GGTTAGAATTCAAAATGTGGTTATCCACTTTTCCAACTGCACTAACAGCTGCTGTTTCAG TTCCTTCCTCTCATACTCCACAGGATTTCAGCTGGAGAAAGTTTAAATTGAAGAGAAATG TGAAAATTTCAAGAAATTTTGAATTTGCCATCAGTTGTTCTGGTGATAAAGCTGCTTCAA TTGGGTTTGATGTGTCATTCCCTAAGGACTACACTGAATTACTTCAACAAGCTAAAGAAG CAACTGAATTGGCATTGAAGGATAACAGACAACTGATGGAAATTGAATTTCCAACTGCTG GGTTGGGTTCTGTACCAGGTGACGGTGAGGGTGGAATAGAAATGACTGGAAGTATACAAC TAATACGTGAGTTCTGTGATCTCTTGGTTATACCAGAGAAAGCCACAAAGACCAGAATTT TTTTCCCGGAGGCTAACGAAGTGAAATTTGCAAGACAATCAATTTTTGGAGGAGCATCTT TTAAGTTGGACTATTTGACAAAGCCTTCTTTTTTCGAAGATTTCGGTTTCACCGAAAAGG TCAAGATGGCTGATCGTGTCAAGCCAGAAGATGAACTCTTTGTGGTCGCCTATCCATACT TTAATGTCAATGAGATGCTTGTCGTGGAAGAGCTATACAAAGCAGCAGTGTCGAACACTT CTAGAAAACTGATTATATTCAACGGAGAGCTTGACCGAATAAGATCTGGTTATTATCCGC CATTCTTTTATCCGAAGCTGGCTGCACTATCCAAGACTCTTTTTCCTGAAATGGAGACGG TATATTATATTCACAATTTTAAAGGACGATATGGAGGAGTCCTGTTTAGGTGTTACCCTG GTCCTTGGAAAGTTTTCCGAAGAGTAGGAAGTAGCTACATCTGCTTGCATCAACAGGAGT CAATGCCATCCTTGAAAGAAGTTGCTTTGGACATCCTTCCATCAGCTTGATTGTTTTGTT TATAAGTTGCACATTTCCCCTCTTTCTCCTGTTATTTGAAGGAAGAAAAACTGTTCATAT CTGTGTTCTTTTATGACCTATGTTATTGCAGAATTCTTAATTCATGCATTATCCAACAAA TCCCTTTACGGTGTGAATATGTTGATTTCGTTACACTTGTAATACACATGTATATTAACC TTCAAAAGTTGTTGAACACCACACTACCAGAAATTCTCCAATTTCTGATGTCCCTTTCTG TTGGAAAACTGACGGATATAAGGAATTTCAATGCTGTTCGAACGGTTCTTGATCCTTCTG GAAGATAGCTAGTCAGAGAAGGCTCATGTCCTAGTGTTTATGAAGGGACTTGAGCCTTTT TTGGTACAAGTAGTTGAATGGATGACTATTTGAATGAGACCAAAGTAGCTAGCTGTAGGC ATTGAGTTATTTGGTAGATGAGTGAAAATGCACAAAGTTGATCACCAAATGGATGACTAT TTGAATGTGTATATTGGTTAAGCTTTGATCTGTTTTTCTTTTCTTTCTGAGGTTCCAATA CAGTTTATGCTGGATGTAGTTTTGTGATTGTATTTTGGAAGCAAATCAATTATTAATATC TATTCGTATATTAAAACTTTTATTATGTGAAATCTAATAGACTATGTTACTTTTAAGATC ATAGAGTCTATTTGCTTTCTAGTAATATTCAGTGGCATCATTTTTTTTTCTGCACGCTAG GAATAG