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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g075460.3.1
CDS Infomation

WAT1-related protein (AHRD V3.3 *** K4CMR3_SOLLC)
Sequence

ATGGAAGCAGTTGAAGATGGAAATGGGGGTGAGATATGGAAAGCCCATGGTGCAATGGTT
TTGGTACAGCTTTTCAATGGTGGTTACCATGTGATTACTAAAGTGGCTCTTAATGTGGGC
ATGAATGAAATTGTCTTCTGTTTGTATAGAGATCTTATTGCTATAGCTATTCTTGCCCCA
ATTGCCTATTTCCGTGAAAAGAGGTCAAGGCTCCCCCTGAGTAAACGACTACTACTGTCA
TTCTTCATTTTAGGATTAACTGGTATTTTCGGTAACCAACTGTTGTTCCTTCTTGGACTT
GGCTACACAAATCCGGCTTACGCTGCTGCGTTGCAACCTGCAATACCAGTCTTTACGTTC
ATACTTTCTGTACTTATGGGTACAGAAACTGCGAAGCTTCTTACTATGGAAGGTCAGGCA
AAAGTTGGAGGTACCGTTGTTTGTGTTTCTGGGGCGATTTTGATGGCTGTATTCCGTGGT
ACAGCGGTGTTTGGAGACGGCACATCAGACTTCACAGCACAGATTGAGATAAGTGCTAAG
GGTCAACCAGAGCCTGCTGGATGGCTAATGTCTAGTCTTCTGGAGTTGGGATTTGATAAT
TGGCACCTAGGCGTCTTATGCTTGATAGGAAACTGTATGTGCATGGCAGCATACATAGCT
TTTCAGGCTCCAGTTTTGAGAGAATACCCGGCAAGCTTAACATTGACAGCATATTCTTAC
CTTTTTGGCGTTATACCAATGATAGGGACGTCATTCCTTGTGACCAATGGATCAACAGAT
TGGTATTTGACACAATCTGAAGTTGGTGCTGTGTGCTATGCTGGAATTATTACATCAGCG
CTGAACTATGGACTTACTACTTGGTGCAATAAGGTTATTGGCCCTGCTTTAGTTTCTTTA
TACAATCCGCTTCAACCTGCTGCAACAGCAATTTTGTCTAGTATTTTTCTTGGGAGCGCT
ATTTATCTGGGAAGCATTTTGGGAGGACTTCTCATTATAGCAGGGCTTTATTTCGTAACT
TGGGCATCTTACAGAGAGAAACAGGCAGCCATGGGAACTATAACTCATGATCCGCGGATA
ACGGATCCCTTAATCCCATATCAGATAGGACATAATTCCTCTGTTCCTTCTTCCTCAATG
CCAAAGATCAGTGATTAG

Peptide Sequence

PEP ID

Solyc08g075460.3.1
PEP Infomation

WAT1-related protein (AHRD V3.3 *** K4CMR3_SOLLC)
Sequence

MEAVEDGNGGEIWKAHGAMVLVQLFNGGYHVITKVALNVGMNEIVFCLYRDLIAIAILAP
IAYFREKRSRLPLSKRLLLSFFILGLTGIFGNQLLFLLGLGYTNPAYAAALQPAIPVFTF
ILSVLMGTETAKLLTMEGQAKVGGTVVCVSGAILMAVFRGTAVFGDGTSDFTAQIEISAK
GQPEPAGWLMSSLLELGFDNWHLGVLCLIGNCMCMAAYIAFQAPVLREYPASLTLTAYSY
LFGVIPMIGTSFLVTNGSTDWYLTQSEVGAVCYAGIITSALNYGLTTWCNKVIGPALVSL
YNPLQPAATAILSSIFLGSAIYLGSILGGLLIIAGLYFVTWASYREKQAAMGTITHDPRI
TDPLIPYQIGHNSSVPSSSMPKISD*

