Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc08g074410.3.1
CDS Infomation

tRNA synthetase (AHRD V3.3 *** C1N232_MICPC)
Sequence

ATGGAGAAAACGGAGCTGAAGGATGATAAAAGCAAAGAGGTAGAAGAGGAGCAAGTAGTG
AACCCATGGGAGGTATCAGCAAAAGACGGCGGGAAGATTGACTATGACAAATTGATCGAC
AAATTTGGTTGCCAGAGGCTTGACGAGTCGTTAATTCAGAGAGTTCAACGTCTTACGAAT
CGGGCACCTCATGTTTTCCTTCGCCGTGGAGTTTTCTTTGCTCATCGTGATTTTAATGAT
ATATTGGATTCTTATGAGAAAGGGGAGAAGTTTTATTTGTACACTGGCAGAGGACCTTCT
TCTGAAGCTTTGCATTTGGGTCATCTTATCCCTTTCATGTTTACAAAGTACTTGCAGGAT
GCTTTTAAGGTGCCGCTTGTAATACAGTTGACTGATGATGAGAAATGTATGTGGAAGAAT
TTGTCAGTGGAAGAAAGCCAAAGACTTGCTCGTGAGAATGCTAAAGACATTATTGCTTGT
GGATTTGATATTTCAAAGACGTTTATTTTCTCTGATTTTGACTATGTTGGTGGCGCCTTT
TACAAGAACATGGTCAGGGTTGCAAAATGTGTCACATACAATAAGGTTGTTGGTATTTTT
GGTTTCACAGGTGAAGATCACATTGGGAAAGTTAGTTTTCCACCAGTCCAGGCTGTGCCA
TCCTTTCCCAGTTCATTTCCTCATATCTTTGGCAATGAGAACATTCGCTGTTTGATTCCA
TGTGCCATTGACCAGGATCCATATTTCCGAATGACTCGAGATGTTGCTCCCCGGATAGGC
TATCACAAGCCTGCTTTGATTGAATCATCATTCTTTCCTGCGCTTCAGGGGGAGAATGGA
AAAATGTCTGCTAGTGATCCAAATTCTGCCATTTATGTGACTGATTCAGCAAAAGAGATA
AAAAACAAGATAAACAGATATGCATTCTCAGGTGGACGAGACTCAATTGAGTTGCATAGG
AAGTACGGAGCAAACCTGGAGGTTGATATACCATTTAAATATCTTGGCTTTTTCCTGGAC
GATGATGCAGAGATGGAACACATTAGAGAGGAGTATGGTTCGGGCCGTATGCTGACAGGT
GAAATTAAAAAGAGGCTAGTTGAAGTACTAACAGATCTAGTTGAAAGACATCGACGGGCT
AGGGCAGCAGTGACTGATGAGACAACAGAAAGATCTCAGGCAATAAAAATATCTCAGAAA
GATCTCAGGCAACAAAAAGATCTCAGATAA

Peptide Sequence

PEP ID

Solyc08g074410.3.1
PEP Infomation

tRNA synthetase (AHRD V3.3 *** C1N232_MICPC)
Sequence

MEKTELKDDKSKEVEEEQVVNPWEVSAKDGGKIDYDKLIDKFGCQRLDESLIQRVQRLTN
RAPHVFLRRGVFFAHRDFNDILDSYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQD
AFKVPLVIQLTDDEKCMWKNLSVEESQRLARENAKDIIACGFDISKTFIFSDFDYVGGAF
YKNMVRVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAVPSFPSSFPHIFGNENIRCLIP
CAIDQDPYFRMTRDVAPRIGYHKPALIESSFFPALQGENGKMSASDPNSAIYVTDSAKEI
KNKINRYAFSGGRDSIELHRKYGANLEVDIPFKYLGFFLDDDAEMEHIREEYGSGRMLTG
EIKKRLVEVLTDLVERHRRARAAVTDETTERSQAIKISQKDLRQQKDLR*

