Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g075760.3.1
CDS Infomation

CYCLOPS/IPD3-like protein
Sequence

ATGGAAATGGAGGGAAGAGGTTATTCAGATTTCTATAGAAACACAAGTGAAGAATTGTTC
ATAAGAACTATGATGGACAACTCAGTAGGAGGAGTGCCAGTTCCTACAATGGAGATGTTA
GGTTTTAGAAACATCCCTCATTCTCTTCGAACCGACAGTGAGGAACTTTTCAAAAGCTGG
CTCACAAGTGCAGAGAATAATGGCAGTGATTCTACACCAATGGCTCGTGGTCGACAAGGA
TCACGAAGGATCTCCAGTGAACTTGCTGGTCTATCCAGTCAGCAAAATGAGGGGATTCAG
AAAAGAAAAATGGCCGATACTCAACAGCCACAGAATACATGTACTGCCATTGAATCATCT
AGCAACCTTAATAAACATTCAACCAGGAACGCGACAGATAGGGAAATGCAAGCTAGTAAT
CTGTTTTTAGCCAAGACCTGGTTCCATAGCTCTCAGCCCATGACGAGAAGTCGTTCATCT
GAGTTAAGGAGGAGGTATGCAGCCATGCAAAACTCACAGTCTTCACTAGCTCGTGAATCC
TTGCAAAATATACCTGGAAATGCTGTTAATAGCTTCAAAGAAGAAGTTTCTCATCCCACT
GGGTACACTGACATGTCAATGTGTGAAATGACCAACCAACCTAATACTTTTATGTCTCCA
TCAAATTCTTCTTCATCAACTTTTGAAGCACAGCAAGTGGATGGTGTGGATAATATTTCT
TCTGTTGTAAGCATGCTAAAGGGGACCTTAGAGAGGAAGAAATTGACAAACTATCATACT
GCGAGGGAAGCCATTGAGGAGAATATGTTGGGGTGTTATGGTAATCAAGAAATCTTTTGT
AACTCCGACATGAATCAACATCCAGGGAATCATATTTCTCTGAATCAAGGGACATATCAG
GACACACCTGTTGTTCAAGTCAGAGATACGGGGATCCCACAAACAGTTCAAGGGTCATTA
GATGCCGTCTTAGAAAGTATTATGGCTCCCTCAAACCCAATCCAGATAGACATGGTAACA
CAGGAACCTTCTCAAAGTGGATCTTCTGTTGCAGCACCAATACTTTCAATTGATTTTGAT
GCATATGATGGCCTGAGCAATGCAAGTCAAGCTTTAAATATGTACGAGGGCTGTAGAAAT
CAAGTCGGATATGGAAGGAGCTCAGAAAATGGTTCAACTGCTAGAGATATTAGAGAACGA
ATATATGACAACGTGAAGGACAACCAAAAGAAAGAAGGTTTAGTTCGAAATGGATCTTTA
ACATCTGTACAATCAGCGGAAAATGGAGATCCTAAGAAGAAGAGAAGGGTGGAGCGGTCT
CGGAAAATGGCAGAAGCCAAAGAGAGAAATTTAACACCAGCAATTCCTTCAGATATGCAA
TCCCTTGTGAAGCGCTGTGACAATCTGGAGAAGGAAGTTCGTTCACTTAAACTTAACCTG
GCGTTTATGAACAGAAAGGATTCTGAACAGACTACACAAATTGAAGAGCTGCAGAAGCAG
AATGAGGATTTGGTCAAGGAAAAAGAGCGCCTTCTTGGAGAAATCGAGAGGATCATTTCA
GAATCTGGAAAGTTTTAG