Transcript Sequence

Transcript ID

Solyc08g075460.3.1
Transcript Infomation

WAT1-related protein (AHRD V3.3 *** K4CMR3_SOLLC)
Sequence

TAAAGGTAGATTTATAATAATATAGAAAAAAATAAAAAGTTAAGACCAAACACTTTTGGG
AGATATTAGATGATATTTCTTGACATCGAAGGAATTGCTTTTATACTTATCCTTAAACAT
ACTTGAGAATTGCTTTTATACTAACATCGCTACTTCTTTTATGTTCGATTTTGATTTGAC
ATCGAATTTTTAAATTAAAGATAAAAAAAAGGGTTCAACAAAAGAAAATTTCCTAAAAAG
TTAACCTATAAAACTCCATCAACAAACTCTCTTGTTTGGCCTTTGGCCAATTTCAGTGAA
GGAGTAGGCAACTACAATTTTTCATCAATGTTTGGTGATAAAAGATTGAAAGACACAAAC
TCTGTAGAACAATTTGAGGTTCATACAAAAAGTTCACTCCTTTTGTCTGATTCTTGTTTT
CTTTAGATTTTAAATTCAAGATTCATCTTACCCATTATTAAACTTGGTGGACTGTATATA
GGGGGTGGGTGTGGAGTGGATGAAGTGTGAACAAAATGGAAGCAGTTGAAGATGGAAATG
GGGGTGAGATATGGAAAGCCCATGGTGCAATGGTTTTGGTACAGCTTTTCAATGGTGGTT
ACCATGTGATTACTAAAGTGGCTCTTAATGTGGGCATGAATGAAATTGTCTTCTGTTTGT
ATAGAGATCTTATTGCTATAGCTATTCTTGCCCCAATTGCCTATTTCCGTGAAAAGAGGT
CAAGGCTCCCCCTGAGTAAACGACTACTACTGTCATTCTTCATTTTAGGATTAACTGGTA
TTTTCGGTAACCAACTGTTGTTCCTTCTTGGACTTGGCTACACAAATCCGGCTTACGCTG
CTGCGTTGCAACCTGCAATACCAGTCTTTACGTTCATACTTTCTGTACTTATGGGTACAG
AAACTGCGAAGCTTCTTACTATGGAAGGTCAGGCAAAAGTTGGAGGTACCGTTGTTTGTG
TTTCTGGGGCGATTTTGATGGCTGTATTCCGTGGTACAGCGGTGTTTGGAGACGGCACAT
CAGACTTCACAGCACAGATTGAGATAAGTGCTAAGGGTCAACCAGAGCCTGCTGGATGGC
TAATGTCTAGTCTTCTGGAGTTGGGATTTGATAATTGGCACCTAGGCGTCTTATGCTTGA
TAGGAAACTGTATGTGCATGGCAGCATACATAGCTTTTCAGGCTCCAGTTTTGAGAGAAT
ACCCGGCAAGCTTAACATTGACAGCATATTCTTACCTTTTTGGCGTTATACCAATGATAG
GGACGTCATTCCTTGTGACCAATGGATCAACAGATTGGTATTTGACACAATCTGAAGTTG
GTGCTGTGTGCTATGCTGGAATTATTACATCAGCGCTGAACTATGGACTTACTACTTGGT
GCAATAAGGTTATTGGCCCTGCTTTAGTTTCTTTATACAATCCGCTTCAACCTGCTGCAA
CAGCAATTTTGTCTAGTATTTTTCTTGGGAGCGCTATTTATCTGGGAAGCATTTTGGGAG
GACTTCTCATTATAGCAGGGCTTTATTTCGTAACTTGGGCATCTTACAGAGAGAAACAGG
CAGCCATGGGAACTATAACTCATGATCCGCGGATAACGGATCCCTTAATCCCATATCAGA
TAGGACATAATTCCTCTGTTCCTTCTTCCTCAATGCCAAAGATCAGTGATTAGATGTTGC
CACAGATATCCTTTGCATGCCCTATTCTTCATGATAATGTGTAGTTCAGTGCTAAGAAGA
ATGATAAATATGTATTGCAGTCATACCTCCGTCACTCGATTATAGAGGGTTGGAACCCTG
CATTATTCGTATTCACTGCATTGGAATAGGCTGAACCCCCTACAATCTCGTTAAATTGAA
CATGGAACTCCTTATTCCAATCCGGAAACCGAAGGATTGGGGCTGACAGGTCTTTCTTAT
TATCGTTACTTGGGTTACTGTTACGTATTATTTACATAGTTTAGTCTCCAAAGCGAGCAG
CAGTAAGTTCTCTTTATGCAATGATGGGGTGATTGATATTTAAGGCTAGTTTATCAAC