Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g075810.3.1
CDS Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** B9H5H2_POPTR)
Sequence

ATGGAGGGCACAGTGAAATGCTCAGCGAACTACGTGCCGTTGAGTCCAATTAGCTTCTTA
GAAAGATCAGCAAAGGTTTATAGTGATAGACTCTCTATTGTTCACGGAAATGTCAAATAT
ACTTGGAGAGAAACTCGTCAAAGGTGTATCCAACTTGCTTTTGCTCTAACCCATTTAGGG
ATTTCTCGTGGCGATGTCGTTGCTGCCTTGGCTCCAAATATTCCTGCAATGTACGAGCTT
CACTTTGGAGTACCAATGGCTGGGGCAGTTCTATGTGCACTTAATACACGTCATGATTCT
GCAATGGTCTCTGTGTTACTTAGACATTCCGAGGCCAAAGTCATAGTTGTAGATCACCAG
TTGCTCGATGTTGCTAAGGGTGCATTAGAAATTCTATCTAAGGCTAGCAGAAAGTTGCCG
CATCTTATCTTGATATCTGATAGAGAGAGTCAGTTATCTAGCCAGAATAATAGTAATAGG
AGCTTGGGTTCAAAAGATCTGGAGTATGAGTCCTTTTTAGCTAATGGAGAACCTGATTTT
GAGATTTTATGGCCAAATGATGAACGGGATGCTATTGCTCTTAATTATACCTCAGGGACA
ACATCGAGACCAAAAGGGGTCGTTTATAGTCACAGAGGAGCATATCTTAATTCTCTGGCT
GCAGCTCTTCTTGCTGAAATGACTTCAATGCCTGTCTATCTATGGACTCTTCCCATGTTT
CATTGCAATGGATGGTGTCTTACTTGGACTGTGGCAGCACAGGGTGGTACAAATATTTGC
CTGAGAAATGTAACCGAAAAAGGGATTTTTGACAGCATAATTCAACACCAAGTGACTAAC
ATGGCTGGTGCACCTACGGTTTTGAACATGATAATAAATGCGCCACGAAGTGTCCAAAGA
CCACTCTCAAGGACAGTTAACGTTATGACAGGTGGTGCCCCACCTCCTCCTCAAGTTCTA
CTTAAAATGAAAGAGCTCGGTTTTAATGTTACTCATGGATATGGTCTTACGGAAACCTAT
GGTCCAGCAACTGTTTGCATGTGGAAACCAGAGTGGAACTCTCTATCACCTGATGAGCAG
GCTAATATTCAGGCTCGTCAAGGAGTGAACCATCTTGGCTTGGAGGATGTAGACGTAAAG
GATTCTGAATCAATGAAGAGTGTACCCTCAGATGCAAAAACAATGGGTGAGGTGATGATT
AGAGGAAACACAGTAATGAATGGTTACTTAAAAGATCGCAAAGCTACAGAAGATGCTTTT
AGAGGGGGTTGGTTTCGAAGCGGGGACTTAGCAGTGAAGCATCCTGATGGTTACATAGAA
TTAAAGGATCGTTCGAAGGATATCATTATTTCCGGTGGAGAAAACATTAGTACAATCGAA
GTGGAGTCGGTAATCTTTAGCCATCCATCTGTTCTTGAAGCTGCTGTTGTGGGAAGACCA
GATGATCACTGGGGTGAGACACCTTGCGCATTCGTCAAACTGAAGAACGGATGCAATGCA
AGTGCTGATGAGATCATCAAGCATTGTCGTGATCGTTTGCCGCATTACATGGCTCCTAGG
ACAGTAATTTTTGATGATTTGCCAACAACTTCAACAGGAAAGATTCAAAAGTTTGTCCTG
AGAGAGAGAGTCAAAGCAATGGGAAGTGTTTCGAAAGCTAGCAAACTATAA

Peptide Sequence

PEP ID

Solyc08g075810.3.1
PEP Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** B9H5H2_POPTR)
Sequence

MEGTVKCSANYVPLSPISFLERSAKVYSDRLSIVHGNVKYTWRETRQRCIQLAFALTHLG
ISRGDVVAALAPNIPAMYELHFGVPMAGAVLCALNTRHDSAMVSVLLRHSEAKVIVVDHQ
LLDVAKGALEILSKASRKLPHLILISDRESQLSSQNNSNRSLGSKDLEYESFLANGEPDF
EILWPNDERDAIALNYTSGTTSRPKGVVYSHRGAYLNSLAAALLAEMTSMPVYLWTLPMF
HCNGWCLTWTVAAQGGTNICLRNVTEKGIFDSIIQHQVTNMAGAPTVLNMIINAPRSVQR
PLSRTVNVMTGGAPPPPQVLLKMKELGFNVTHGYGLTETYGPATVCMWKPEWNSLSPDEQ
ANIQARQGVNHLGLEDVDVKDSESMKSVPSDAKTMGEVMIRGNTVMNGYLKDRKATEDAF
RGGWFRSGDLAVKHPDGYIELKDRSKDIIISGGENISTIEVESVIFSHPSVLEAAVVGRP
DDHWGETPCAFVKLKNGCNASADEIIKHCRDRLPHYMAPRTVIFDDLPTTSTGKIQKFVL
RERVKAMGSVSKASKL*