Transcript Sequence

Transcript ID

Solyc08g074410.3.1
Transcript Infomation

tRNA synthetase (AHRD V3.3 *** C1N232_MICPC)
Sequence

ACTGAGGTTTTTCACTTCTCTGAATCCAAAATCCTCAAACTCGCCGGCCTCGCCGCAAGT
CGTCGCCGGTGCCGGAAAATCATTTTGTCCCCTGAAAATCTCATTAGCTCGTAGGAAGTC
GTCGTCAATGGAGAAAACGGAGCTGAAGGATGATAAAAGCAAAGAGGTAGAAGAGGAGCA
AGTAGTGAACCCATGGGAGGTATCAGCAAAAGACGGCGGGAAGATTGACTATGACAAATT
GATCGACAAATTTGGTTGCCAGAGGCTTGACGAGTCGTTAATTCAGAGAGTTCAACGTCT
TACGAATCGGGCACCTCATGTTTTCCTTCGCCGTGGAGTTTTCTTTGCTCATCGTGATTT
TAATGATATATTGGATTCTTATGAGAAAGGGGAGAAGTTTTATTTGTACACTGGCAGAGG
ACCTTCTTCTGAAGCTTTGCATTTGGGTCATCTTATCCCTTTCATGTTTACAAAGTACTT
GCAGGATGCTTTTAAGGTGCCGCTTGTAATACAGTTGACTGATGATGAGAAATGTATGTG
GAAGAATTTGTCAGTGGAAGAAAGCCAAAGACTTGCTCGTGAGAATGCTAAAGACATTAT
TGCTTGTGGATTTGATATTTCAAAGACGTTTATTTTCTCTGATTTTGACTATGTTGGTGG
CGCCTTTTACAAGAACATGGTCAGGGTTGCAAAATGTGTCACATACAATAAGGTTGTTGG
TATTTTTGGTTTCACAGGTGAAGATCACATTGGGAAAGTTAGTTTTCCACCAGTCCAGGC
TGTGCCATCCTTTCCCAGTTCATTTCCTCATATCTTTGGCAATGAGAACATTCGCTGTTT
GATTCCATGTGCCATTGACCAGGATCCATATTTCCGAATGACTCGAGATGTTGCTCCCCG
GATAGGCTATCACAAGCCTGCTTTGATTGAATCATCATTCTTTCCTGCGCTTCAGGGGGA
GAATGGAAAAATGTCTGCTAGTGATCCAAATTCTGCCATTTATGTGACTGATTCAGCAAA
AGAGATAAAAAACAAGATAAACAGATATGCATTCTCAGGTGGACGAGACTCAATTGAGTT
GCATAGGAAGTACGGAGCAAACCTGGAGGTTGATATACCATTTAAATATCTTGGCTTTTT
CCTGGACGATGATGCAGAGATGGAACACATTAGAGAGGAGTATGGTTCGGGCCGTATGCT
GACAGGTGAAATTAAAAAGAGGCTAGTTGAAGTACTAACAGATCTAGTTGAAAGACATCG
ACGGGCTAGGGCAGCAGTGACTGATGAGACAACAGAAAGATCTCAGGCAATAAAAATATC
TCAGAAAGATCTCAGGCAACAAAAAGATCTCAGATAAAATTATTAGGATCTCAGGCATTC
GTTTAAGTGGAGCACCACAAGTATATTATCTTTTCAAATGTTTCTATTATAATTTTCATA
AGTTATTCGTTTGTTCTATTTGTGGAGCTTGAATAACATTTCTATCTATAGAGTGTATTA
AGACAAAAGAAAAATATAAAACAATTGGTGAAGAACAAAGAAACAATCAATTAAAGGAGA
AAATCTATTTGGTTTGTATATTTTTCTCCAATGCCAGATGGTTAACAAAAAAGGAAAAAA
TGAACATGTCGATACTTTTTGTTTTAATTATACAGTAACTATAGTATCTGTGAGAGAATA
ATAACGAACTTGAAAAACACACTATTAAAAATTTAAAATATGAATTCTCGGTCGACAAAG
CACTATCATTCACAAGTATTTTGATATCTTTGACTCATCTATTTACCTACCATTGTTTTT
GTTTCTTCAACCAAATAAAATGTTACTATTGTTATCAAATAGAATGTTACGCACACTTTA
TATGAAAACTAACATGCTAAAAATTAATAAAGTATATATATATAAACTCAAATATAGGAG
ATGAATGAATAATAAAACAATTCTTTATTGTTTTATAACATTTAAAAAAATTTCAGCCAA
TTAGCATTTAGTTCATATATAAACCATAATAGTAAATCATTTTTTAAATTAATAATGAAT
TTGTAAAATGGATAATGATACCGCGCGAAGCGCGGTTAAATCCACTAGTTTTTTAAT