Peptide Sequence

PEP ID

Solyc08g075760.3.1
PEP Infomation

CYCLOPS/IPD3-like protein
Sequence

MEMEGRGYSDFYRNTSEELFIRTMMDNSVGGVPVPTMEMLGFRNIPHSLRTDSEELFKSW
LTSAENNGSDSTPMARGRQGSRRISSELAGLSSQQNEGIQKRKMADTQQPQNTCTAIESS
SNLNKHSTRNATDREMQASNLFLAKTWFHSSQPMTRSRSSELRRRYAAMQNSQSSLARES
LQNIPGNAVNSFKEEVSHPTGYTDMSMCEMTNQPNTFMSPSNSSSSTFEAQQVDGVDNIS
SVVSMLKGTLERKKLTNYHTAREAIEENMLGCYGNQEIFCNSDMNQHPGNHISLNQGTYQ
DTPVVQVRDTGIPQTVQGSLDAVLESIMAPSNPIQIDMVTQEPSQSGSSVAAPILSIDFD
AYDGLSNASQALNMYEGCRNQVGYGRSSENGSTARDIRERIYDNVKDNQKKEGLVRNGSL
TSVQSAENGDPKKKRRVERSRKMAEAKERNLTPAIPSDMQSLVKRCDNLEKEVRSLKLNL
AFMNRKDSEQTTQIEELQKQNEDLVKEKERLLGEIERIISESGKF*