Transcript Sequence

Transcript ID

Solyc08g075810.3.1
Transcript Infomation

AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** B9H5H2_POPTR)
Sequence

CTTTACTACCATAATTAATGAGTTAATCATAATAAATTGTCTCCATTAACAGAACTTAGC
TACTAATTTTCCGAACCATTCAACTTTCACAATAAAAAAGAAGTTCTCCTAATTCCTCCA
AACTCCGGCGATAGCGAAGACTCCTCCGCCCTTCAGCCGATCTTCCAGCCTACAAATGGA
GGGCACAGTGAAATGCTCAGCGAACTACGTGCCGTTGAGTCCAATTAGCTTCTTAGAAAG
ATCAGCAAAGGTTTATAGTGATAGACTCTCTATTGTTCACGGAAATGTCAAATATACTTG
GAGAGAAACTCGTCAAAGGTGTATCCAACTTGCTTTTGCTCTAACCCATTTAGGGATTTC
TCGTGGCGATGTCGTTGCTGCCTTGGCTCCAAATATTCCTGCAATGTACGAGCTTCACTT
TGGAGTACCAATGGCTGGGGCAGTTCTATGTGCACTTAATACACGTCATGATTCTGCAAT
GGTCTCTGTGTTACTTAGACATTCCGAGGCCAAAGTCATAGTTGTAGATCACCAGTTGCT
CGATGTTGCTAAGGGTGCATTAGAAATTCTATCTAAGGCTAGCAGAAAGTTGCCGCATCT
TATCTTGATATCTGATAGAGAGAGTCAGTTATCTAGCCAGAATAATAGTAATAGGAGCTT
GGGTTCAAAAGATCTGGAGTATGAGTCCTTTTTAGCTAATGGAGAACCTGATTTTGAGAT
TTTATGGCCAAATGATGAACGGGATGCTATTGCTCTTAATTATACCTCAGGGACAACATC
GAGACCAAAAGGGGTCGTTTATAGTCACAGAGGAGCATATCTTAATTCTCTGGCTGCAGC
TCTTCTTGCTGAAATGACTTCAATGCCTGTCTATCTATGGACTCTTCCCATGTTTCATTG
CAATGGATGGTGTCTTACTTGGACTGTGGCAGCACAGGGTGGTACAAATATTTGCCTGAG
AAATGTAACCGAAAAAGGGATTTTTGACAGCATAATTCAACACCAAGTGACTAACATGGC
TGGTGCACCTACGGTTTTGAACATGATAATAAATGCGCCACGAAGTGTCCAAAGACCACT
CTCAAGGACAGTTAACGTTATGACAGGTGGTGCCCCACCTCCTCCTCAAGTTCTACTTAA
AATGAAAGAGCTCGGTTTTAATGTTACTCATGGATATGGTCTTACGGAAACCTATGGTCC
AGCAACTGTTTGCATGTGGAAACCAGAGTGGAACTCTCTATCACCTGATGAGCAGGCTAA
TATTCAGGCTCGTCAAGGAGTGAACCATCTTGGCTTGGAGGATGTAGACGTAAAGGATTC
TGAATCAATGAAGAGTGTACCCTCAGATGCAAAAACAATGGGTGAGGTGATGATTAGAGG
AAACACAGTAATGAATGGTTACTTAAAAGATCGCAAAGCTACAGAAGATGCTTTTAGAGG
GGGTTGGTTTCGAAGCGGGGACTTAGCAGTGAAGCATCCTGATGGTTACATAGAATTAAA
GGATCGTTCGAAGGATATCATTATTTCCGGTGGAGAAAACATTAGTACAATCGAAGTGGA
GTCGGTAATCTTTAGCCATCCATCTGTTCTTGAAGCTGCTGTTGTGGGAAGACCAGATGA
TCACTGGGGTGAGACACCTTGCGCATTCGTCAAACTGAAGAACGGATGCAATGCAAGTGC
TGATGAGATCATCAAGCATTGTCGTGATCGTTTGCCGCATTACATGGCTCCTAGGACAGT
AATTTTTGATGATTTGCCAACAACTTCAACAGGAAAGATTCAAAAGTTTGTCCTGAGAGA
GAGAGTCAAAGCAATGGGAAGTGTTTCGAAAGCTAGCAAACTATAA