Transcript Sequence

Transcript ID

Solyc08g075760.3.1
Transcript Infomation

CYCLOPS/IPD3-like protein
Sequence

CAGTATGTTATTTAATTTACTCTCGCTGAATGACAGATAAAATCAGCTTAGGAAAAATAT
TTAGTTTTCACATGGGATAGAGACAAGTATAAGGTGATTGGCATCTAATCAATTTGGATT
TATGTTAATTCTATTAATTGTTGCAATAATTTTTAATTAAGCCCACTACATGTTTGTCAA
TTTTTCTGACTCAAAAAGATGAGTTTGAATGTGACGTTTGATGCTTCAATTATACACTAA
GTTCTCTTTCTTTTTTAACAACAAAGTTGTTAGTATTAATCTTCAATGTTTTAGTAGTAA
AGTCTTTCATATTTTTTTTTATGCAATATCTCTACTTGAGTAATTAAAATAAAAAACTTG
TCCTTGTGACTGTGATCATTTTTGTATCATTTGAGTACTAACTATAGTTTTTGATCAAAA
GTTTATCTTTTTAGTTTGAATCTCTCTAGATGGGGTTTTTATGTCGAGGCAGAGGCGGAG
TTAGTATTTTGAGTTTATGAGTTTTGCATTATATGAAAGATATAGGGTGAAACTAAGAAC
CCATAGACAGGCTTGTAGCTACCTATATGTGTTGAGGGATTGATGAATGGTGGAAGTGTT
GATAAATCTTGGTAGAAAGTAGAGTTTAGTGTACTTCCGTGTTGAGAAGTTGAGGGAAGA
GAATGGAAATGGAGGGAAGAGGTTATTCAGATTTCTATAGAAACACAAGTGAAGAATTGT
TCATAAGAACTATGATGGACAACTCAGTAGGAGGAGTGCCAGTTCCTACAATGGAGATGT
TAGGTTTTAGAAACATCCCTCATTCTCTTCGAACCGACAGTGAGGAACTTTTCAAAAGCT
GGCTCACAAGTGCAGAGAATAATGGCAGTGATTCTACACCAATGGCTCGTGGTCGACAAG
GATCACGAAGGATCTCCAGTGAACTTGCTGGTCTATCCAGTCAGCAAAATGAGGGGATTC
AGAAAAGAAAAATGGCCGATACTCAACAGCCACAGAATACATGTACTGCCATTGAATCAT
CTAGCAACCTTAATAAACATTCAACCAGGAACGCGACAGATAGGGAAATGCAAGCTAGTA
ATCTGTTTTTAGCCAAGACCTGGTTCCATAGCTCTCAGCCCATGACGAGAAGTCGTTCAT
CTGAGTTAAGGAGGAGGTATGCAGCCATGCAAAACTCACAGTCTTCACTAGCTCGTGAAT
CCTTGCAAAATATACCTGGAAATGCTGTTAATAGCTTCAAAGAAGAAGTTTCTCATCCCA
CTGGGTACACTGACATGTCAATGTGTGAAATGACCAACCAACCTAATACTTTTATGTCTC
CATCAAATTCTTCTTCATCAACTTTTGAAGCACAGCAAGTGGATGGTGTGGATAATATTT
CTTCTGTTGTAAGCATGCTAAAGGGGACCTTAGAGAGGAAGAAATTGACAAACTATCATA
CTGCGAGGGAAGCCATTGAGGAGAATATGTTGGGGTGTTATGGTAATCAAGAAATCTTTT
GTAACTCCGACATGAATCAACATCCAGGGAATCATATTTCTCTGAATCAAGGGACATATC
AGGACACACCTGTTGTTCAAGTCAGAGATACGGGGATCCCACAAACAGTTCAAGGGTCAT
TAGATGCCGTCTTAGAAAGTATTATGGCTCCCTCAAACCCAATCCAGATAGACATGGTAA
CACAGGAACCTTCTCAAAGTGGATCTTCTGTTGCAGCACCAATACTTTCAATTGATTTTG
ATGCATATGATGGCCTGAGCAATGCAAGTCAAGCTTTAAATATGTACGAGGGCTGTAGAA
ATCAAGTCGGATATGGAAGGAGCTCAGAAAATGGTTCAACTGCTAGAGATATTAGAGAAC
GAATATATGACAACGTGAAGGACAACCAAAAGAAAGAAGGTTTAGTTCGAAATGGATCTT
TAACATCTGTACAATCAGCGGAAAATGGAGATCCTAAGAAGAAGAGAAGGGTGGAGCGGT
CTCGGAAAATGGCAGAAGCCAAAGAGAGAAATTTAACACCAGCAATTCCTTCAGATATGC
AATCCCTTGTGAAGCGCTGTGACAATCTGGAGAAGGAAGTTCGTTCACTTAAACTTAACC
TGGCGTTTATGAACAGAAAGGATTCTGAACAGACTACACAAATTGAAGAGCTGCAGAAGC
AGAATGAGGATTTGGTCAAGGAAAAAGAGCGCCTTCTTGGAGAAATCGAGAGGATCATTT
CAGAATCTGGAAAGTTTTAGATACTGTTACTCTTTAGCAGCTTCAGACGTGTTTCTTTAA
GAGGTCCTATGGGGTTGCTACAAGCACAGGAAAGTAGGCTGAATTCATTTCAAAGTTTCA
TGTTTTAGTTTGTAATCCAAATGTCAAGTGATAAGTACATTTAATTTCCTTGTTTTCTAA
GTTCTGTAGACGATTTGCTGTCTTATTATACATAAACTTCATCCTCAATAAGATAGCAAT
GTTCTTCAGTAAGTGTGGTAATGCATCAGCAGACTAAGAATCAGTGGAAAAACATATCAA
ATGGCAGCAACCAAATTTTGGCTAGTGTAATCAATTAGATAACAAAATAATACTCTAGTT
ATTGTTCCATCTTGTTTGAGGATGTCCCTTGAATTAGATAACAAAATAATACTCTAGCTT
AGAAAAGTGTTGTCGCTTCTCAAGAACACAAAGTAGAAAGTAAAAAGCACCAGAGAAAGA
ATAATACTAGACTTCATTCACCTGGGCACAGAATAATGCTCTGGGATAAACTTTTACTAG
TATTTATTCCTGCAGTTTTTTCTGTACACAAGGAACTAGATTACAACATATGGTAGAAAC
GCTATGTGAAAACTGTGTCTACTGGTACAAAGATATTA